Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_GAQ_versus_WT_NA.greenbergcls.cls
#WT_GAQ_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_GAQ
GeneSetRELA_DN.V1_UP
Enrichment Score (ES)0.441146
Normalized Enrichment Score (NES)1.1886916
Nominal p-value0.03125
FDR q-value0.18665734
FWER p-Value0.778
Table: GSEA Results Summary



Fig 1: Enrichment plot: RELA_DN.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IL1Binterleukin 1 beta [Source:HGNC Symbol;Acc:HGNC:5992]04.9250.0400Yes
2PTGS2prostaglandin-endoperoxide synthase 2 [Source:HGNC Symbol;Acc:HGNC:9605]34.9070.0797Yes
3TNCtenascin C [Source:HGNC Symbol;Acc:HGNC:5318]74.8460.1190Yes
4FOSL1FOS like 1, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:13718]204.6800.1566Yes
5GADD45Bgrowth arrest and DNA damage inducible beta [Source:HGNC Symbol;Acc:HGNC:4096]234.5860.1938Yes
6ZFP36ZFP36 ring finger protein [Source:HGNC Symbol;Acc:HGNC:12862]354.3690.2289Yes
7JUNBJunB proto-oncogene, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:6205]1253.4240.2543Yes
8FOSBFosB proto-oncogene, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:3797]1603.2370.2796Yes
9GRAPGRB2 related adaptor protein [Source:HGNC Symbol;Acc:HGNC:4562]1703.1710.3051Yes
10ATF3activating transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:785]4962.1020.3134Yes
11SLC7A1solute carrier family 7 member 1 [Source:HGNC Symbol;Acc:HGNC:11057]5152.0550.3296Yes
12F9coagulation factor IX [Source:HGNC Symbol;Acc:HGNC:3551]7541.6800.3368Yes
13MYBPC3myosin binding protein C3 [Source:HGNC Symbol;Acc:HGNC:7551]7591.6750.3502Yes
14TREX1three prime repair exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:12269]7931.6370.3626Yes
15AGPAT41-acylglycerol-3-phosphate O-acyltransferase 4 [Source:HGNC Symbol;Acc:HGNC:20885]8581.5580.3735Yes
16BPNT13'(2'), 5'-bisphosphate nucleotidase 1 [Source:HGNC Symbol;Acc:HGNC:1096]9321.4940.3837Yes
17EGR3early growth response 3 [Source:HGNC Symbol;Acc:HGNC:3240]9661.4610.3946Yes
18ATP2A1ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:HGNC Symbol;Acc:HGNC:811]9761.4460.4061Yes
19SAMSN1SAM domain, SH3 domain and nuclear localization signals 1 [Source:HGNC Symbol;Acc:HGNC:10528]9851.4410.4176Yes
20TANKTRAF family member associated NFKB activator [Source:HGNC Symbol;Acc:HGNC:11562]10291.4130.4279Yes
21PAFAH1B2platelet activating factor acetylhydrolase 1b catalytic subunit 2 [Source:HGNC Symbol;Acc:HGNC:8575]11421.3300.4357Yes
22RNF25ring finger protein 25 [Source:HGNC Symbol;Acc:HGNC:14662]13571.1750.4394Yes
23EGR1early growth response 1 [Source:HGNC Symbol;Acc:HGNC:3238]17231.0150.4378Yes
24DUSP8dual specificity phosphatase 8 [Source:HGNC Symbol;Acc:HGNC:3074]20450.8790.4362Yes
25FOSFos proto-oncogene, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:3796]23880.7570.4331Yes
26NLKnemo like kinase [Source:HGNC Symbol;Acc:HGNC:29858]25660.7030.4340Yes
27INTS6integrator complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14879]26900.6640.4361Yes
28GPR85G protein-coupled receptor 85 [Source:HGNC Symbol;Acc:HGNC:4536]27020.6620.4411Yes
29PPP1R15Aprotein phosphatase 1 regulatory subunit 15A [Source:HGNC Symbol;Acc:HGNC:14375]29640.5980.4389No
30RREB1ras responsive element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:10449]34590.4870.4295No
31JUNJun proto-oncogene, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:6204]34900.4830.4326No
32FGF17fibroblast growth factor 17 [Source:HGNC Symbol;Acc:HGNC:3673]34920.4830.4365No
33RIPK1receptor interacting serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:10019]37220.4360.4339No
34KLF6Kruppel like factor 6 [Source:HGNC Symbol;Acc:HGNC:2235]39110.4050.4320No
35SNAPC1small nuclear RNA activating complex polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:11134]39420.3980.4345No
36ZFP37ZFP37 zinc finger protein [Source:HGNC Symbol;Acc:HGNC:12863]45450.3010.4206No
37F3coagulation factor III, tissue factor [Source:HGNC Symbol;Acc:HGNC:3541]48440.2550.4146No
38MC3Rmelanocortin 3 receptor [Source:HGNC Symbol;Acc:HGNC:6931]51980.2010.4067No
39KDM5Dlysine demethylase 5D [Source:HGNC Symbol;Acc:HGNC:11115]52380.1960.4072No
40ZNF222zinc finger protein 222 [Source:HGNC Symbol;Acc:HGNC:13015]52630.1910.4081No
41KMOkynurenine 3-monooxygenase [Source:HGNC Symbol;Acc:HGNC:6381]53380.1800.4076No
42USP9Yubiquitin specific peptidase 9 Y-linked [Source:HGNC Symbol;Acc:HGNC:12633]57500.1220.3975No
43VDRvitamin D receptor [Source:HGNC Symbol;Acc:HGNC:12679]58630.1050.3953No
44ADAMTS13ADAM metallopeptidase with thrombospondin type 1 motif 13 [Source:HGNC Symbol;Acc:HGNC:1366]61800.0660.3873No
45FGF2fibroblast growth factor 2 [Source:HGNC Symbol;Acc:HGNC:3676]64930.0300.3791No
46LAMC2laminin subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:6493]66630.0050.3745No
47LHCGRluteinizing hormone/choriogonadotropin receptor [Source:HGNC Symbol;Acc:HGNC:6585]68150.0000.3704No
48SCG5secretogranin V [Source:HGNC Symbol;Acc:HGNC:10816]69190.0000.3676No
49FXYD7FXYD domain containing ion transport regulator 7 [Source:HGNC Symbol;Acc:HGNC:4034]70190.0000.3650No
50APOBapolipoprotein B [Source:HGNC Symbol;Acc:HGNC:603]72010.0000.3601No
51PRDM11PR/SET domain 11 [Source:HGNC Symbol;Acc:HGNC:13996]73140.0000.3570No
52PRKG1protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]74030.0000.3547No
53DEPP1DEPP1 autophagy regulator [Source:HGNC Symbol;Acc:HGNC:23355]84450.0000.3265No
54TNFRSF9TNF receptor superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11924]101080.0000.2815No
55CELPcarboxyl ester lipase pseudogene [Source:HGNC Symbol;Acc:HGNC:1849]101120.0000.2814No
56KCNQ4potassium voltage-gated channel subfamily Q member 4 [Source:HGNC Symbol;Acc:HGNC:6298]101660.0000.2800No
57DNMT3LDNA methyltransferase 3 like [Source:HGNC Symbol;Acc:HGNC:2980]109670.0000.2583No
58SLC27A6solute carrier family 27 member 6 [Source:HGNC Symbol;Acc:HGNC:11000]111900.0000.2523No
59MS4A3membrane spanning 4-domains A3 [Source:HGNC Symbol;Acc:HGNC:7317]113320.0000.2485No
60SLC6A14solute carrier family 6 member 14 [Source:HGNC Symbol;Acc:HGNC:11047]120890.0000.2280No
61ESM1endothelial cell specific molecule 1 [Source:HGNC Symbol;Acc:HGNC:3466]121370.0000.2267No
62PODXL2podocalyxin like 2 [Source:HGNC Symbol;Acc:HGNC:17936]125420.0000.2158No
63DYSFdysferlin [Source:HGNC Symbol;Acc:HGNC:3097]126280.0000.2135No
64CDKN2Bcyclin dependent kinase inhibitor 2B [Source:HGNC Symbol;Acc:HGNC:1788]128770.0000.2068No
65LILRP2leukocyte immunoglobulin-like receptor pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:15497]132090.0000.1978No
66TLX1T cell leukemia homeobox 1 [Source:HGNC Symbol;Acc:HGNC:5056]145010.0000.1629No
67INE1inactivation escape 1 [Source:HGNC Symbol;Acc:HGNC:6060]149740.0000.1501No
68GHRHgrowth hormone releasing hormone [Source:HGNC Symbol;Acc:HGNC:4265]152860.0000.1417No
69ULBP2UL16 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:14894]153140.0000.1410No
70TRIM38tripartite motif containing 38 [Source:HGNC Symbol;Acc:HGNC:10059]154880.0000.1363No
71GLYATglycine-N-acyltransferase [Source:HGNC Symbol;Acc:HGNC:13734]155920.0000.1335No
72HTR1F5-hydroxytryptamine receptor 1F [Source:HGNC Symbol;Acc:HGNC:5292]157180.0000.1301No
73XCL1X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:10645]159780.0000.1231No
74RNF39ring finger protein 39 [Source:HGNC Symbol;Acc:HGNC:18064]166220.0000.1057No
75MAKmale germ cell associated kinase [Source:HGNC Symbol;Acc:HGNC:6816]188870.0000.0444No
76CDHR5cadherin related family member 5 [Source:HGNC Symbol;Acc:HGNC:7521]191030.0000.0386No
77NTSneurotensin [Source:HGNC Symbol;Acc:HGNC:8038]194050.0000.0304No
78FLRT1fibronectin leucine rich transmembrane protein 1 [Source:HGNC Symbol;Acc:HGNC:3760]198650.0000.0180No
79PIPprolactin induced protein [Source:HGNC Symbol;Acc:HGNC:8993]199760.0000.0150No
80GJB1gap junction protein beta 1 [Source:HGNC Symbol;Acc:HGNC:4283]209290.000-0.0107No
81P2RY11purinergic receptor P2Y11 [Source:HGNC Symbol;Acc:HGNC:8540]213700.000-0.0226No
82CCL2C-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:10618]229270.000-0.0648No
83CD38CD38 molecule [Source:HGNC Symbol;Acc:HGNC:1667]230120.000-0.0670No
84ZNF165zinc finger protein 165 [Source:HGNC Symbol;Acc:HGNC:12953]231420.000-0.0705No
85MEP1Bmeprin A subunit beta [Source:HGNC Symbol;Acc:HGNC:7020]232710.000-0.0740No
86NOL4nucleolar protein 4 [Source:HGNC Symbol;Acc:HGNC:7870]233420.000-0.0759No
87DEFB1defensin beta 1 [Source:HGNC Symbol;Acc:HGNC:2766]234900.000-0.0799No
88PNLIPRP1pancreatic lipase related protein 1 [Source:HGNC Symbol;Acc:HGNC:9156]237280.000-0.0863No
89KCNJ16potassium inwardly rectifying channel subfamily J member 16 [Source:HGNC Symbol;Acc:HGNC:6262]238990.000-0.0909No
90CDK5R2cyclin dependent kinase 5 regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:1776]239490.000-0.0922No
91DLGAP1DLG associated protein 1 [Source:HGNC Symbol;Acc:HGNC:2905]240870.000-0.0959No
92CRB1crumbs cell polarity complex component 1 [Source:HGNC Symbol;Acc:HGNC:2343]241070.000-0.0964No
93HOOK1hook microtubule tethering protein 1 [Source:HGNC Symbol;Acc:HGNC:19884]243710.000-0.1036No
94CLDN15claudin 15 [Source:HGNC Symbol;Acc:HGNC:2036]247200.000-0.1130No
95CST5cystatin D [Source:HGNC Symbol;Acc:HGNC:2477]247340.000-0.1133No
96FHL5four and a half LIM domains 5 [Source:HGNC Symbol;Acc:HGNC:17371]258380.000-0.1432No
97MAGEB4MAGE family member B4 [Source:HGNC Symbol;Acc:HGNC:6811]267060.000-0.1667No
98DGKIdiacylglycerol kinase iota [Source:HGNC Symbol;Acc:HGNC:2855]272070.000-0.1802No
99KCNA1potassium voltage-gated channel subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:6218]27633-0.025-0.1915No
100THBDthrombomodulin [Source:HGNC Symbol;Acc:HGNC:11784]27809-0.047-0.1958No
101APBA2amyloid beta precursor protein binding family A member 2 [Source:HGNC Symbol;Acc:HGNC:579]27917-0.062-0.1982No
102AP4E1adaptor related protein complex 4 subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:573]28075-0.076-0.2019No
103CYP26B1cytochrome P450 family 26 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:20581]28085-0.078-0.2015No
104GAD1glutamate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:4092]28217-0.097-0.2042No
105PPANpeter pan homolog [Source:HGNC Symbol;Acc:HGNC:9227]28224-0.098-0.2036No
106BCO1beta-carotene oxygenase 1 [Source:HGNC Symbol;Acc:HGNC:13815]28242-0.101-0.2033No
107CTF1cardiotrophin 1 [Source:HGNC Symbol;Acc:HGNC:2499]28335-0.112-0.2048No
108PDE5Aphosphodiesterase 5A [Source:HGNC Symbol;Acc:HGNC:8784]28419-0.121-0.2061No
109VEGFAvascular endothelial growth factor A [Source:HGNC Symbol;Acc:HGNC:12680]28797-0.162-0.2150No
110CLK1CDC like kinase 1 [Source:HGNC Symbol;Acc:HGNC:2068]28831-0.167-0.2145No
111ATP8A2ATPase phospholipid transporting 8A2 [Source:HGNC Symbol;Acc:HGNC:13533]28987-0.189-0.2172No
112WASLWASP like actin nucleation promoting factor [Source:HGNC Symbol;Acc:HGNC:12735]29503-0.252-0.2291No
113ZNF286Azinc finger protein 286A [Source:HGNC Symbol;Acc:HGNC:13501]29539-0.258-0.2280No
114TEX14testis expressed 14, intercellular bridge forming factor [Source:HGNC Symbol;Acc:HGNC:11737]29756-0.283-0.2315No
115SIRT4sirtuin 4 [Source:HGNC Symbol;Acc:HGNC:14932]29814-0.290-0.2307No
116SRCAPSnf2 related CREBBP activator protein [Source:HGNC Symbol;Acc:HGNC:16974]30014-0.315-0.2335No
117SNAI1snail family transcriptional repressor 1 [Source:HGNC Symbol;Acc:HGNC:11128]30035-0.316-0.2315No
118PGGT1Bprotein geranylgeranyltransferase type I subunit beta [Source:HGNC Symbol;Acc:HGNC:8895]30524-0.382-0.2416No
119ZNHIT2zinc finger HIT-type containing 2 [Source:HGNC Symbol;Acc:HGNC:1177]30545-0.385-0.2390No
120WRNIP1WRN helicase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:20876]30597-0.392-0.2372No
121ZNF324zinc finger protein 324 [Source:HGNC Symbol;Acc:HGNC:14096]30800-0.423-0.2393No
122PEX6peroxisomal biogenesis factor 6 [Source:HGNC Symbol;Acc:HGNC:8859]30816-0.425-0.2362No
123P2RY10P2Y receptor family member 10 [Source:HGNC Symbol;Acc:HGNC:19906]30925-0.440-0.2356No
124LMO7LIM domain 7 [Source:HGNC Symbol;Acc:HGNC:6646]30930-0.441-0.2321No
125CRYGAcrystallin gamma A [Source:HGNC Symbol;Acc:HGNC:2408]31020-0.457-0.2308No
126TPMTthiopurine S-methyltransferase [Source:HGNC Symbol;Acc:HGNC:12014]31676-0.560-0.2440No
127GNRH1gonadotropin releasing hormone 1 [Source:HGNC Symbol;Acc:HGNC:4419]32953-0.829-0.2718No
128KMT2Dlysine methyltransferase 2D [Source:HGNC Symbol;Acc:HGNC:7133]33110-0.869-0.2690No
129MTMR11myotubularin related protein 11 [Source:HGNC Symbol;Acc:HGNC:24307]33134-0.875-0.2625No
130GPTglutamic--pyruvic transaminase [Source:HGNC Symbol;Acc:HGNC:4552]33443-0.958-0.2631No
131FZD9frizzled class receptor 9 [Source:HGNC Symbol;Acc:HGNC:4047]34070-1.136-0.2708No
132ETFDHelectron transfer flavoprotein dehydrogenase [Source:HGNC Symbol;Acc:HGNC:3483]34085-1.141-0.2619No
133BIN1bridging integrator 1 [Source:HGNC Symbol;Acc:HGNC:1052]34705-1.376-0.2675No
134ATP5F1CATP synthase F1 subunit gamma [Source:HGNC Symbol;Acc:HGNC:833]34718-1.384-0.2566No
135EFNA1ephrin A1 [Source:HGNC Symbol;Acc:HGNC:3221]35026-1.531-0.2525No
136SIRPB1signal regulatory protein beta 1 [Source:HGNC Symbol;Acc:HGNC:15928]35103-1.571-0.2418No
137DAPP1dual adaptor of phosphotyrosine and 3-phosphoinositides 1 [Source:HGNC Symbol;Acc:HGNC:16500]35162-1.604-0.2304No
138KCNC4potassium voltage-gated channel subfamily C member 4 [Source:HGNC Symbol;Acc:HGNC:6236]35499-1.790-0.2249No
139NFICnuclear factor I C [Source:HGNC Symbol;Acc:HGNC:7786]35878-2.062-0.2184No
140LGMNlegumain [Source:HGNC Symbol;Acc:HGNC:9472]35984-2.141-0.2039No
141ZFP36L1ZFP36 ring finger protein like 1 [Source:HGNC Symbol;Acc:HGNC:1107]36144-2.276-0.1897No
142GLS2glutaminase 2 [Source:HGNC Symbol;Acc:HGNC:29570]36146-2.277-0.1713No
143NOVA1NOVA alternative splicing regulator 1 [Source:HGNC Symbol;Acc:HGNC:7886]36309-2.432-0.1559No
144GAS7growth arrest specific 7 [Source:HGNC Symbol;Acc:HGNC:4169]36536-2.732-0.1399No
145CHST1carbohydrate sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:1969]36882-3.388-0.1217No
146KLF10Kruppel like factor 10 [Source:HGNC Symbol;Acc:HGNC:11810]36885-3.397-0.0942No
147PDK1pyruvate dehydrogenase kinase 1 [Source:HGNC Symbol;Acc:HGNC:8809]37005-3.887-0.0659No
148VEGFBvascular endothelial growth factor B [Source:HGNC Symbol;Acc:HGNC:12681]37033-4.057-0.0337No
149GPR183G protein-coupled receptor 183 [Source:HGNC Symbol;Acc:HGNC:3128]37068-4.3440.0006No
Table: GSEA details [plain text format]



Fig 2: RELA_DN.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: RELA_DN.V1_UP: Random ES distribution   
Gene set null distribution of ES for RELA_DN.V1_UP