Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.greenbergcls.cls #WT_LPS_versus_WT_NA.greenbergcls.cls #WT_LPS_versus_WT_NA_repos |
| Phenotype | greenbergcls.cls#WT_LPS_versus_WT_NA_repos |
| Upregulated in class | WT_LPS |
| GeneSet | LIANG_SILENCED_BY_METHYLATION_2 |
| Enrichment Score (ES) | 0.87232727 |
| Normalized Enrichment Score (NES) | 2.0981789 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.0 |
| FWER p-Value | 0.0 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | CCL5 | C-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10632] | 0 | 4.989 | 0.0626 | Yes |
| 2 | PTGS2 | prostaglandin-endoperoxide synthase 2 [Source:HGNC Symbol;Acc:HGNC:9605] | 7 | 4.952 | 0.1245 | Yes |
| 3 | IFIT1 | interferon induced protein with tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:5407] | 8 | 4.948 | 0.1866 | Yes |
| 4 | SERPINB2 | serpin family B member 2 [Source:HGNC Symbol;Acc:HGNC:8584] | 10 | 4.944 | 0.2486 | Yes |
| 5 | IFIT2 | interferon induced protein with tetratricopeptide repeats 2 [Source:HGNC Symbol;Acc:HGNC:5409] | 23 | 4.827 | 0.3088 | Yes |
| 6 | MX1 | MX dynamin like GTPase 1 [Source:HGNC Symbol;Acc:HGNC:7532] | 31 | 4.755 | 0.3682 | Yes |
| 7 | MX2 | MX dynamin like GTPase 2 [Source:HGNC Symbol;Acc:HGNC:7533] | 35 | 4.721 | 0.4274 | Yes |
| 8 | IRF7 | interferon regulatory factor 7 [Source:HGNC Symbol;Acc:HGNC:6122] | 56 | 4.507 | 0.4834 | Yes |
| 9 | IFI44 | interferon induced protein 44 [Source:HGNC Symbol;Acc:HGNC:16938] | 85 | 4.196 | 0.5352 | Yes |
| 10 | STAT1 | signal transducer and activator of transcription 1 [Source:HGNC Symbol;Acc:HGNC:11362] | 112 | 4.003 | 0.5847 | Yes |
| 11 | OAS1 | 2'-5'-oligoadenylate synthetase 1 [Source:HGNC Symbol;Acc:HGNC:8086] | 134 | 3.887 | 0.6329 | Yes |
| 12 | TNFAIP3 | TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896] | 158 | 3.722 | 0.6790 | Yes |
| 13 | OAS2 | 2'-5'-oligoadenylate synthetase 2 [Source:HGNC Symbol;Acc:HGNC:8087] | 160 | 3.711 | 0.7255 | Yes |
| 14 | SOD2 | superoxide dismutase 2 [Source:HGNC Symbol;Acc:HGNC:11180] | 221 | 3.363 | 0.7661 | Yes |
| 15 | SAA1 | serum amyloid A1 [Source:HGNC Symbol;Acc:HGNC:10513] | 259 | 3.209 | 0.8053 | Yes |
| 16 | IL13RA2 | interleukin 13 receptor subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:5975] | 532 | 2.289 | 0.8267 | Yes |
| 17 | IFIT3 | interferon induced protein with tetratricopeptide repeats 3 [Source:HGNC Symbol;Acc:HGNC:5411] | 606 | 2.135 | 0.8515 | Yes |
| 18 | IL6 | interleukin 6 [Source:HGNC Symbol;Acc:HGNC:6018] | 732 | 1.930 | 0.8723 | Yes |
| 19 | INHBA | inhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066] | 1676 | 1.067 | 0.8602 | No |
| 20 | C3 | complement C3 [Source:HGNC Symbol;Acc:HGNC:1318] | 2058 | 0.892 | 0.8612 | No |
| 21 | HBEGF | heparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059] | 2579 | 0.708 | 0.8560 | No |
| 22 | CXCL2 | C-X-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:4603] | 2862 | 0.618 | 0.8561 | No |
| 23 | UCHL1 | ubiquitin C-terminal hydrolase L1 [Source:HGNC Symbol;Acc:HGNC:12513] | 2959 | 0.588 | 0.8609 | No |
| 24 | STX3 | syntaxin 3 [Source:HGNC Symbol;Acc:HGNC:11438] | 3251 | 0.518 | 0.8596 | No |
| 25 | IFI44L | interferon induced protein 44 like [Source:HGNC Symbol;Acc:HGNC:17817] | 4623 | 0.248 | 0.8256 | No |
| 26 | DHRS2 | dehydrogenase/reductase 2 [Source:HGNC Symbol;Acc:HGNC:18349] | 4921 | 0.204 | 0.8202 | No |
| 27 | SP100 | SP100 nuclear antigen [Source:HGNC Symbol;Acc:HGNC:11206] | 5503 | 0.120 | 0.8060 | No |
| 28 | CCL20 | C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619] | 6434 | 0.000 | 0.7809 | No |
| 29 | AREG | amphiregulin [Source:HGNC Symbol;Acc:HGNC:651] | 7301 | 0.000 | 0.7575 | No |
| 30 | SLPI | secretory leukocyte peptidase inhibitor [Source:HGNC Symbol;Acc:HGNC:11092] | 9248 | 0.000 | 0.7050 | No |
| 31 | LCN2 | lipocalin 2 [Source:HGNC Symbol;Acc:HGNC:6526] | 10905 | 0.000 | 0.6602 | No |
| 32 | TNFSF10 | TNF superfamily member 10 [Source:HGNC Symbol;Acc:HGNC:11925] | 12430 | 0.000 | 0.6191 | No |
| 33 | BIK | BCL2 interacting killer [Source:HGNC Symbol;Acc:HGNC:1051] | 15547 | 0.000 | 0.5350 | No |
| 34 | H19 | H19 imprinted maternally expressed transcript [Source:HGNC Symbol;Acc:HGNC:4713] | 17051 | 0.000 | 0.4944 | No |
| 35 | ICAM1 | intercellular adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:5344] | 18143 | 0.000 | 0.4649 | No |
| 36 | GAGE1 | G antigen 1 [Source:HGNC Symbol;Acc:HGNC:4098] | 18668 | 0.000 | 0.4508 | No |
| 37 | MMP1 | matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155] | 18964 | 0.000 | 0.4428 | No |
| 38 | CXCL6 | C-X-C motif chemokine ligand 6 [Source:HGNC Symbol;Acc:HGNC:10643] | 19304 | 0.000 | 0.4336 | No |
| 39 | CXCL5 | C-X-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10642] | 19321 | 0.000 | 0.4332 | No |
| 40 | PI3 | peptidase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:8947] | 19855 | 0.000 | 0.4188 | No |
| 41 | IFI6 | interferon alpha inducible protein 6 [Source:HGNC Symbol;Acc:HGNC:4054] | 20543 | 0.000 | 0.4003 | No |
| 42 | H2AC18 | H2A clustered histone 18 [Source:HGNC Symbol;Acc:HGNC:4736] | 21488 | 0.000 | 0.3748 | No |
| 43 | KRT17 | keratin 17 [Source:HGNC Symbol;Acc:HGNC:6427] | 21758 | 0.000 | 0.3675 | No |
| 44 | CTAG1B | cancer/testis antigen 1B [Source:HGNC Symbol;Acc:HGNC:2491] | 22135 | 0.000 | 0.3574 | No |
| 45 | CSF2 | colony stimulating factor 2 [Source:HGNC Symbol;Acc:HGNC:2434] | 24228 | 0.000 | 0.3009 | No |
| 46 | MAGEA12 | MAGE family member A12 [Source:HGNC Symbol;Acc:HGNC:6799] | 26161 | 0.000 | 0.2487 | No |
| 47 | MAGEA2 | MAGE family member A2 [Source:HGNC Symbol;Acc:HGNC:6800] | 26314 | 0.000 | 0.2446 | No |
| 48 | MAGEA4 | MAGE family member A4 [Source:HGNC Symbol;Acc:HGNC:6802] | 26320 | 0.000 | 0.2445 | No |
| 49 | SSX2 | SSX family member 2 [Source:HGNC Symbol;Acc:HGNC:11336] | 26810 | 0.000 | 0.2312 | No |
| 50 | XAF1 | XIAP associated factor 1 [Source:HGNC Symbol;Acc:HGNC:30932] | 26886 | 0.000 | 0.2292 | No |
| 51 | THBD | thrombomodulin [Source:HGNC Symbol;Acc:HGNC:11784] | 27398 | -0.047 | 0.2160 | No |
| 52 | STC1 | stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373] | 28065 | -0.129 | 0.1997 | No |
| 53 | MAGEA3 | MAGE family member A3 [Source:HGNC Symbol;Acc:HGNC:6801] | 28621 | -0.202 | 0.1872 | No |
| 54 | C1S | complement C1s [Source:HGNC Symbol;Acc:HGNC:1247] | 29570 | -0.335 | 0.1658 | No |
| 55 | NT5E | 5'-nucleotidase ecto [Source:HGNC Symbol;Acc:HGNC:8021] | 29797 | -0.367 | 0.1643 | No |
| 56 | H2AC6 | H2A clustered histone 6 [Source:HGNC Symbol;Acc:HGNC:4733] | 30679 | -0.502 | 0.1468 | No |
| 57 | S100A4 | S100 calcium binding protein A4 [Source:HGNC Symbol;Acc:HGNC:10494] | 32236 | -0.816 | 0.1150 | No |
| 58 | H2BC6 | H2B clustered histone 6 [Source:HGNC Symbol;Acc:HGNC:4753] | 33825 | -1.276 | 0.0882 | No |
