Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_GAQ_versus_WT_NA.greenbergcls.cls
#WT_GAQ_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_GAQ_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetFAN_EMBRYONIC_CTX_MICROGLIA_1
Enrichment Score (ES)-0.8091077
Normalized Enrichment Score (NES)-1.7779135
Nominal p-value0.0
FDR q-value0.0
FWER p-Value0.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: FAN_EMBRYONIC_CTX_MICROGLIA_1   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CDK2AP2cyclin dependent kinase 2 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:30833]3572.4620.0007No
2RHEBRas homolog, mTORC1 binding [Source:HGNC Symbol;Acc:HGNC:10011]10181.420-0.0113No
3EVI2Becotropic viral integration site 2B [Source:HGNC Symbol;Acc:HGNC:3500]15151.100-0.0201No
4DDX39ADExD-box helicase 39A [Source:HGNC Symbol;Acc:HGNC:17821]16021.067-0.0179No
5CKLFchemokine like factor [Source:HGNC Symbol;Acc:HGNC:13253]17431.009-0.0175No
6CKS2CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:2000]17571.003-0.0136No
7SRSF3serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]29360.604-0.0430No
8SRSF10serine and arginine rich splicing factor 10 [Source:HGNC Symbol;Acc:HGNC:16713]43320.334-0.0794No
9HERC5HECT and RLD domain containing E3 ubiquitin protein ligase 5 [Source:HGNC Symbol;Acc:HGNC:24368]50170.228-0.0969No
10PTTG1PTTG1 regulator of sister chromatid separation, securin [Source:HGNC Symbol;Acc:HGNC:9690]56370.136-0.1131No
11GGHgamma-glutamyl hydrolase [Source:HGNC Symbol;Acc:HGNC:4248]59780.090-0.1219No
12RPS27Lribosomal protein S27 like [Source:HGNC Symbol;Acc:HGNC:18476]59980.087-0.1221No
13CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]61350.073-0.1255No
14H4C3H4 clustered histone 3 [Source:HGNC Symbol;Acc:HGNC:4787]104620.000-0.2426No
15C21orf58chromosome 21 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:1300]110230.000-0.2577No
16AC091057.1OTU deubiquitinase 7A pseudogene [Source:NCBI gene (formerly Entrezgene);Acc:100288637]130380.000-0.3123No
17H1-3H1.3 linker histone, cluster member [Source:HGNC Symbol;Acc:HGNC:4717]227690.000-0.5757No
18ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]261680.000-0.6677No
19BUB3BUB3 mitotic checkpoint protein [Source:HGNC Symbol;Acc:HGNC:1151]28342-0.112-0.7261No
20ANP32Eacidic nuclear phosphoprotein 32 family member E [Source:HGNC Symbol;Acc:HGNC:16673]28628-0.144-0.7332No
21POLQDNA polymerase theta [Source:HGNC Symbol;Acc:HGNC:9186]29092-0.200-0.7449No
22HJURPHolliday junction recognition protein [Source:HGNC Symbol;Acc:HGNC:25444]29642-0.271-0.7586No
23TUBB4Btubulin beta 4B class IVb [Source:HGNC Symbol;Acc:HGNC:20771]29922-0.301-0.7649No
24CDC27cell division cycle 27 [Source:HGNC Symbol;Acc:HGNC:1728]29928-0.302-0.7637No
25ANAPC11anaphase promoting complex subunit 11 [Source:HGNC Symbol;Acc:HGNC:14452]30385-0.362-0.7746No
26CENPCcentromere protein C [Source:HGNC Symbol;Acc:HGNC:1854]30455-0.372-0.7749No
27NUCKS1nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]31006-0.454-0.7879No
28CEP152centrosomal protein 152 [Source:HGNC Symbol;Acc:HGNC:29298]31219-0.487-0.7916No
29FAM111Afamily with sequence similarity 111 member A [Source:HGNC Symbol;Acc:HGNC:24725]31466-0.523-0.7960No
30DTYMKdeoxythymidylate kinase [Source:HGNC Symbol;Acc:HGNC:3061]31608-0.550-0.7975No
31KPNA2karyopherin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6395]31715-0.565-0.7980No
32AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]31738-0.568-0.7963No
33TROAPtrophinin associated protein [Source:HGNC Symbol;Acc:HGNC:12327]32139-0.639-0.8044No
34PLK4polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]32153-0.642-0.8021No
35CCNB1cyclin B1 [Source:HGNC Symbol;Acc:HGNC:1579]32260-0.666-0.8021No
36CENPWcentromere protein W [Source:HGNC Symbol;Acc:HGNC:21488]32288-0.674-0.8000No
37KIF20Akinesin family member 20A [Source:HGNC Symbol;Acc:HGNC:9787]32450-0.711-0.8014No
38HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]32479-0.717-0.7992No
39PIMREGPICALM interacting mitotic regulator [Source:HGNC Symbol;Acc:HGNC:25483]32847-0.803-0.8057Yes
40ITGB3BPintegrin subunit beta 3 binding protein [Source:HGNC Symbol;Acc:HGNC:6157]32861-0.806-0.8027Yes
41RAD51AP1RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]32901-0.817-0.8003Yes
42SIVA1SIVA1 apoptosis inducing factor [Source:HGNC Symbol;Acc:HGNC:17712]32902-0.817-0.7969Yes
43KIF20Bkinesin family member 20B [Source:HGNC Symbol;Acc:HGNC:7212]33301-0.923-0.8038Yes
44TPX2TPX2 microtubule nucleation factor [Source:HGNC Symbol;Acc:HGNC:1249]33320-0.929-0.8004Yes
45DEPDC1DEP domain containing 1 [Source:HGNC Symbol;Acc:HGNC:22949]33362-0.938-0.7976Yes
46KNL1kinetochore scaffold 1 [Source:HGNC Symbol;Acc:HGNC:24054]33455-0.960-0.7960Yes
47CKS1BCDC28 protein kinase regulatory subunit 1B [Source:HGNC Symbol;Acc:HGNC:19083]33639-1.014-0.7967Yes
48CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]33672-1.025-0.7933Yes
49CENPEcentromere protein E [Source:HGNC Symbol;Acc:HGNC:1856]33831-1.063-0.7931Yes
50ARL6IP1ADP ribosylation factor like GTPase 6 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:697]33946-1.095-0.7916Yes
51ARHGAP11ARho GTPase activating protein 11A [Source:HGNC Symbol;Acc:HGNC:15783]33954-1.099-0.7872Yes
52ESPL1extra spindle pole bodies like 1, separase [Source:HGNC Symbol;Acc:HGNC:16856]33977-1.108-0.7832Yes
53CDC25Ccell division cycle 25C [Source:HGNC Symbol;Acc:HGNC:1727]33986-1.112-0.7787Yes
54DIAPH3diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]34006-1.116-0.7745Yes
55TACC3transforming acidic coiled-coil containing protein 3 [Source:HGNC Symbol;Acc:HGNC:11524]34058-1.132-0.7712Yes
56MRPL18mitochondrial ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:14477]34067-1.136-0.7666Yes
57PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]34110-1.145-0.7630Yes
58KIF23kinesin family member 23 [Source:HGNC Symbol;Acc:HGNC:6392]34171-1.168-0.7597Yes
59H2AZ1H2A.Z variant histone 1 [Source:HGNC Symbol;Acc:HGNC:4741]34211-1.183-0.7558Yes
60CNTRLcentriolin [Source:HGNC Symbol;Acc:HGNC:1858]34248-1.197-0.7517Yes
61CKAP2Lcytoskeleton associated protein 2 like [Source:HGNC Symbol;Acc:HGNC:26877]34271-1.206-0.7473Yes
62CENPMcentromere protein M [Source:HGNC Symbol;Acc:HGNC:18352]34275-1.208-0.7423Yes
63FAM83Dfamily with sequence similarity 83 member D [Source:HGNC Symbol;Acc:HGNC:16122]34349-1.234-0.7391Yes
64CKAP5cytoskeleton associated protein 5 [Source:HGNC Symbol;Acc:HGNC:28959]34364-1.240-0.7343Yes
65CITcitron rho-interacting serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1985]34537-1.308-0.7334Yes
66BARD1BRCA1 associated RING domain 1 [Source:HGNC Symbol;Acc:HGNC:952]34661-1.354-0.7311Yes
67GLAgalactosidase alpha [Source:HGNC Symbol;Acc:HGNC:4296]34678-1.362-0.7258Yes
68CCNFcyclin F [Source:HGNC Symbol;Acc:HGNC:1591]34764-1.403-0.7222Yes
69UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]34791-1.414-0.7170Yes
70SMC1Astructural maintenance of chromosomes 1A [Source:HGNC Symbol;Acc:HGNC:11111]34805-1.420-0.7114Yes
71SGO1shugoshin 1 [Source:HGNC Symbol;Acc:HGNC:25088]34823-1.429-0.7059Yes
72PRR11proline rich 11 [Source:HGNC Symbol;Acc:HGNC:25619]34834-1.438-0.7001Yes
73PLK1polo like kinase 1 [Source:HGNC Symbol;Acc:HGNC:9077]34837-1.440-0.6941Yes
74CDCA8cell division cycle associated 8 [Source:HGNC Symbol;Acc:HGNC:14629]34877-1.459-0.6891Yes
75CENPNcentromere protein N [Source:HGNC Symbol;Acc:HGNC:30873]34884-1.464-0.6831Yes
76ASF1Banti-silencing function 1B histone chaperone [Source:HGNC Symbol;Acc:HGNC:20996]34892-1.469-0.6771Yes
77PBKPDZ binding kinase [Source:HGNC Symbol;Acc:HGNC:18282]34907-1.473-0.6713Yes
78TUBA1Ctubulin alpha 1c [Source:HGNC Symbol;Acc:HGNC:20768]35017-1.527-0.6679Yes
79PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]35050-1.543-0.6623Yes
80MND1meiotic nuclear divisions 1 [Source:HGNC Symbol;Acc:HGNC:24839]35073-1.558-0.6563Yes
81SHCBP1SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]35085-1.562-0.6501Yes
82SPC25SPC25 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:24031]35095-1.566-0.6437Yes
83SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]35127-1.583-0.6379Yes
84HP1BP3heterochromatin protein 1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:24973]35230-1.641-0.6338Yes
85BRCA2BRCA2 DNA repair associated [Source:HGNC Symbol;Acc:HGNC:1101]35234-1.641-0.6270Yes
86KIF22kinesin family member 22 [Source:HGNC Symbol;Acc:HGNC:6391]35249-1.649-0.6205Yes
87SPAG5sperm associated antigen 5 [Source:HGNC Symbol;Acc:HGNC:13452]35259-1.656-0.6138Yes
88RAD21RAD21 cohesin complex component [Source:HGNC Symbol;Acc:HGNC:9811]35280-1.666-0.6073Yes
89NCAPGnon-SMC condensin I complex subunit G [Source:HGNC Symbol;Acc:HGNC:24304]35314-1.681-0.6012Yes
90BUB1BBUB1 mitotic checkpoint serine/threonine kinase B [Source:HGNC Symbol;Acc:HGNC:1149]35320-1.686-0.5942Yes
91MZT1mitotic spindle organizing protein 1 [Source:HGNC Symbol;Acc:HGNC:33830]35397-1.730-0.5890Yes
92MXD3MAX dimerization protein 3 [Source:HGNC Symbol;Acc:HGNC:14008]35399-1.733-0.5818Yes
93SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]35408-1.739-0.5747Yes
94KIF4Akinesin family member 4A [Source:HGNC Symbol;Acc:HGNC:13339]35419-1.743-0.5677Yes
95DEKDEK proto-oncogene [Source:HGNC Symbol;Acc:HGNC:2768]35478-1.780-0.5618Yes
96PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]35494-1.788-0.5547Yes
97DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]35520-1.803-0.5478Yes
98MAD2L1mitotic arrest deficient 2 like 1 [Source:HGNC Symbol;Acc:HGNC:6763]35525-1.805-0.5403Yes
99BIRC5baculoviral IAP repeat containing 5 [Source:HGNC Symbol;Acc:HGNC:593]35551-1.818-0.5334Yes
100KIF2Ckinesin family member 2C [Source:HGNC Symbol;Acc:HGNC:6393]35561-1.824-0.5260Yes
101NCAPG2non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]35564-1.825-0.5184Yes
102CDKN3cyclin dependent kinase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:1791]35605-1.855-0.5117Yes
103TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]35626-1.864-0.5044Yes
104HMMRhyaluronan mediated motility receptor [Source:HGNC Symbol;Acc:HGNC:5012]35633-1.871-0.4967Yes
105EZH2enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]35653-1.889-0.4893Yes
106KIF18Bkinesin family member 18B [Source:HGNC Symbol;Acc:HGNC:27102]35656-1.892-0.4814Yes
107CEP55centrosomal protein 55 [Source:HGNC Symbol;Acc:HGNC:1161]35664-1.896-0.4737Yes
108H2AXH2A.X variant histone [Source:HGNC Symbol;Acc:HGNC:4739]35698-1.925-0.4665Yes
109TMEM106Ctransmembrane protein 106C [Source:HGNC Symbol;Acc:HGNC:28775]35729-1.946-0.4591Yes
110ATAD5ATPase family AAA domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25752]35759-1.969-0.4517Yes
111CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]35787-1.989-0.4441Yes
112KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]35789-1.990-0.4357Yes
113SGO2shugoshin 2 [Source:HGNC Symbol;Acc:HGNC:30812]35841-2.029-0.4286Yes
114GTSE1G2 and S-phase expressed 1 [Source:HGNC Symbol;Acc:HGNC:13698]35900-2.083-0.4214Yes
115IQGAP3IQ motif containing GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:20669]35937-2.113-0.4136Yes
116ATAD2ATPase family AAA domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30123]35970-2.128-0.4055Yes
117TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]36013-2.163-0.3976Yes
118UBE2Tubiquitin conjugating enzyme E2 T [Source:HGNC Symbol;Acc:HGNC:25009]36026-2.171-0.3888Yes
119FBXO5F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]36028-2.174-0.3797Yes
120MELKmaternal embryonic leucine zipper kinase [Source:HGNC Symbol;Acc:HGNC:16870]36036-2.183-0.3707Yes
121H2AC17H2A clustered histone 17 [Source:HGNC Symbol;Acc:HGNC:4735]36063-2.203-0.3622Yes
122CKAP2cytoskeleton associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1990]36065-2.205-0.3530Yes
123ANLNanillin actin binding protein [Source:HGNC Symbol;Acc:HGNC:14082]36068-2.206-0.3438Yes
124CENPUcentromere protein U [Source:HGNC Symbol;Acc:HGNC:21348]36076-2.214-0.3347Yes
125KIF14kinesin family member 14 [Source:HGNC Symbol;Acc:HGNC:19181]36082-2.223-0.3255Yes
126BUB1BUB1 mitotic checkpoint serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1148]36101-2.242-0.3166Yes
127TMPOthymopoietin [Source:HGNC Symbol;Acc:HGNC:11875]36104-2.244-0.3072Yes
128NUF2NUF2 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:14621]36124-2.261-0.2982Yes
129TTF2transcription termination factor 2 [Source:HGNC Symbol;Acc:HGNC:12398]36127-2.262-0.2888Yes
130AURKBaurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]36153-2.285-0.2799Yes
131NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]36164-2.301-0.2705Yes
132CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36192-2.319-0.2615Yes
133CDCA3cell division cycle associated 3 [Source:HGNC Symbol;Acc:HGNC:14624]36214-2.336-0.2523Yes
134KIF15kinesin family member 15 [Source:HGNC Symbol;Acc:HGNC:17273]36261-2.395-0.2435Yes
135DEPDC1BDEP domain containing 1B [Source:HGNC Symbol;Acc:HGNC:24902]36275-2.406-0.2338Yes
136PHF19PHD finger protein 19 [Source:HGNC Symbol;Acc:HGNC:24566]36300-2.429-0.2242Yes
137NCAPD2non-SMC condensin I complex subunit D2 [Source:HGNC Symbol;Acc:HGNC:24305]36323-2.449-0.2145Yes
138NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36364-2.499-0.2051Yes
139NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]36393-2.540-0.1953Yes
140CDCA2cell division cycle associated 2 [Source:HGNC Symbol;Acc:HGNC:14623]36433-2.595-0.1854Yes
141CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]36453-2.630-0.1749Yes
142FANCD2FA complementation group D2 [Source:HGNC Symbol;Acc:HGNC:3585]36504-2.685-0.1650Yes
143MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]36625-2.872-0.1562Yes
144CDKN2Ccyclin dependent kinase inhibitor 2C [Source:HGNC Symbol;Acc:HGNC:1789]36644-2.890-0.1446Yes
145KNSTRNkinetochore localized astrin (SPAG5) binding protein [Source:HGNC Symbol;Acc:HGNC:30767]36672-2.949-0.1329Yes
146ASPMassembly factor for spindle microtubules [Source:HGNC Symbol;Acc:HGNC:19048]36673-2.950-0.1206Yes
147RRM2ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]36676-2.954-0.1082Yes
148FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]36680-2.959-0.0959Yes
149CLSPNclaspin [Source:HGNC Symbol;Acc:HGNC:19715]36783-3.156-0.0854Yes
150CCDC18coiled-coil domain containing 18 [Source:HGNC Symbol;Acc:HGNC:30370]36822-3.221-0.0729Yes
151ESCO2establishment of sister chromatid cohesion N-acetyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:27230]36856-3.309-0.0600Yes
152H2AZ2H2A.Z variant histone 2 [Source:HGNC Symbol;Acc:HGNC:20664]36936-3.599-0.0470Yes
153NRMnurim [Source:HGNC Symbol;Acc:HGNC:8003]37014-3.953-0.0325Yes
154TCF19transcription factor 19 [Source:HGNC Symbol;Acc:HGNC:11629]37022-3.987-0.0160Yes
155TK1thymidine kinase 1 [Source:HGNC Symbol;Acc:HGNC:11830]37054-4.2410.0010Yes
Table: GSEA details [plain text format]



Fig 2: FAN_EMBRYONIC_CTX_MICROGLIA_1   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: FAN_EMBRYONIC_CTX_MICROGLIA_1: Random ES distribution   
Gene set null distribution of ES for FAN_EMBRYONIC_CTX_MICROGLIA_1