Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_LPS_versus_WT_NA.greenbergcls.cls
#WT_LPS_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetCROONQUIST_NRAS_SIGNALING_DN
Enrichment Score (ES)-0.848956
Normalized Enrichment Score (NES)-1.7157505
Nominal p-value0.0
FDR q-value0.0
FWER p-Value0.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: CROONQUIST_NRAS_SIGNALING_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1SBNO2strawberry notch homolog 2 [Source:HGNC Symbol;Acc:HGNC:29158]12681.337-0.0260No
2HMGA1high mobility group AT-hook 1 [Source:HGNC Symbol;Acc:HGNC:5010]16261.102-0.0289No
3GNAI1G protein subunit alpha i1 [Source:HGNC Symbol;Acc:HGNC:4384]21520.858-0.0378No
4EIF5eukaryotic translation initiation factor 5 [Source:HGNC Symbol;Acc:HGNC:3299]22740.811-0.0361No
5SNRPA1small nuclear ribonucleoprotein polypeptide A' [Source:HGNC Symbol;Acc:HGNC:11152]30640.566-0.0539No
6MYRFmyelin regulatory factor [Source:HGNC Symbol;Acc:HGNC:1181]37810.406-0.0708No
7APOBEC3Bapolipoprotein B mRNA editing enzyme catalytic subunit 3B [Source:HGNC Symbol;Acc:HGNC:17352]124670.000-0.3054No
8ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]258040.000-0.6656No
9CENPAcentromere protein A [Source:HGNC Symbol;Acc:HGNC:1851]31272-0.602-0.8096No
10PTTG1PTTG1 regulator of sister chromatid separation, securin [Source:HGNC Symbol;Acc:HGNC:9690]31585-0.666-0.8139No
11PLOD2procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 [Source:HGNC Symbol;Acc:HGNC:9082]32437-0.865-0.8316No
12CSE1Lchromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]32730-0.941-0.8337No
13PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]33245-1.087-0.8409No
14RFC3replication factor C subunit 3 [Source:HGNC Symbol;Acc:HGNC:9971]33258-1.093-0.8345No
15HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]33793-1.266-0.8412Yes
16CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]33887-1.300-0.8357Yes
17POLD3DNA polymerase delta 3, accessory subunit [Source:HGNC Symbol;Acc:HGNC:20932]34278-1.445-0.8374Yes
18PLK4polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]34588-1.576-0.8360Yes
19PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]34938-1.741-0.8348Yes
20CDC25Ccell division cycle 25C [Source:HGNC Symbol;Acc:HGNC:1727]34956-1.749-0.8245Yes
21MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]35043-1.792-0.8158Yes
22BRD8bromodomain containing 8 [Source:HGNC Symbol;Acc:HGNC:19874]35047-1.793-0.8049Yes
23CHAF1Achromatin assembly factor 1 subunit A [Source:HGNC Symbol;Acc:HGNC:1910]35073-1.810-0.7944Yes
24CKS1BCDC28 protein kinase regulatory subunit 1B [Source:HGNC Symbol;Acc:HGNC:19083]35148-1.850-0.7851Yes
25MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]35386-2.005-0.7792Yes
26RAD51CRAD51 paralog C [Source:HGNC Symbol;Acc:HGNC:9820]35456-2.055-0.7684Yes
27BUB1BBUB1 mitotic checkpoint serine/threonine kinase B [Source:HGNC Symbol;Acc:HGNC:1149]35573-2.135-0.7584Yes
28NASPnuclear autoantigenic sperm protein [Source:HGNC Symbol;Acc:HGNC:7644]35579-2.138-0.7454Yes
29CDC6cell division cycle 6 [Source:HGNC Symbol;Acc:HGNC:1744]35675-2.217-0.7344Yes
30CCNB1cyclin B1 [Source:HGNC Symbol;Acc:HGNC:1579]35735-2.266-0.7221Yes
31AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]35816-2.333-0.7099Yes
32TPX2TPX2 microtubule nucleation factor [Source:HGNC Symbol;Acc:HGNC:1249]35837-2.347-0.6960Yes
33SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]35874-2.384-0.6823Yes
34CHEK1checkpoint kinase 1 [Source:HGNC Symbol;Acc:HGNC:1925]35897-2.409-0.6682Yes
35OIP5Opa interacting protein 5 [Source:HGNC Symbol;Acc:HGNC:20300]35899-2.411-0.6534Yes
36SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]35901-2.411-0.6386Yes
37STILSTIL centriolar assembly protein [Source:HGNC Symbol;Acc:HGNC:10879]35955-2.459-0.6249Yes
38MCM2minichromosome maintenance complex component 2 [Source:HGNC Symbol;Acc:HGNC:6944]36076-2.578-0.6123Yes
39CDKN3cyclin dependent kinase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:1791]36108-2.616-0.5971Yes
40GALEUDP-galactose-4-epimerase [Source:HGNC Symbol;Acc:HGNC:4116]36127-2.643-0.5814Yes
41POLD1DNA polymerase delta 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9175]36139-2.657-0.5653Yes
42SPAG5sperm associated antigen 5 [Source:HGNC Symbol;Acc:HGNC:13452]36141-2.658-0.5490Yes
43GINS1GINS complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:28980]36164-2.684-0.5332Yes
44H2AXH2A.X variant histone [Source:HGNC Symbol;Acc:HGNC:4739]36206-2.726-0.5175Yes
45TRIP13thyroid hormone receptor interactor 13 [Source:HGNC Symbol;Acc:HGNC:12307]36261-2.777-0.5019Yes
46UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]36279-2.795-0.4852Yes
47TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]36339-2.870-0.4692Yes
48NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]36371-2.891-0.4523Yes
49TRAIPTRAF interacting protein [Source:HGNC Symbol;Acc:HGNC:30764]36449-2.976-0.4361Yes
50PLK1polo like kinase 1 [Source:HGNC Symbol;Acc:HGNC:9077]36483-3.006-0.4185Yes
51STMN1stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]36491-3.015-0.4002Yes
52GPX4glutathione peroxidase 4 [Source:HGNC Symbol;Acc:HGNC:4556]36555-3.099-0.3828Yes
53MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]36592-3.140-0.3645Yes
54KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]36611-3.176-0.3455Yes
55CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]36630-3.207-0.3263Yes
56SPC25SPC25 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:24031]36665-3.258-0.3072Yes
57MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]36667-3.270-0.2872Yes
58KIF22kinesin family member 22 [Source:HGNC Symbol;Acc:HGNC:6391]36692-3.321-0.2674Yes
59PTP4A3protein tyrosine phosphatase 4A3 [Source:HGNC Symbol;Acc:HGNC:9636]36707-3.354-0.2472Yes
60CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]36709-3.356-0.2266Yes
61DUTdeoxyuridine triphosphatase [Source:HGNC Symbol;Acc:HGNC:3078]36770-3.470-0.2069Yes
62AURKBaurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]36833-3.603-0.1865Yes
63KIF2Ckinesin family member 2C [Source:HGNC Symbol;Acc:HGNC:6393]36868-3.675-0.1648Yes
64FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]36876-3.698-0.1423Yes
65MYBL2MYB proto-oncogene like 2 [Source:HGNC Symbol;Acc:HGNC:7548]36917-3.817-0.1199Yes
66NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36922-3.842-0.0964Yes
67CHEK2checkpoint kinase 2 [Source:HGNC Symbol;Acc:HGNC:16627]36929-3.880-0.0728Yes
68CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36955-3.967-0.0491Yes
69WEE1WEE1 G2 checkpoint kinase [Source:HGNC Symbol;Acc:HGNC:12761]36989-4.089-0.0249Yes
70TK1thymidine kinase 1 [Source:HGNC Symbol;Acc:HGNC:11830]37060-4.4900.0008Yes
Table: GSEA details [plain text format]



Fig 2: CROONQUIST_NRAS_SIGNALING_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CROONQUIST_NRAS_SIGNALING_DN: Random ES distribution   
Gene set null distribution of ES for CROONQUIST_NRAS_SIGNALING_DN