Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_LPS_versus_WT_NA.greenbergcls.cls
#WT_LPS_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_LPS
GeneSetCHR3Q28
Enrichment Score (ES)0.7198313
Normalized Enrichment Score (NES)1.5377637
Nominal p-value0.017391304
FDR q-value0.11237712
FWER p-Value0.219
Table: GSEA Results Summary



Fig 1: Enrichment plot: CHR3Q28   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IL1RAPinterleukin 1 receptor accessory protein [Source:HGNC Symbol;Acc:HGNC:5995]11131.4640.2347Yes
2P3H2prolyl 3-hydroxylase 2 [Source:HGNC Symbol;Acc:HGNC:19317]12581.3430.4738Yes
3CCT6P4chaperonin containing TCP1 subunit 6 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:35148]13321.2920.7054Yes
4MTAPP2methylthioadenosine phosphorylase pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:42443]36590.4270.7198Yes
5PYDC2pyrin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:33512]80210.0000.6022No
6MIR28microRNA 28 [Source:HGNC Symbol;Acc:HGNC:31615]95520.0000.5609No
7TMEM207transmembrane protein 207 [Source:HGNC Symbol;Acc:HGNC:33705]138830.0000.4440No
8TPRG1tumor protein p63 regulated 1 [Source:HGNC Symbol;Acc:HGNC:24759]139100.0000.4433No
9LPP-AS1LPP antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40346]140010.0000.4409No
10TP63tumor protein p63 [Source:HGNC Symbol;Acc:HGNC:15979]152570.0000.4070No
11GCNT1P3glucosaminyl (N-acetyl) transferase 1 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:37973]173780.0000.3498No
12RN7SKP222RN7SK pseudogene 222 [Source:HGNC Symbol;Acc:HGNC:45946]180280.0000.3323No
13RN7SKP296RN7SK pseudogene 296 [Source:HGNC Symbol;Acc:HGNC:46020]186620.0000.3153No
14OSTNosteocrin [Source:HGNC Symbol;Acc:HGNC:29961]189410.0000.3078No
15UTS2Burotensin 2B [Source:HGNC Symbol;Acc:HGNC:30894]205020.0000.2657No
16LINC02013long intergenic non-protein coding RNA 2013 [Source:HGNC Symbol;Acc:HGNC:52848]213400.0000.2431No
17RNU6-1109PRNA, U6 small nuclear 1109, pseudogene [Source:HGNC Symbol;Acc:HGNC:48072]214090.0000.2412No
18GMNCgeminin coiled-coil domain containing [Source:HGNC Symbol;Acc:HGNC:40049]219400.0000.2269No
19MIR944microRNA 944 [Source:HGNC Symbol;Acc:HGNC:33690]225790.0000.2097No
20FGF12-AS2FGF12 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:40235]231060.0000.1955No
21FGF12-AS1FGF12 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40234]231070.0000.1955No
22FGF12-AS3FGF12 antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40236]231080.0000.1955No
23CLDN16claudin 16 [Source:HGNC Symbol;Acc:HGNC:2037]244190.0000.1602No
24P3H2-AS1P3H2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40886]245080.0000.1578No
25CLDN1claudin 1 [Source:HGNC Symbol;Acc:HGNC:2032]245580.0000.1565No
26TPRG1-AS2TPRG1 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:41062]264970.0000.1042No
27TPRG1-AS1TPRG1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:42391]264980.0000.1042No
28NMNAT1P3NMNAT1 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:49165]27466-0.0570.0884No
29CCDC50coiled-coil domain containing 50 [Source:HGNC Symbol;Acc:HGNC:18111]29353-0.3050.0926No
30OSTN-AS1OSTN antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:41250]31480-0.6420.1514No
Table: GSEA details [plain text format]



Fig 2: CHR3Q28   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CHR3Q28: Random ES distribution   
Gene set null distribution of ES for CHR3Q28