Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_LPS_versus_WT_NA.greenbergcls.cls
#WT_LPS_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_LPS
GeneSetCHR3Q12
Enrichment Score (ES)0.5124916
Normalized Enrichment Score (NES)1.1695236
Nominal p-value0.16336633
FDR q-value0.59208196
FWER p-Value0.986
Table: GSEA Results Summary



Fig 1: Enrichment plot: CHR3Q12   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1NFKBIZNFKB inhibitor zeta [Source:HGNC Symbol;Acc:HGNC:29805]264.8020.1537Yes
2DCBLD2discoidin, CUB and LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24627]1513.7820.2719Yes
3FILIP1Lfilamin A interacting protein 1 like [Source:HGNC Symbol;Acc:HGNC:24589]5412.2590.3340Yes
4GMFBP1glia maturation factor beta pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:38654]6482.0710.3977Yes
5ACTR3P3ACTR3 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:38679]10701.4950.4344Yes
6TRMT10CtRNA methyltransferase 10C, mitochondrial RNase P subunit [Source:HGNC Symbol;Acc:HGNC:26022]14801.1850.4615Yes
7ZBTB11zinc finger and BTB domain containing 11 [Source:HGNC Symbol;Acc:HGNC:16740]17731.0210.4864Yes
8NXPE3neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]22190.8310.5011Yes
9ABI3BPABI family member 3 binding protein [Source:HGNC Symbol;Acc:HGNC:17265]26240.6930.5125Yes
10TFGtrafficking from ER to golgi regulator [Source:HGNC Symbol;Acc:HGNC:11758]38860.3820.4907No
11ZBTB11-AS1ZBTB11 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:48573]46730.2410.4773No
12IMPG2interphotoreceptor matrix proteoglycan 2 [Source:HGNC Symbol;Acc:HGNC:18362]47040.2360.4840No
13TBC1D23TBC1 domain family member 23 [Source:HGNC Symbol;Acc:HGNC:25622]54250.1300.4688No
14ADGRG7adhesion G protein-coupled receptor G7 [Source:HGNC Symbol;Acc:HGNC:19241]55010.1200.4706No
15ST3GAL6ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:18080]55340.1170.4736No
16PDCL3P4PDCL3 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:44505]60360.0500.4616No
17CMSS1cms1 ribosomal small subunit homolog [Source:HGNC Symbol;Acc:HGNC:28666]60530.0460.4627No
18LINC02085long intergenic non-protein coding RNA 2085 [Source:HGNC Symbol;Acc:HGNC:27190]63600.0000.4544No
19ZPLD1zona pellucida like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:27022]69410.0000.4387No
20ZNF90P1zinc finger protein 90 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:12888]72520.0000.4304No
21ST3GAL6-AS1ST3GAL6 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40828]89320.0000.3851No
22FAM172BPfamily with sequence similarity 172 member B, pseudogene [Source:HGNC Symbol;Acc:HGNC:34336]91220.0000.3800No
23RNU6-26PRNA, U6 small nuclear 26, pseudogene [Source:HGNC Symbol;Acc:HGNC:34252]95200.0000.3692No
24PDLIM1P4PDZ and LIM domain 1 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:48947]97480.0000.3631No
25DUSP12P1dual specificity phosphatase 12 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:49059]106360.0000.3392No
26TMEM30CPtransmembrane protein 30C, pseudogene [Source:HGNC Symbol;Acc:HGNC:30443]109860.0000.3298No
27LINC00973long intergenic non-protein coding RNA 973 [Source:HGNC Symbol;Acc:HGNC:48868]120190.0000.3019No
28TMEM45Atransmembrane protein 45A [Source:HGNC Symbol;Acc:HGNC:25480]146920.0000.2298No
29RNU6-865PRNA, U6 small nuclear 865, pseudogene [Source:HGNC Symbol;Acc:HGNC:47828]170130.0000.1671No
30COL8A1collagen type VIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2215]191660.0000.1091No
31ACTG1P13actin gamma 1 pseudogene 13 [Source:HGNC Symbol;Acc:HGNC:49058]197070.0000.0945No
32RNU6-461PRNA, U6 small nuclear 461, pseudogene [Source:HGNC Symbol;Acc:HGNC:47424]204840.0000.0735No
33MIR3921microRNA 3921 [Source:HGNC Symbol;Acc:HGNC:38936]206900.0000.0680No
34LNP1leukemia NUP98 fusion partner 1 [Source:HGNC Symbol;Acc:HGNC:28014]247750.000-0.0422No
35RNU6-1256PRNA, U6 small nuclear 1256, pseudogene [Source:HGNC Symbol;Acc:HGNC:48219]257570.000-0.0687No
36RNU6-1263PRNA, U6 small nuclear 1263, pseudogene [Source:HGNC Symbol;Acc:HGNC:48226]260360.000-0.0762No
37TOMM70translocase of outer mitochondrial membrane 70 [Source:HGNC Symbol;Acc:HGNC:11985]29575-0.335-0.1609No
38RPL24ribosomal protein L24 [Source:HGNC Symbol;Acc:HGNC:10325]30539-0.478-0.1716No
39VTI1BP1vesicle transport through interaction with t-SNAREs 1B pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:43727]31832-0.722-0.1832No
40PCNPPEST proteolytic signal containing nuclear protein [Source:HGNC Symbol;Acc:HGNC:30023]32705-0.934-0.1768No
41NIT2nitrilase family member 2 [Source:HGNC Symbol;Acc:HGNC:29878]34925-1.732-0.1810No
42CEP97centrosomal protein 97 [Source:HGNC Symbol;Acc:HGNC:26244]35029-1.783-0.1264No
43SENP7SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]36167-2.686-0.0708No
44WWP1P1WW domain containing E3 ubiquitin protein ligase 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:48944]36448-2.9760.0173No
Table: GSEA details [plain text format]



Fig 2: CHR3Q12   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CHR3Q12: Random ES distribution   
Gene set null distribution of ES for CHR3Q12