Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.greenbergcls.cls #WT_GAQ_versus_WT_NA.greenbergcls.cls #WT_GAQ_versus_WT_NA_repos |
| Phenotype | greenbergcls.cls#WT_GAQ_versus_WT_NA_repos |
| Upregulated in class | WT_NA |
| GeneSet | DESCARTES_FETAL_CEREBRUM_INHIBITORY_NEURONS |
| Enrichment Score (ES) | -0.7739189 |
| Normalized Enrichment Score (NES) | -1.5165206 |
| Nominal p-value | 0.009222661 |
| FDR q-value | 0.020046715 |
| FWER p-Value | 0.426 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | HMGB1P47 | high mobility group box 1 pseudogene 47 [Source:HGNC Symbol;Acc:HGNC:39280] | 4433 | 0.318 | -0.0803 | No |
| 2 | SCGN | secretagogin, EF-hand calcium binding protein [Source:HGNC Symbol;Acc:HGNC:16941] | 6908 | 0.000 | -0.1471 | No |
| 3 | SLCO6A1 | solute carrier organic anion transporter family member 6A1 [Source:HGNC Symbol;Acc:HGNC:23613] | 7298 | 0.000 | -0.1576 | No |
| 4 | LINC01305 | long intergenic non-protein coding RNA 1305 [Source:HGNC Symbol;Acc:HGNC:27690] | 7396 | 0.000 | -0.1602 | No |
| 5 | LINC01324 | long intergenic non-protein coding RNA 1324 [Source:HGNC Symbol;Acc:HGNC:50530] | 7415 | 0.000 | -0.1607 | No |
| 6 | SHOX | short stature homeobox [Source:HGNC Symbol;Acc:HGNC:10853] | 8507 | 0.000 | -0.1902 | No |
| 7 | TFAP2B | transcription factor AP-2 beta [Source:HGNC Symbol;Acc:HGNC:11743] | 8550 | 0.000 | -0.1913 | No |
| 8 | TFAP2D | transcription factor AP-2 delta [Source:HGNC Symbol;Acc:HGNC:15581] | 8552 | 0.000 | -0.1913 | No |
| 9 | SIM1 | SIM bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:10882] | 8714 | 0.000 | -0.1957 | No |
| 10 | LINC01210 | long intergenic non-protein coding RNA 1210 [Source:HGNC Symbol;Acc:HGNC:49642] | 8923 | 0.000 | -0.2013 | No |
| 11 | GPR6 | G protein-coupled receptor 6 [Source:HGNC Symbol;Acc:HGNC:4515] | 9752 | 0.000 | -0.2236 | No |
| 12 | PTCHD4 | patched domain containing 4 [Source:HGNC Symbol;Acc:HGNC:21345] | 9888 | 0.000 | -0.2273 | No |
| 13 | NNMT | nicotinamide N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:7861] | 12512 | 0.000 | -0.2981 | No |
| 14 | DMBX1 | diencephalon/mesencephalon homeobox 1 [Source:HGNC Symbol;Acc:HGNC:19026] | 12720 | 0.000 | -0.3037 | No |
| 15 | SYNPR | synaptoporin [Source:HGNC Symbol;Acc:HGNC:16507] | 12943 | 0.000 | -0.3097 | No |
| 16 | RELN | reelin [Source:HGNC Symbol;Acc:HGNC:9957] | 14017 | 0.000 | -0.3386 | No |
| 17 | CLRN1-AS1 | CLRN1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:30895] | 14063 | 0.000 | -0.3398 | No |
| 18 | LINC02487 | long intergenic non-protein coding RNA 2487 [Source:HGNC Symbol;Acc:HGNC:53466] | 14825 | 0.000 | -0.3604 | No |
| 19 | SYTL5 | synaptotagmin like 5 [Source:HGNC Symbol;Acc:HGNC:15589] | 14962 | 0.000 | -0.3641 | No |
| 20 | PAX2 | paired box 2 [Source:HGNC Symbol;Acc:HGNC:8616] | 14996 | 0.000 | -0.3649 | No |
| 21 | HTR4 | 5-hydroxytryptamine receptor 4 [Source:HGNC Symbol;Acc:HGNC:5299] | 15652 | 0.000 | -0.3826 | No |
| 22 | AC010478.1 | novel transcript, antisense to ISL1 | 15671 | 0.000 | -0.3831 | No |
| 23 | CCK | cholecystokinin [Source:HGNC Symbol;Acc:HGNC:1569] | 15866 | 0.000 | -0.3883 | No |
| 24 | DLX2 | distal-less homeobox 2 [Source:HGNC Symbol;Acc:HGNC:2915] | 16846 | 0.000 | -0.4148 | No |
| 25 | DLX5 | distal-less homeobox 5 [Source:HGNC Symbol;Acc:HGNC:2918] | 16849 | 0.000 | -0.4148 | No |
| 26 | AL591368.1 | novel transcript | 17772 | 0.000 | -0.4397 | No |
| 27 | DRD3 | dopamine receptor D3 [Source:HGNC Symbol;Acc:HGNC:3024] | 18485 | 0.000 | -0.4589 | No |
| 28 | TAC3 | tachykinin precursor 3 [Source:HGNC Symbol;Acc:HGNC:11521] | 19039 | 0.000 | -0.4739 | No |
| 29 | BMP3 | bone morphogenetic protein 3 [Source:HGNC Symbol;Acc:HGNC:1070] | 19062 | 0.000 | -0.4745 | No |
| 30 | BRS3 | bombesin receptor subtype 3 [Source:HGNC Symbol;Acc:HGNC:1113] | 20641 | 0.000 | -0.5171 | No |
| 31 | PDYN | prodynorphin [Source:HGNC Symbol;Acc:HGNC:8820] | 21290 | 0.000 | -0.5345 | No |
| 32 | ISL1 | ISL LIM homeobox 1 [Source:HGNC Symbol;Acc:HGNC:6132] | 22100 | 0.000 | -0.5564 | No |
| 33 | LHX8 | LIM homeobox 8 [Source:HGNC Symbol;Acc:HGNC:28838] | 23248 | 0.000 | -0.5873 | No |
| 34 | CRABP1 | cellular retinoic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2338] | 24046 | 0.000 | -0.6089 | No |
| 35 | MME-AS1 | MME antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40376] | 24389 | 0.000 | -0.6181 | No |
| 36 | FNDC9 | fibronectin type III domain containing 9 [Source:HGNC Symbol;Acc:HGNC:33547] | 25860 | 0.000 | -0.6578 | No |
| 37 | SLC6A5 | solute carrier family 6 member 5 [Source:HGNC Symbol;Acc:HGNC:11051] | 26041 | 0.000 | -0.6626 | No |
| 38 | ARX | aristaless related homeobox [Source:HGNC Symbol;Acc:HGNC:18060] | 27367 | 0.000 | -0.6984 | No |
| 39 | AVP | arginine vasopressin [Source:HGNC Symbol;Acc:HGNC:894] | 27423 | 0.000 | -0.6999 | No |
| 40 | KCNA1 | potassium voltage-gated channel subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:6218] | 27633 | -0.025 | -0.7025 | No |
| 41 | DLX6 | distal-less homeobox 6 [Source:HGNC Symbol;Acc:HGNC:2919] | 28111 | -0.082 | -0.7052 | No |
| 42 | CENPS-CORT | CENPS-CORT readthrough [Source:HGNC Symbol;Acc:HGNC:38843] | 30659 | -0.401 | -0.7244 | Yes |
| 43 | SP8 | Sp8 transcription factor [Source:HGNC Symbol;Acc:HGNC:19196] | 31855 | -0.585 | -0.6842 | Yes |
| 44 | RXRG | retinoid X receptor gamma [Source:HGNC Symbol;Acc:HGNC:10479] | 34207 | -1.182 | -0.6015 | Yes |
| 45 | DLX1 | distal-less homeobox 1 [Source:HGNC Symbol;Acc:HGNC:2914] | 34338 | -1.228 | -0.4531 | Yes |
| 46 | RARB | retinoic acid receptor beta [Source:HGNC Symbol;Acc:HGNC:9865] | 37057 | -4.265 | 0.0009 | Yes |
