Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_GAQ_versus_WT_NA.greenbergcls.cls
#WT_GAQ_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_GAQ
GeneSetP53_DN.V2_UP
Enrichment Score (ES)0.4619323
Normalized Enrichment Score (NES)1.2269925
Nominal p-value0.046728972
FDR q-value0.16473323
FWER p-Value0.66
Table: GSEA Results Summary



Fig 1: Enrichment plot: P53_DN.V2_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IL1RNinterleukin 1 receptor antagonist [Source:HGNC Symbol;Acc:HGNC:6000]14.9200.0571Yes
2CCL4C-C motif chemokine ligand 4 [Source:HGNC Symbol;Acc:HGNC:10630]164.7310.1117Yes
3NFKBIANFKB inhibitor alpha [Source:HGNC Symbol;Acc:HGNC:7797]1073.5700.1507Yes
4OSGIN2oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]1393.3250.1885Yes
5CD83CD83 molecule [Source:HGNC Symbol;Acc:HGNC:1703]1453.2950.2266Yes
6IER3immediate early response 3 [Source:HGNC Symbol;Acc:HGNC:5392]1503.2680.2645Yes
7TNFAIP3TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]2312.8800.2957Yes
8FOSL2FOS like 2, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:3798]3352.5090.3221Yes
9HAO1hydroxyacid oxidase 1 [Source:HGNC Symbol;Acc:HGNC:4809]3622.4430.3497Yes
10P2RY6pyrimidinergic receptor P2Y6 [Source:HGNC Symbol;Acc:HGNC:8543]4002.3590.3761Yes
11PTK2Bprotein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]6911.7740.3889Yes
12IKZF1IKAROS family zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:13176]7401.6950.4073Yes
13MMP13matrix metallopeptidase 13 [Source:HGNC Symbol;Acc:HGNC:7159]10211.4170.4161Yes
14CLCF1cardiotrophin like cytokine factor 1 [Source:HGNC Symbol;Acc:HGNC:17412]10251.4150.4325Yes
15CXCL2C-X-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:4603]10861.3740.4468Yes
16FCRL2Fc receptor like 2 [Source:HGNC Symbol;Acc:HGNC:14875]14231.1400.4510Yes
17SYN1synapsin I [Source:HGNC Symbol;Acc:HGNC:11494]14941.1060.4619Yes
18PRKCEprotein kinase C epsilon [Source:HGNC Symbol;Acc:HGNC:9401]25450.7110.4418No
19CH25Hcholesterol 25-hydroxylase [Source:HGNC Symbol;Acc:HGNC:1907]27780.6440.4430No
20MT1Gmetallothionein 1G [Source:HGNC Symbol;Acc:HGNC:7399]28500.6240.4483No
21NCKAP1LNCK associated protein 1 like [Source:HGNC Symbol;Acc:HGNC:4862]30230.5830.4504No
22H2AC4H2A clustered histone 4 [Source:HGNC Symbol;Acc:HGNC:4734]34940.4820.4433No
23TUBB1tubulin beta 1 class VI [Source:HGNC Symbol;Acc:HGNC:16257]36730.4480.4437No
24SDC4syndecan 4 [Source:HGNC Symbol;Acc:HGNC:10661]36920.4430.4483No
25ANGPTL3angiopoietin like 3 [Source:HGNC Symbol;Acc:HGNC:491]39300.4010.4466No
26EVI2Aecotropic viral integration site 2A [Source:HGNC Symbol;Acc:HGNC:3499]40640.3790.4474No
27CYP2C8cytochrome P450 family 2 subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:2622]41150.3710.4503No
28PRRG3proline rich and Gla domain 3 [Source:HGNC Symbol;Acc:HGNC:30798]43140.3370.4489No
29MPZmyelin protein zero [Source:HGNC Symbol;Acc:HGNC:7225]46910.2820.4420No
30LRRC32leucine rich repeat containing 32 [Source:HGNC Symbol;Acc:HGNC:4161]48530.2540.4406No
31SLASrc like adaptor [Source:HGNC Symbol;Acc:HGNC:10902]51580.2080.4347No
32PCDH1protocadherin 1 [Source:HGNC Symbol;Acc:HGNC:8655]53810.1730.4307No
33WNT3Wnt family member 3 [Source:HGNC Symbol;Acc:HGNC:12782]61230.0750.4116No
34SLC4A10solute carrier family 4 member 10 [Source:HGNC Symbol;Acc:HGNC:13811]62470.0580.4089No
35SARDHsarcosine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:10536]62990.0520.4081No
36KCNMB1potassium calcium-activated channel subfamily M regulatory beta subunit 1 [Source:HGNC Symbol;Acc:HGNC:6285]63080.0510.4085No
37CCL20C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619]67800.0000.3957No
38FGF22fibroblast growth factor 22 [Source:HGNC Symbol;Acc:HGNC:3679]72680.0000.3826No
39PRDM11PR/SET domain 11 [Source:HGNC Symbol;Acc:HGNC:13996]73140.0000.3813No
40PPEF1protein phosphatase with EF-hand domain 1 [Source:HGNC Symbol;Acc:HGNC:9243]73680.0000.3799No
41C4BPAcomplement component 4 binding protein alpha [Source:HGNC Symbol;Acc:HGNC:1325]75740.0000.3744No
42PKD2L1polycystin 2 like 1, transient receptor potential cation channel [Source:HGNC Symbol;Acc:HGNC:9011]81700.0000.3583No
43GUCY2Dguanylate cyclase 2D, retinal [Source:HGNC Symbol;Acc:HGNC:4689]87280.0000.3432No
44GPA33glycoprotein A33 [Source:HGNC Symbol;Acc:HGNC:4445]88480.0000.3400No
45BARX2BARX homeobox 2 [Source:HGNC Symbol;Acc:HGNC:956]89260.0000.3379No
46CDH4cadherin 4 [Source:HGNC Symbol;Acc:HGNC:1763]97710.0000.3150No
47CLEC1AC-type lectin domain family 1 member A [Source:HGNC Symbol;Acc:HGNC:24355]97990.0000.3143No
48TNFRSF9TNF receptor superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11924]101080.0000.3060No
49KCNK3potassium two pore domain channel subfamily K member 3 [Source:HGNC Symbol;Acc:HGNC:6278]101480.0000.3049No
50ADAM12ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]102360.0000.3026No
51HS3ST2heparan sulfate-glucosamine 3-sulfotransferase 2 [Source:HGNC Symbol;Acc:HGNC:5195]103070.0000.3007No
52APOL3apolipoprotein L3 [Source:HGNC Symbol;Acc:HGNC:14868]103780.0000.2988No
53GSC2goosecoid homeobox 2 [Source:HGNC Symbol;Acc:HGNC:4613]104600.0000.2966No
54SPRR2Csmall proline rich protein 2C (pseudogene) [Source:HGNC Symbol;Acc:HGNC:11263]104840.0000.2959No
55SPRR1Bsmall proline rich protein 1B [Source:HGNC Symbol;Acc:HGNC:11260]104930.0000.2957No
56CYP2D6cytochrome P450 family 2 subfamily D member 6 [Source:HGNC Symbol;Acc:HGNC:2625]106110.0000.2926No
57IL1RAPL1interleukin 1 receptor accessory protein like 1 [Source:HGNC Symbol;Acc:HGNC:5996]106970.0000.2903No
58RFPL2ret finger protein like 2 [Source:HGNC Symbol;Acc:HGNC:9979]108140.0000.2871No
59NTRK3neurotrophic receptor tyrosine kinase 3 [Source:HGNC Symbol;Acc:HGNC:8033]112200.0000.2762No
60GYPBglycophorin B (MNS blood group) [Source:HGNC Symbol;Acc:HGNC:4703]121050.0000.2522No
61NTSR1neurotensin receptor 1 [Source:HGNC Symbol;Acc:HGNC:8039]121120.0000.2521No
62LGSNlengsin, lens protein with glutamine synthetase domain [Source:HGNC Symbol;Acc:HGNC:21016]123640.0000.2453No
63PTX3pentraxin 3 [Source:HGNC Symbol;Acc:HGNC:9692]125780.0000.2395No
64TNRtenascin R [Source:HGNC Symbol;Acc:HGNC:11953]128850.0000.2312No
65AVPR2arginine vasopressin receptor 2 [Source:HGNC Symbol;Acc:HGNC:897]129250.0000.2302No
66PCDHA6protocadherin alpha 6 [Source:HGNC Symbol;Acc:HGNC:8672]141580.0000.1968No
67ANXA10annexin A10 [Source:HGNC Symbol;Acc:HGNC:534]144850.0000.1880No
68TNNI3KTNNI3 interacting kinase [Source:HGNC Symbol;Acc:HGNC:19661]146370.0000.1839No
69SPINK1serine peptidase inhibitor Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]155800.0000.1584No
70HTR1E5-hydroxytryptamine receptor 1E [Source:HGNC Symbol;Acc:HGNC:5291]157160.0000.1548No
71BPIbactericidal permeability increasing protein [Source:HGNC Symbol;Acc:HGNC:1095]157380.0000.1542No
72IL36Ainterleukin 36 alpha [Source:HGNC Symbol;Acc:HGNC:15562]157590.0000.1536No
73CA3carbonic anhydrase 3 [Source:HGNC Symbol;Acc:HGNC:1374]158370.0000.1516No
74AMELXamelogenin X-linked [Source:HGNC Symbol;Acc:HGNC:461]161030.0000.1444No
75FPR3formyl peptide receptor 3 [Source:HGNC Symbol;Acc:HGNC:3828]162030.0000.1417No
76RNF39ring finger protein 39 [Source:HGNC Symbol;Acc:HGNC:18064]166220.0000.1304No
77GP5glycoprotein V platelet [Source:HGNC Symbol;Acc:HGNC:4443]171800.0000.1153No
78SLC38A3solute carrier family 38 member 3 [Source:HGNC Symbol;Acc:HGNC:18044]175940.0000.1041No
79CEACAM5CEA cell adhesion molecule 5 [Source:HGNC Symbol;Acc:HGNC:1817]179110.0000.0956No
80DPYSdihydropyrimidinase [Source:HGNC Symbol;Acc:HGNC:3013]180990.0000.0905No
81CHST8carbohydrate sulfotransferase 8 [Source:HGNC Symbol;Acc:HGNC:15993]181250.0000.0898No
82BFSP2beaded filament structural protein 2 [Source:HGNC Symbol;Acc:HGNC:1041]182160.0000.0874No
83CXCL12C-X-C motif chemokine ligand 12 [Source:HGNC Symbol;Acc:HGNC:10672]189100.0000.0687No
84MOGmyelin oligodendrocyte glycoprotein [Source:HGNC Symbol;Acc:HGNC:7197]189950.0000.0664No
85MMP3matrix metallopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:7173]190910.0000.0638No
86CXCL6C-X-C motif chemokine ligand 6 [Source:HGNC Symbol;Acc:HGNC:10643]194250.0000.0548No
87CXCL8C-X-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:6025]194290.0000.0547No
88CXCL1C-X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:4602]194380.0000.0545No
89CXCL5C-X-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10642]194400.0000.0545No
90CYP17A1cytochrome P450 family 17 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:2593]197450.0000.0462No
91CHRNA10cholinergic receptor nicotinic alpha 10 subunit [Source:HGNC Symbol;Acc:HGNC:13800]197480.0000.0462No
92PDCphosducin [Source:HGNC Symbol;Acc:HGNC:8759]199190.0000.0416No
93PYYpeptide YY [Source:HGNC Symbol;Acc:HGNC:9748]201140.0000.0363No
94RGRretinal G protein coupled receptor [Source:HGNC Symbol;Acc:HGNC:9990]204920.0000.0261No
95RHDRh blood group D antigen [Source:HGNC Symbol;Acc:HGNC:10009]205000.0000.0259No
96CACNG2calcium voltage-gated channel auxiliary subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:1406]205970.0000.0233No
97MMP17matrix metallopeptidase 17 [Source:HGNC Symbol;Acc:HGNC:7163]208600.0000.0162No
98TPTEtransmembrane phosphatase with tensin homology [Source:HGNC Symbol;Acc:HGNC:12023]210130.0000.0121No
99P2RY11purinergic receptor P2Y11 [Source:HGNC Symbol;Acc:HGNC:8540]213700.0000.0025No
100SLC15A2solute carrier family 15 member 2 [Source:HGNC Symbol;Acc:HGNC:10921]218180.000-0.0096No
101INSL3insulin like 3 [Source:HGNC Symbol;Acc:HGNC:6086]218540.000-0.0106No
102INSL4insulin like 4 [Source:HGNC Symbol;Acc:HGNC:6087]218570.000-0.0106No
103KRT31keratin 31 [Source:HGNC Symbol;Acc:HGNC:6448]219490.000-0.0131No
104KRT14keratin 14 [Source:HGNC Symbol;Acc:HGNC:6416]219940.000-0.0143No
105H1-6H1.6 linker histone, cluster member [Source:HGNC Symbol;Acc:HGNC:4720]227730.000-0.0353No
106CTLA4cytotoxic T-lymphocyte associated protein 4 [Source:HGNC Symbol;Acc:HGNC:2505]227870.000-0.0357No
107CD69CD69 molecule [Source:HGNC Symbol;Acc:HGNC:1694]230920.000-0.0439No
108FOXL2forkhead box L2 [Source:HGNC Symbol;Acc:HGNC:1092]235890.000-0.0573No
109CYP2A13cytochrome P450 family 2 subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:2608]236810.000-0.0598No
110EVX1even-skipped homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3506]237250.000-0.0610No
111LALBAlactalbumin alpha [Source:HGNC Symbol;Acc:HGNC:6480]239910.000-0.0681No
112PRTN3proteinase 3 [Source:HGNC Symbol;Acc:HGNC:9495]256630.000-0.1134No
113RIPK4receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]257820.000-0.1166No
114OR10H3olfactory receptor family 10 subfamily H member 3 [Source:HGNC Symbol;Acc:HGNC:8174]257910.000-0.1168No
115POU2AF1POU class 2 homeobox associating factor 1 [Source:HGNC Symbol;Acc:HGNC:9211]264560.000-0.1347No
116MAGEC2MAGE family member C2 [Source:HGNC Symbol;Acc:HGNC:13574]267180.000-0.1418No
117PF4V1platelet factor 4 variant 1 [Source:HGNC Symbol;Acc:HGNC:8862]271110.000-0.1524No
118XAF1XIAP associated factor 1 [Source:HGNC Symbol;Acc:HGNC:30932]272520.000-0.1562No
119RELBRELB proto-oncogene, NF-kB subunit [Source:HGNC Symbol;Acc:HGNC:9956]27645-0.027-0.1665No
120ME3malic enzyme 3 [Source:HGNC Symbol;Acc:HGNC:6985]27673-0.030-0.1669No
121ATP12AATPase H+/K+ transporting non-gastric alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:13816]27851-0.052-0.1711No
122DLX6distal-less homeobox 6 [Source:HGNC Symbol;Acc:HGNC:2919]28111-0.082-0.1771No
123SLC16A4solute carrier family 16 member 4 [Source:HGNC Symbol;Acc:HGNC:10925]28323-0.110-0.1816No
124RORCRAR related orphan receptor C [Source:HGNC Symbol;Acc:HGNC:10260]28846-0.169-0.1937No
125OSGIN1oxidative stress induced growth inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:30093]28923-0.181-0.1937No
126TP53tumor protein p53 [Source:HGNC Symbol;Acc:HGNC:11998]29665-0.274-0.2106No
127CNOT9CCR4-NOT transcription complex subunit 9 [Source:HGNC Symbol;Acc:HGNC:10445]30166-0.333-0.2202No
128CD5LCD5 molecule like [Source:HGNC Symbol;Acc:HGNC:1690]30781-0.420-0.2320No
129INPP5Dinositol polyphosphate-5-phosphatase D [Source:HGNC Symbol;Acc:HGNC:6079]31473-0.525-0.2446No
130BAXBCL2 associated X, apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:959]31502-0.531-0.2392No
131PIDD1p53-induced death domain protein 1 [Source:HGNC Symbol;Acc:HGNC:16491]31528-0.536-0.2336No
132TDRKHtudor and KH domain containing [Source:HGNC Symbol;Acc:HGNC:11713]31611-0.551-0.2294No
133ITM2Aintegral membrane protein 2A [Source:HGNC Symbol;Acc:HGNC:6173]31901-0.593-0.2304No
134RFX2regulatory factor X2 [Source:HGNC Symbol;Acc:HGNC:9983]31955-0.604-0.2248No
135CD68CD68 molecule [Source:HGNC Symbol;Acc:HGNC:1693]33550-0.985-0.2565No
136NF1neurofibromin 1 [Source:HGNC Symbol;Acc:HGNC:7765]34002-1.115-0.2558No
137FZD9frizzled class receptor 9 [Source:HGNC Symbol;Acc:HGNC:4047]34070-1.136-0.2444No
138POU6F1POU class 6 homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9224]34591-1.328-0.2430No
139H6PDhexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4795]35547-1.817-0.2478No
140EML3EMAP like 3 [Source:HGNC Symbol;Acc:HGNC:26666]36005-2.153-0.2351No
141ETV5ETS variant transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:3494]36025-2.171-0.2104No
142DPF1double PHD fingers 1 [Source:HGNC Symbol;Acc:HGNC:20225]36074-2.210-0.1861No
143ANGPTL4angiopoietin like 4 [Source:HGNC Symbol;Acc:HGNC:16039]36327-2.453-0.1644No
144GALK1galactokinase 1 [Source:HGNC Symbol;Acc:HGNC:4118]36360-2.496-0.1363No
145NFIXnuclear factor I X [Source:HGNC Symbol;Acc:HGNC:7788]36810-3.198-0.1113No
146ALOX5AParachidonate 5-lipoxygenase activating protein [Source:HGNC Symbol;Acc:HGNC:436]36826-3.238-0.0741No
147RND2Rho family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:18315]36864-3.329-0.0364No
148TFAP4transcription factor AP-4 [Source:HGNC Symbol;Acc:HGNC:11745]36954-3.6620.0037No
Table: GSEA details [plain text format]



Fig 2: P53_DN.V2_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: P53_DN.V2_UP: Random ES distribution   
Gene set null distribution of ES for P53_DN.V2_UP