Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_LPS_versus_WT_NA.greenbergcls.cls
#WT_LPS_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetKONG_E2F3_TARGETS
Enrichment Score (ES)-0.83973426
Normalized Enrichment Score (NES)-1.7315972
Nominal p-value0.0
FDR q-value0.0
FWER p-Value0.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: KONG_E2F3_TARGETS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1GAS5growth arrest specific 5 [Source:HGNC Symbol;Acc:HGNC:16355]12211.374-0.0259No
2NR1D1nuclear receptor subfamily 1 group D member 1 [Source:HGNC Symbol;Acc:HGNC:7962]14881.181-0.0270No
3E2F3E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]19240.946-0.0339No
4SRSF7serine and arginine rich splicing factor 7 [Source:HGNC Symbol;Acc:HGNC:10789]20590.892-0.0329No
5IGF2BP1insulin like growth factor 2 mRNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:28866]31160.555-0.0586No
6MED1mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]32460.520-0.0594No
7H2AC4H2A clustered histone 4 [Source:HGNC Symbol;Acc:HGNC:4734]37300.414-0.0703No
8DCKdeoxycytidine kinase [Source:HGNC Symbol;Acc:HGNC:2704]41560.331-0.0801No
9NUP50nucleoporin 50 [Source:HGNC Symbol;Acc:HGNC:8065]53840.137-0.1126No
10TAL2TAL bHLH transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11557]61430.032-0.1329No
11H4C15H4 clustered histone 15 [Source:HGNC Symbol;Acc:HGNC:29607]126410.000-0.3085No
12CDCA5cell division cycle associated 5 [Source:HGNC Symbol;Acc:HGNC:14626]166630.000-0.4172No
13MYBMYB proto-oncogene, transcription factor [Source:HGNC Symbol;Acc:HGNC:7545]190320.000-0.4812No
14PRLprolactin [Source:HGNC Symbol;Acc:HGNC:9445]199570.000-0.5062No
15PSORS1C2psoriasis susceptibility 1 candidate 2 [Source:HGNC Symbol;Acc:HGNC:17199]206020.000-0.5236No
16F13A1coagulation factor XIII A chain [Source:HGNC Symbol;Acc:HGNC:3531]225750.000-0.5769No
17GP1BAglycoprotein Ib platelet subunit alpha [Source:HGNC Symbol;Acc:HGNC:4439]230340.000-0.5893No
18FBXO45F-box protein 45 [Source:HGNC Symbol;Acc:HGNC:29148]28880-0.239-0.7460No
19HJURPHolliday junction recognition protein [Source:HGNC Symbol;Acc:HGNC:25444]29215-0.283-0.7536No
20MAPK8mitogen-activated protein kinase 8 [Source:HGNC Symbol;Acc:HGNC:6881]29409-0.314-0.7572No
21CENPHcentromere protein H [Source:HGNC Symbol;Acc:HGNC:17268]30241-0.434-0.7774No
22RPL12ribosomal protein L12 [Source:HGNC Symbol;Acc:HGNC:10302]30653-0.499-0.7860No
23SYCE2synaptonemal complex central element protein 2 [Source:HGNC Symbol;Acc:HGNC:27411]30731-0.511-0.7854No
24RPRD1Bregulation of nuclear pre-mRNA domain containing 1B [Source:HGNC Symbol;Acc:HGNC:16209]30912-0.542-0.7875No
25TAF1DTATA-box binding protein associated factor, RNA polymerase I subunit D [Source:HGNC Symbol;Acc:HGNC:28759]32404-0.860-0.8233No
26RAD51AP1RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]32718-0.936-0.8270No
27TYMSthymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]32856-0.976-0.8256No
28CBX2chromobox 2 [Source:HGNC Symbol;Acc:HGNC:1552]32969-1.006-0.8235No
29HLXH2.0 like homeobox [Source:HGNC Symbol;Acc:HGNC:4978]33572-1.193-0.8336Yes
30HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]33793-1.266-0.8330Yes
31FAM111Afamily with sequence similarity 111 member A [Source:HGNC Symbol;Acc:HGNC:24725]33810-1.273-0.8269Yes
32FEN1flap structure-specific endonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3650]34079-1.367-0.8270Yes
33LMNB1lamin B1 [Source:HGNC Symbol;Acc:HGNC:6637]34252-1.433-0.8243Yes
34SKP2S-phase kinase associated protein 2 [Source:HGNC Symbol;Acc:HGNC:10901]34311-1.461-0.8183Yes
35CCNE1cyclin E1 [Source:HGNC Symbol;Acc:HGNC:1589]34333-1.473-0.8113Yes
36CDC7cell division cycle 7 [Source:HGNC Symbol;Acc:HGNC:1745]34380-1.492-0.8048Yes
37CENPQcentromere protein Q [Source:HGNC Symbol;Acc:HGNC:21347]34493-1.537-0.7999Yes
38RBL1RB transcriptional corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:9893]34541-1.558-0.7931Yes
39RBBP8RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]34577-1.572-0.7860Yes
40RPL3ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]34892-1.713-0.7856Yes
41PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]34938-1.741-0.7778Yes
42RAD51RAD51 recombinase [Source:HGNC Symbol;Acc:HGNC:9817]34963-1.752-0.7695Yes
43MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]35043-1.792-0.7623Yes
44USP1ubiquitin specific peptidase 1 [Source:HGNC Symbol;Acc:HGNC:12607]35179-1.867-0.7564Yes
45DEPDC1DEP domain containing 1 [Source:HGNC Symbol;Acc:HGNC:22949]35388-2.006-0.7516Yes
46TACC3transforming acidic coiled-coil containing protein 3 [Source:HGNC Symbol;Acc:HGNC:11524]35484-2.073-0.7435Yes
47BUB1BBUB1 mitotic checkpoint serine/threonine kinase B [Source:HGNC Symbol;Acc:HGNC:1149]35573-2.135-0.7349Yes
48NASPnuclear autoantigenic sperm protein [Source:HGNC Symbol;Acc:HGNC:7644]35579-2.138-0.7240Yes
49CDC6cell division cycle 6 [Source:HGNC Symbol;Acc:HGNC:1744]35675-2.217-0.7151Yes
50CCNB1cyclin B1 [Source:HGNC Symbol;Acc:HGNC:1579]35735-2.266-0.7050Yes
51ERCC6LERCC excision repair 6 like, spindle assembly checkpoint helicase [Source:HGNC Symbol;Acc:HGNC:20794]35759-2.287-0.6938Yes
52AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]35816-2.333-0.6833Yes
53TPX2TPX2 microtubule nucleation factor [Source:HGNC Symbol;Acc:HGNC:1249]35837-2.347-0.6717Yes
54SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]35901-2.411-0.6609Yes
55INCENPinner centromere protein [Source:HGNC Symbol;Acc:HGNC:6058]35923-2.431-0.6490Yes
56SPDL1spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]35981-2.483-0.6377Yes
57EZH2enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]36079-2.583-0.6270Yes
58NCAPG2non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]36148-2.663-0.6151Yes
59DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]36174-2.692-0.6019Yes
60UBE2Tubiquitin conjugating enzyme E2 T [Source:HGNC Symbol;Acc:HGNC:25009]36187-2.707-0.5882Yes
61H2AXH2A.X variant histone [Source:HGNC Symbol;Acc:HGNC:4739]36206-2.726-0.5746Yes
62KIF20Akinesin family member 20A [Source:HGNC Symbol;Acc:HGNC:9787]36227-2.746-0.5610Yes
63PRIM1DNA primase subunit 1 [Source:HGNC Symbol;Acc:HGNC:9369]36266-2.780-0.5477Yes
64UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]36279-2.795-0.5336Yes
65IQGAP3IQ motif containing GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:20669]36300-2.818-0.5196Yes
66CENPKcentromere protein K [Source:HGNC Symbol;Acc:HGNC:29479]36303-2.820-0.5051Yes
67TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]36339-2.870-0.4912Yes
68DNA2DNA replication helicase/nuclease 2 [Source:HGNC Symbol;Acc:HGNC:2939]36346-2.873-0.4765Yes
69RAD54LRAD54 like [Source:HGNC Symbol;Acc:HGNC:9826]36358-2.884-0.4619Yes
70NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]36371-2.891-0.4473Yes
71NCAPD2non-SMC condensin I complex subunit D2 [Source:HGNC Symbol;Acc:HGNC:24305]36376-2.899-0.4325Yes
72HMMRhyaluronan mediated motility receptor [Source:HGNC Symbol;Acc:HGNC:5012]36383-2.908-0.4176Yes
73NUF2NUF2 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:14621]36418-2.951-0.4033Yes
74SHCBP1SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]36430-2.964-0.3883Yes
75PLK1polo like kinase 1 [Source:HGNC Symbol;Acc:HGNC:9077]36483-3.006-0.3742Yes
76NCAPGnon-SMC condensin I complex subunit G [Source:HGNC Symbol;Acc:HGNC:24304]36516-3.057-0.3593Yes
77FIGNL1fidgetin like 1 [Source:HGNC Symbol;Acc:HGNC:13286]36523-3.064-0.3436Yes
78CDCA3cell division cycle associated 3 [Source:HGNC Symbol;Acc:HGNC:14624]36535-3.075-0.3281Yes
79PBKPDZ binding kinase [Source:HGNC Symbol;Acc:HGNC:18282]36576-3.129-0.3130Yes
80MELKmaternal embryonic leucine zipper kinase [Source:HGNC Symbol;Acc:HGNC:16870]36586-3.138-0.2970Yes
81ASF1Banti-silencing function 1B histone chaperone [Source:HGNC Symbol;Acc:HGNC:20996]36591-3.140-0.2809Yes
82MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]36592-3.140-0.2647Yes
83KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]36611-3.176-0.2488Yes
84PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]36622-3.191-0.2326Yes
85SPC25SPC25 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:24031]36665-3.258-0.2169Yes
86PSIP1PC4 and SFRS1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9527]36675-3.284-0.2002Yes
87CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]36709-3.356-0.1838Yes
88BUB1BUB1 mitotic checkpoint serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1148]36724-3.390-0.1667Yes
89RACGAP1Rac GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9804]36811-3.559-0.1506Yes
90CHAF1Bchromatin assembly factor 1 subunit B [Source:HGNC Symbol;Acc:HGNC:1911]36857-3.648-0.1330Yes
91CCNFcyclin F [Source:HGNC Symbol;Acc:HGNC:1591]36862-3.659-0.1142Yes
92KIF2Ckinesin family member 2C [Source:HGNC Symbol;Acc:HGNC:6393]36868-3.675-0.0954Yes
93NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]36870-3.679-0.0764Yes
94CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]36882-3.715-0.0576Yes
95BRCA1BRCA1 DNA repair associated [Source:HGNC Symbol;Acc:HGNC:1100]36897-3.766-0.0385Yes
96CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36955-3.967-0.0196Yes
97TK1thymidine kinase 1 [Source:HGNC Symbol;Acc:HGNC:11830]37060-4.4900.0008Yes
Table: GSEA details [plain text format]



Fig 2: KONG_E2F3_TARGETS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KONG_E2F3_TARGETS: Random ES distribution   
Gene set null distribution of ES for KONG_E2F3_TARGETS