Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_LPS_versus_WT_NA.greenbergcls.cls
#WT_LPS_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_LPS
GeneSetCHR17Q11
Enrichment Score (ES)0.4036873
Normalized Enrichment Score (NES)1.0729743
Nominal p-value0.18666667
FDR q-value0.7408805
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: CHR17Q11   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1NOS2nitric oxide synthase 2 [Source:HGNC Symbol;Acc:HGNC:7873]294.7780.0502Yes
2LGALS9galectin 9 [Source:HGNC Symbol;Acc:HGNC:6570]684.3480.0955Yes
3CPDcarboxypeptidase D [Source:HGNC Symbol;Acc:HGNC:2301]874.1770.1395Yes
4SLC6A4solute carrier family 6 member 4 [Source:HGNC Symbol;Acc:HGNC:11050]2003.4890.1737Yes
5ADAP2ArfGAP with dual PH domains 2 [Source:HGNC Symbol;Acc:HGNC:16487]2523.2260.2067Yes
6TMEM98transmembrane protein 98 [Source:HGNC Symbol;Acc:HGNC:24529]3152.9460.2364Yes
7MYO1Dmyosin ID [Source:HGNC Symbol;Acc:HGNC:7598]4622.4470.2586Yes
8FAM222Bfamily with sequence similarity 222 member B [Source:HGNC Symbol;Acc:HGNC:25563]7101.9650.2729Yes
9GOSR1golgi SNAP receptor complex member 1 [Source:HGNC Symbol;Acc:HGNC:4430]8971.6650.2856Yes
10TAOK1TAO kinase 1 [Source:HGNC Symbol;Acc:HGNC:29259]10141.5400.2989Yes
11PSMD11proteasome 26S subunit, non-ATPase 11 [Source:HGNC Symbol;Acc:HGNC:9556]11581.4290.3102Yes
12NUFIP2nuclear FMR1 interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:17634]12741.3320.3213Yes
13TNFAIP1TNF alpha induced protein 1 [Source:HGNC Symbol;Acc:HGNC:11894]13421.2850.3332Yes
14RNF135ring finger protein 135 [Source:HGNC Symbol;Acc:HGNC:21158]15031.1750.3414Yes
15EVI2Becotropic viral integration site 2B [Source:HGNC Symbol;Acc:HGNC:3500]16451.0890.3492Yes
16EVI2Aecotropic viral integration site 2A [Source:HGNC Symbol;Acc:HGNC:3499]16711.0720.3600Yes
17SUPT6HSPT6 homolog, histone chaperone and transcription elongation factor [Source:HGNC Symbol;Acc:HGNC:11470]18031.0100.3672Yes
18EFCAB5EF-hand calcium binding domain 5 [Source:HGNC Symbol;Acc:HGNC:24801]18300.9980.3771Yes
19WSB1WD repeat and SOCS box containing 1 [Source:HGNC Symbol;Acc:HGNC:19221]18810.9740.3861Yes
20CRLF3cytokine receptor like factor 3 [Source:HGNC Symbol;Acc:HGNC:17177]19350.9400.3947Yes
21NSRP1nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]19710.9290.4037Yes
22IFT20intraflagellar transport 20 [Source:HGNC Symbol;Acc:HGNC:30989]24140.7630.3999No
23ZNF207zinc finger protein 207 [Source:HGNC Symbol;Acc:HGNC:12998]25610.7120.4035No
24TMEM199transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]36190.4350.3795No
25NEK8NIMA related kinase 8 [Source:HGNC Symbol;Acc:HGNC:13387]38350.3940.3779No
26UTP6UTP6 small subunit processome component [Source:HGNC Symbol;Acc:HGNC:18279]38560.3900.3815No
27RAB11FIP4RAB11 family interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30267]39520.3690.3829No
28NLKnemo like kinase [Source:HGNC Symbol;Acc:HGNC:29858]42090.3220.3794No
29WDR45BP1WD repeat domain 45B pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:26605]46500.2450.3701No
30BLMHbleomycin hydrolase [Source:HGNC Symbol;Acc:HGNC:1059]47640.2250.3694No
31KSR1kinase suppressor of ras 1 [Source:HGNC Symbol;Acc:HGNC:6465]47770.2230.3715No
32SSH2slingshot protein phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:30580]52720.1530.3597No
33CDK5R1cyclin dependent kinase 5 regulatory subunit 1 [Source:HGNC Symbol;Acc:HGNC:1775]53150.1460.3602No
34TEFMtranscription elongation factor, mitochondrial [Source:HGNC Symbol;Acc:HGNC:26223]53210.1450.3616No
35SH3GL1P2SH3 domain containing GRB2 like 1, endophilin A2 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:10836]54760.1240.3587No
36TIAF1TGFB1-induced anti-apoptotic factor 1 [Source:HGNC Symbol;Acc:HGNC:11803]61130.0380.3419No
37UBL5P2ubiquitin like 5 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:44640]61950.0240.3400No
38SEZ6seizure related 6 homolog [Source:HGNC Symbol;Acc:HGNC:15955]73140.0000.3097No
39TBC1D3P5TBC1 domain family member 3 pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:43567]77650.0000.2975No
40CRYBA1crystallin beta A1 [Source:HGNC Symbol;Acc:HGNC:2394]86840.0000.2727No
41PDLIM1P3PDZ and LIM domain 1 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:48946]97450.0000.2440No
42KRT17P3keratin 17 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:33697]99840.0000.2376No
43RNY4P13RNY4 pseudogene 13 [Source:HGNC Symbol;Acc:HGNC:34063]102400.0000.2307No
44RPS29P22ribosomal protein S29 pseudogene 22 [Source:HGNC Symbol;Acc:HGNC:35799]105990.0000.2210No
45CPDP1carboxypeptidase D pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:53102]107120.0000.2180No
46RHBDL3rhomboid like 3 [Source:HGNC Symbol;Acc:HGNC:16502]113310.0000.2012No
47LGALS9DPgalectin 9D, pseudogene [Source:HGNC Symbol;Acc:HGNC:49896]120340.0000.1822No
48ABHD15-AS1ABHD15 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:49685]120820.0000.1810No
49RNU4-34PRNA, U4 small nuclear 34, pseudogene [Source:HGNC Symbol;Acc:HGNC:46970]121680.0000.1787No
50RNU6-298PRNA, U6 small nuclear 298, pseudogene [Source:HGNC Symbol;Acc:HGNC:47261]124330.0000.1715No
51AC024267.4novel transcript, antisense to PHF12126480.0000.1657No
52SMURF2P1SMAD specific E3 ubiquitin protein ligase 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:44402]127210.0000.1638No
53VTNvitronectin [Source:HGNC Symbol;Acc:HGNC:12724]132340.0000.1499No
54ALOX12P1arachidonate 12-lipoxygenase pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:431]139830.0000.1297No
55LRRC37BP1leucine rich repeat containing 37B pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:25390]155850.0000.0864No
56DPRXP4divergent-paired related homeobox pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:32170]158280.0000.0798No
57RPL31P58ribosomal protein L31 pseudogene 58 [Source:HGNC Symbol;Acc:HGNC:35862]160840.0000.0729No
58SNORA70small nucleolar RNA, H/ACA box 70 [Source:HGNC Symbol;Acc:HGNC:10231]161110.0000.0722No
59RN7SL316PRNA, 7SL, cytoplasmic 316, pseudogene [Source:HGNC Symbol;Acc:HGNC:46332]162510.0000.0684No
60PPY2Ppancreatic polypeptide 2, pseudogene [Source:HGNC Symbol;Acc:HGNC:9328]165980.0000.0591No
61RNA5SP437RNA, 5S ribosomal pseudogene 437 [Source:HGNC Symbol;Acc:HGNC:43337]172280.0000.0421No
62RN7SL138PRNA, 7SL, cytoplasmic 138, pseudogene [Source:HGNC Symbol;Acc:HGNC:46154]182620.0000.0141No
63RN7SL45PRNA, 7SL, cytoplasmic 45, pseudogene [Source:HGNC Symbol;Acc:HGNC:46061]188580.000-0.0020No
64MIR193AmicroRNA 193a [Source:HGNC Symbol;Acc:HGNC:31563]189570.000-0.0046No
65LINC01992long intergenic non-protein coding RNA 1992 [Source:HGNC Symbol;Acc:HGNC:52824]202160.000-0.0387No
66RN7SL79PRNA, 7SL, cytoplasmic 79, pseudogene [Source:HGNC Symbol;Acc:HGNC:46095]205440.000-0.0475No
67OOSP1P2oocyte secreted protein 1 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:49241]205480.000-0.0476No
68RNU6ATAC7PRNA, U6atac small nuclear 7, pseudogene [Source:HGNC Symbol;Acc:HGNC:46906]205770.000-0.0484No
69RNU6-711PRNA, U6 small nuclear 711, pseudogene [Source:HGNC Symbol;Acc:HGNC:47674]213600.000-0.0695No
70RNU6-990PRNA, U6 small nuclear 990, pseudogene [Source:HGNC Symbol;Acc:HGNC:47953]215570.000-0.0748No
71RNU6-1134PRNA, U6 small nuclear 1134, pseudogene [Source:HGNC Symbol;Acc:HGNC:48097]219600.000-0.0857No
72SNORD4Bsmall nucleolar RNA, C/D box 4B [Source:HGNC Symbol;Acc:HGNC:10098]221180.000-0.0900No
73SNORD4Asmall nucleolar RNA, C/D box 4A [Source:HGNC Symbol;Acc:HGNC:10097]221200.000-0.0900No
74SNORD63small nucleolar RNA, C/D box 63 [Source:HGNC Symbol;Acc:HGNC:10220]221450.000-0.0906No
75MIR632microRNA 632 [Source:HGNC Symbol;Acc:HGNC:32888]221910.000-0.0919No
76MIR365BmicroRNA 365b [Source:HGNC Symbol;Acc:HGNC:33693]223710.000-0.0967No
77RNU6-920PRNA, U6 small nuclear 920, pseudogene [Source:HGNC Symbol;Acc:HGNC:47883]224270.000-0.0982No
78PROCA1protein interacting with cyclin A1 [Source:HGNC Symbol;Acc:HGNC:28600]231660.000-0.1182No
79KRT18P55keratin 18 pseudogene 55 [Source:HGNC Symbol;Acc:HGNC:26874]232480.000-0.1204No
80FOXN1forkhead box N1 [Source:HGNC Symbol;Acc:HGNC:12765]232530.000-0.1205No
81SPACA3sperm acrosome associated 3 [Source:HGNC Symbol;Acc:HGNC:16260]238990.000-0.1379No
82PYY2peptide YY 2 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:9749]244320.000-0.1523No
83PIPOXpipecolic acid and sarcosine oxidase [Source:HGNC Symbol;Acc:HGNC:17804]246400.000-0.1579No
84MIR4523microRNA 4523 [Source:HGNC Symbol;Acc:HGNC:41583]251370.000-0.1713No
85ARGFXP2arginine-fifty homeobox pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:23977]252740.000-0.1750No
86AC116407.1novel transcript, antisense to RHOT1253370.000-0.1767No
87RNU6-1267PRNA, U6 small nuclear 1267, pseudogene [Source:HGNC Symbol;Acc:HGNC:48230]260650.000-0.1964No
88TBC1D29PTBC1 domain family member 29, pseudogene [Source:HGNC Symbol;Acc:HGNC:24509]261580.000-0.1989No
89LRRC37Bleucine rich repeat containing 37B [Source:HGNC Symbol;Acc:HGNC:29070]264520.000-0.2068No
90GTF2IP6general transcription factor IIi pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:51718]265660.000-0.2098No
91H3P41H3 histone pseudogene 41 [Source:HGNC Symbol;Acc:HGNC:42979]265980.000-0.2107No
92SNORD42Asmall nucleolar RNA, C/D box 42A [Source:HGNC Symbol;Acc:HGNC:10180]266360.000-0.2117No
93SNORD42Bsmall nucleolar RNA, C/D box 42B [Source:HGNC Symbol;Acc:HGNC:10181]266370.000-0.2117No
94SEBOXSEBOX homeobox [Source:HGNC Symbol;Acc:HGNC:32942]266380.000-0.2117No
95TMIGD1transmembrane and immunoglobulin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:32431]266990.000-0.2133No
96MIR4733microRNA 4733 [Source:HGNC Symbol;Acc:HGNC:41638]268300.000-0.2168No
97MIR4725microRNA 4725 [Source:HGNC Symbol;Acc:HGNC:41608]268530.000-0.2174No
98MIR4724microRNA 4724 [Source:HGNC Symbol;Acc:HGNC:41590]268600.000-0.2176No
99MIR4723microRNA 4723 [Source:HGNC Symbol;Acc:HGNC:41660]268610.000-0.2176No
100RNU6-1034PRNA, U6 small nuclear 1034, pseudogene [Source:HGNC Symbol;Acc:HGNC:47997]269270.000-0.2193No
101ERAL1Era like 12S mitochondrial rRNA chaperone 1 [Source:HGNC Symbol;Acc:HGNC:3424]27111-0.000-0.2243No
102SDF2stromal cell derived factor 2 [Source:HGNC Symbol;Acc:HGNC:10675]27679-0.078-0.2388No
103SLC46A1solute carrier family 46 member 1 [Source:HGNC Symbol;Acc:HGNC:30521]27890-0.107-0.2433No
104RPL23Aribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]28151-0.140-0.2489No
105SLC13A2solute carrier family 13 member 2 [Source:HGNC Symbol;Acc:HGNC:10917]28226-0.149-0.2493No
106RPS7P1ribosomal protein S7 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:17081]28754-0.221-0.2612No
107PHF12PHD finger protein 12 [Source:HGNC Symbol;Acc:HGNC:20816]29265-0.290-0.2719No
108LYRM9LYR motif containing 9 [Source:HGNC Symbol;Acc:HGNC:27314]30725-0.511-0.3060No
109PIGSphosphatidylinositol glycan anchor biosynthesis class S [Source:HGNC Symbol;Acc:HGNC:14937]31255-0.600-0.3139No
110SARM1sterile alpha and TIR motif containing 1 [Source:HGNC Symbol;Acc:HGNC:17074]31397-0.626-0.3110No
111SUZ12P1SUZ12 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:32421]31621-0.674-0.3099No
112NF1neurofibromin 1 [Source:HGNC Symbol;Acc:HGNC:7765]31797-0.714-0.3070No
113ANKRD13Bankyrin repeat domain 13B [Source:HGNC Symbol;Acc:HGNC:26363]31803-0.714-0.2995No
114MYO18Amyosin XVIIIA [Source:HGNC Symbol;Acc:HGNC:31104]32192-0.807-0.3014No
115RHOT1ras homolog family member T1 [Source:HGNC Symbol;Acc:HGNC:21168]32301-0.832-0.2954No
116C17orf75chromosome 17 open reading frame 75 [Source:HGNC Symbol;Acc:HGNC:30173]32443-0.867-0.2900No
117COPRScoordinator of PRMT5 and differentiation stimulator [Source:HGNC Symbol;Acc:HGNC:28848]32499-0.879-0.2821No
118SYPL1P2synaptophysin like 1 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:53547]32565-0.895-0.2743No
119SPAG5-AS1SPAG5 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:41140]32853-0.975-0.2717No
120TMEM97transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]33383-1.132-0.2740No
121SUZ12SUZ12 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:17101]33752-1.253-0.2706No
122TLCD1TLC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25177]33860-1.289-0.2597No
123TP53I13tumor protein p53 inducible protein 13 [Source:HGNC Symbol;Acc:HGNC:25102]33890-1.301-0.2466No
124ABHD15abhydrolase domain containing 15 [Source:HGNC Symbol;Acc:HGNC:26971]34077-1.366-0.2371No
125POLDIP2DNA polymerase delta interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:23781]34113-1.380-0.2233No
126DHRS13dehydrogenase/reductase 13 [Source:HGNC Symbol;Acc:HGNC:28326]34159-1.395-0.2097No
127GIT1GIT ArfGAP 1 [Source:HGNC Symbol;Acc:HGNC:4272]34185-1.404-0.1954No
128FLOT2flotillin 2 [Source:HGNC Symbol;Acc:HGNC:3758]34798-1.668-0.1942No
129KIAA0100KIAA0100 [Source:HGNC Symbol;Acc:HGNC:28960]35207-1.892-0.1850No
130ATAD5ATPase family AAA domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25752]35349-1.978-0.1678No
131CORO6coronin 6 [Source:HGNC Symbol;Acc:HGNC:21356]35371-1.994-0.1471No
132ALDOCaldolase, fructose-bisphosphate C [Source:HGNC Symbol;Acc:HGNC:418]35741-2.273-0.1328No
133SPAG5sperm associated antigen 5 [Source:HGNC Symbol;Acc:HGNC:13452]36141-2.658-0.1153No
134RAB34RAB34, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16519]36593-3.142-0.0940No
135TRAF4TNF receptor associated factor 4 [Source:HGNC Symbol;Acc:HGNC:12034]36668-3.273-0.0611No
136UNC119unc-119 lipid binding chaperone [Source:HGNC Symbol;Acc:HGNC:12565]36677-3.286-0.0263No
137OMGoligodendrocyte myelin glycoprotein [Source:HGNC Symbol;Acc:HGNC:8135]36789-3.5110.0081No
Table: GSEA details [plain text format]



Fig 2: CHR17Q11   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CHR17Q11: Random ES distribution   
Gene set null distribution of ES for CHR17Q11