Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_LPS_versus_WT_NA.greenbergcls.cls
#WT_LPS_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetODONNELL_TFRC_TARGETS_DN
Enrichment Score (ES)-0.79938966
Normalized Enrichment Score (NES)-1.6970578
Nominal p-value0.0
FDR q-value5.283505E-5
FWER p-Value0.001
Table: GSEA Results Summary



Fig 1: Enrichment plot: ODONNELL_TFRC_TARGETS_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1KBTBD8kelch repeat and BTB domain containing 8 [Source:HGNC Symbol;Acc:HGNC:30691]5542.233-0.0053No
2HSPH1heat shock protein family H (Hsp110) member 1 [Source:HGNC Symbol;Acc:HGNC:16969]5552.2320.0045No
3DCP2decapping mRNA 2 [Source:HGNC Symbol;Acc:HGNC:24452]5792.1750.0133No
4TFRCtransferrin receptor [Source:HGNC Symbol;Acc:HGNC:11763]7361.9200.0175No
5ASNSasparagine synthetase (glutamine-hydrolyzing) [Source:HGNC Symbol;Acc:HGNC:753]7621.8780.0250No
6FAPfibroblast activation protein alpha [Source:HGNC Symbol;Acc:HGNC:3590]8841.6830.0290No
7TOX4TOX high mobility group box family member 4 [Source:HGNC Symbol;Acc:HGNC:20161]9451.6170.0345No
8FUSFUS RNA binding protein [Source:HGNC Symbol;Acc:HGNC:4010]10451.5090.0383No
9MEX3Cmex-3 RNA binding family member C [Source:HGNC Symbol;Acc:HGNC:28040]12921.3190.0374No
10ZBTB6zinc finger and BTB domain containing 6 [Source:HGNC Symbol;Acc:HGNC:16764]23380.7890.0126No
11BPTFbromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]23400.7890.0160No
12LRRC58leucine rich repeat containing 58 [Source:HGNC Symbol;Acc:HGNC:26968]30320.575-0.0002No
13SNORD17small nucleolar RNA, C/D box 17 [Source:HGNC Symbol;Acc:HGNC:32713]32910.508-0.0050No
14RANBP1RAN binding protein 1 [Source:HGNC Symbol;Acc:HGNC:9847]33350.497-0.0040No
15H3C7H3 clustered histone 7 [Source:HGNC Symbol;Acc:HGNC:4773]37340.414-0.0129No
16TNRC6Atrinucleotide repeat containing adaptor 6A [Source:HGNC Symbol;Acc:HGNC:11969]47150.234-0.0384No
17NUP50nucleoporin 50 [Source:HGNC Symbol;Acc:HGNC:8065]53840.137-0.0559No
18CCDC148coiled-coil domain containing 148 [Source:HGNC Symbol;Acc:HGNC:25191]54100.133-0.0560No
19PCBP1-AS1PCBP1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:42948]54680.124-0.0570No
20LIN28Blin-28 homolog B [Source:HGNC Symbol;Acc:HGNC:32207]65960.000-0.0875No
21USP29ubiquitin specific peptidase 29 [Source:HGNC Symbol;Acc:HGNC:18563]66340.000-0.0885No
22FGF22fibroblast growth factor 22 [Source:HGNC Symbol;Acc:HGNC:3679]69180.000-0.0962No
23SMYD3-IT1SMYD3 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41406]75730.000-0.1139No
24LINC01010long intergenic non-protein coding RNA 1010 [Source:HGNC Symbol;Acc:HGNC:48978]80550.000-0.1269No
25SIX3SIX homeobox 3 [Source:HGNC Symbol;Acc:HGNC:10889]84110.000-0.1365No
26TBC1D8-AS1TBC1D8 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:52782]87210.000-0.1449No
27CASP14caspase 14 [Source:HGNC Symbol;Acc:HGNC:1502]91320.000-0.1559No
28CYTORcytoskeleton regulator RNA [Source:HGNC Symbol;Acc:HGNC:28717]93090.000-0.1607No
29FBXL21PF-box and leucine rich repeat protein 21, pseudogene [Source:HGNC Symbol;Acc:HGNC:13600]99900.000-0.1791No
30RTP1receptor transporter protein 1 [Source:HGNC Symbol;Acc:HGNC:28580]105070.000-0.1931No
31FAM181Bfamily with sequence similarity 181 member B [Source:HGNC Symbol;Acc:HGNC:28512]107350.000-0.1992No
32PRKCQ-AS1PRKCQ antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44689]109250.000-0.2043No
33H4C12H4 clustered histone 12 [Source:HGNC Symbol;Acc:HGNC:4784]126430.000-0.2508No
34TP63tumor protein p63 [Source:HGNC Symbol;Acc:HGNC:15979]152570.000-0.3215No
35B4GALNT3beta-1,4-N-acetyl-galactosaminyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:24137]152710.000-0.3219No
36TCEAL3transcription elongation factor A like 3 [Source:HGNC Symbol;Acc:HGNC:28247]159350.000-0.3398No
37FETUBfetuin B [Source:HGNC Symbol;Acc:HGNC:3658]169020.000-0.3660No
38SLC12A1solute carrier family 12 member 1 [Source:HGNC Symbol;Acc:HGNC:10910]174840.000-0.3817No
39ITPRID1ITPR interacting domain containing 1 [Source:HGNC Symbol;Acc:HGNC:27363]176180.000-0.3853No
40MIR3939microRNA 3939 [Source:HGNC Symbol;Acc:HGNC:38931]207560.000-0.4702No
41KRT35keratin 35 [Source:HGNC Symbol;Acc:HGNC:6453]217130.000-0.4960No
42FAM72Cfamily with sequence similarity 72 member C [Source:HGNC Symbol;Acc:HGNC:30602]221280.000-0.5072No
43SNORD93small nucleolar RNA, C/D box 93 [Source:HGNC Symbol;Acc:HGNC:32755]221550.000-0.5079No
44TSBP1testis expressed basic protein 1 [Source:HGNC Symbol;Acc:HGNC:13922]223830.000-0.5141No
45CPNE6copine 6 [Source:HGNC Symbol;Acc:HGNC:2319]239470.000-0.5564No
46XAGE3X antigen family member 3 [Source:HGNC Symbol;Acc:HGNC:14618]244990.000-0.5713No
47TTC9Btetratricopeptide repeat domain 9B [Source:HGNC Symbol;Acc:HGNC:26395]257160.000-0.6042No
48DSCAMDS cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:3039]270670.000-0.6407No
49DLEU2deleted in lymphocytic leukemia 2 [Source:HGNC Symbol;Acc:HGNC:13748]27244-0.023-0.6454No
50KCNA1potassium voltage-gated channel subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:6218]27253-0.025-0.6455No
51VSNL1visinin like 1 [Source:HGNC Symbol;Acc:HGNC:12722]27978-0.120-0.6646No
52RAD1RAD1 checkpoint DNA exonuclease [Source:HGNC Symbol;Acc:HGNC:9806]28377-0.169-0.6746No
53FKBP5FKBP prolyl isomerase 5 [Source:HGNC Symbol;Acc:HGNC:3721]28448-0.178-0.6757No
54GNAQG protein subunit alpha q [Source:HGNC Symbol;Acc:HGNC:4390]28580-0.197-0.6784No
55SETMARSET domain and mariner transposase fusion gene [Source:HGNC Symbol;Acc:HGNC:10762]29059-0.263-0.6902No
56MON2MON2 homolog, regulator of endosome-to-Golgi trafficking [Source:HGNC Symbol;Acc:HGNC:29177]29151-0.276-0.6915No
57ANKRD50ankyrin repeat domain 50 [Source:HGNC Symbol;Acc:HGNC:29223]29441-0.318-0.6979No
58NPNTnephronectin [Source:HGNC Symbol;Acc:HGNC:27405]29640-0.345-0.7018No
59CFL2cofilin 2 [Source:HGNC Symbol;Acc:HGNC:1875]29866-0.377-0.7062No
60NRTNneurturin [Source:HGNC Symbol;Acc:HGNC:8007]29914-0.384-0.7058No
61RAD54BRAD54 homolog B [Source:HGNC Symbol;Acc:HGNC:17228]31159-0.583-0.7369No
62CENPAcentromere protein A [Source:HGNC Symbol;Acc:HGNC:1851]31272-0.602-0.7373No
63G3BP1G3BP stress granule assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:30292]31529-0.653-0.7414No
64SAMM50SAMM50 sorting and assembly machinery component [Source:HGNC Symbol;Acc:HGNC:24276]31678-0.686-0.7424No
65CD151CD151 molecule (Raph blood group) [Source:HGNC Symbol;Acc:HGNC:1630]32451-0.868-0.7596No
66RIF1replication timing regulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:23207]33651-1.221-0.7867No
67CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]33887-1.300-0.7874No
68TAF5TATA-box binding protein associated factor 5 [Source:HGNC Symbol;Acc:HGNC:11539]34332-1.472-0.7930Yes
69TUBD1tubulin delta 1 [Source:HGNC Symbol;Acc:HGNC:16811]34444-1.518-0.7894Yes
70ACACAacetyl-CoA carboxylase alpha [Source:HGNC Symbol;Acc:HGNC:84]34549-1.561-0.7854Yes
71PLK4polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]34588-1.576-0.7795Yes
72MND1meiotic nuclear divisions 1 [Source:HGNC Symbol;Acc:HGNC:24839]34625-1.594-0.7736Yes
73DIAPH3diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]34685-1.623-0.7681Yes
74GALTgalactose-1-phosphate uridylyltransferase [Source:HGNC Symbol;Acc:HGNC:4135]34847-1.692-0.7651Yes
75CHAF1Achromatin assembly factor 1 subunit A [Source:HGNC Symbol;Acc:HGNC:1910]35073-1.810-0.7633Yes
76DBF4DBF4 zinc finger [Source:HGNC Symbol;Acc:HGNC:17364]35120-1.833-0.7565Yes
77NFIAnuclear factor I A [Source:HGNC Symbol;Acc:HGNC:7784]35141-1.847-0.7490Yes
78CKS1BCDC28 protein kinase regulatory subunit 1B [Source:HGNC Symbol;Acc:HGNC:19083]35148-1.850-0.7411Yes
79NSD2nuclear receptor binding SET domain protein 2 [Source:HGNC Symbol;Acc:HGNC:12766]35201-1.889-0.7343Yes
80ARHGAP11ARho GTPase activating protein 11A [Source:HGNC Symbol;Acc:HGNC:15783]35215-1.897-0.7264Yes
81BRCA2BRCA2 DNA repair associated [Source:HGNC Symbol;Acc:HGNC:1101]35262-1.927-0.7192Yes
82DEPDC1DEP domain containing 1 [Source:HGNC Symbol;Acc:HGNC:22949]35388-2.006-0.7139Yes
83SURF1SURF1 cytochrome c oxidase assembly factor [Source:HGNC Symbol;Acc:HGNC:11474]35431-2.036-0.7061Yes
84TACC3transforming acidic coiled-coil containing protein 3 [Source:HGNC Symbol;Acc:HGNC:11524]35484-2.073-0.6985Yes
85TADA2Atranscriptional adaptor 2A [Source:HGNC Symbol;Acc:HGNC:11531]35536-2.107-0.6907Yes
86BUB1BBUB1 mitotic checkpoint serine/threonine kinase B [Source:HGNC Symbol;Acc:HGNC:1149]35573-2.135-0.6824Yes
87FANCD2FA complementation group D2 [Source:HGNC Symbol;Acc:HGNC:3585]35587-2.146-0.6734Yes
88CDC6cell division cycle 6 [Source:HGNC Symbol;Acc:HGNC:1744]35675-2.217-0.6661Yes
89CENPEcentromere protein E [Source:HGNC Symbol;Acc:HGNC:1856]35717-2.250-0.6574Yes
90CCNB1cyclin B1 [Source:HGNC Symbol;Acc:HGNC:1579]35735-2.266-0.6480Yes
91ZFAND4zinc finger AN1-type containing 4 [Source:HGNC Symbol;Acc:HGNC:23504]35752-2.282-0.6385Yes
92ERCC6LERCC excision repair 6 like, spindle assembly checkpoint helicase [Source:HGNC Symbol;Acc:HGNC:20794]35759-2.287-0.6287Yes
93AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]35816-2.333-0.6200Yes
94HELLShelicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]35876-2.386-0.6112Yes
95TMEM107transmembrane protein 107 [Source:HGNC Symbol;Acc:HGNC:28128]35881-2.395-0.6009Yes
96ACVR2Bactivin A receptor type 2B [Source:HGNC Symbol;Acc:HGNC:174]36066-2.562-0.5947Yes
97GTSE1G2 and S-phase expressed 1 [Source:HGNC Symbol;Acc:HGNC:13698]36081-2.586-0.5838Yes
98POLE2DNA polymerase epsilon 2, accessory subunit [Source:HGNC Symbol;Acc:HGNC:9178]36099-2.607-0.5729Yes
99CDKN3cyclin dependent kinase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:1791]36108-2.616-0.5617Yes
100DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]36174-2.692-0.5518Yes
101KIF20Akinesin family member 20A [Source:HGNC Symbol;Acc:HGNC:9787]36227-2.746-0.5412Yes
102GINS3GINS complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25851]36287-2.804-0.5306Yes
103BIRC5baculoviral IAP repeat containing 5 [Source:HGNC Symbol;Acc:HGNC:593]36304-2.820-0.5187Yes
104TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]36339-2.870-0.5072Yes
105ECT2epithelial cell transforming 2 [Source:HGNC Symbol;Acc:HGNC:3155]36341-2.871-0.4947Yes
106DNA2DNA replication helicase/nuclease 2 [Source:HGNC Symbol;Acc:HGNC:2939]36346-2.873-0.4823Yes
107NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]36371-2.891-0.4703Yes
108HMMRhyaluronan mediated motility receptor [Source:HGNC Symbol;Acc:HGNC:5012]36383-2.908-0.4579Yes
109CEP55centrosomal protein 55 [Source:HGNC Symbol;Acc:HGNC:1161]36388-2.914-0.4453Yes
110SHCBP1SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]36430-2.964-0.4335Yes
111SGO2shugoshin 2 [Source:HGNC Symbol;Acc:HGNC:30812]36478-3.003-0.4217Yes
112PLK1polo like kinase 1 [Source:HGNC Symbol;Acc:HGNC:9077]36483-3.006-0.4087Yes
113KIF14kinesin family member 14 [Source:HGNC Symbol;Acc:HGNC:19181]36494-3.018-0.3959Yes
114MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]36592-3.140-0.3848Yes
115FAM83Dfamily with sequence similarity 83 member D [Source:HGNC Symbol;Acc:HGNC:16122]36609-3.173-0.3714Yes
116KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]36611-3.176-0.3576Yes
117FBXO5F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]36613-3.178-0.3438Yes
118PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]36622-3.191-0.3301Yes
119FBXL20F-box and leucine rich repeat protein 20 [Source:HGNC Symbol;Acc:HGNC:24679]36625-3.198-0.3162Yes
120KIF4Akinesin family member 4A [Source:HGNC Symbol;Acc:HGNC:13339]36650-3.229-0.3028Yes
121SPC25SPC25 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:24031]36665-3.258-0.2890Yes
122CKAP2Lcytoskeleton associated protein 2 like [Source:HGNC Symbol;Acc:HGNC:26877]36687-3.310-0.2751Yes
123CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]36709-3.356-0.2611Yes
124BUB1BUB1 mitotic checkpoint serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1148]36724-3.390-0.2467Yes
125ANLNanillin actin binding protein [Source:HGNC Symbol;Acc:HGNC:14082]36818-3.574-0.2336Yes
126AURKBaurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]36833-3.603-0.2183Yes
127DEPDC1BDEP domain containing 1B [Source:HGNC Symbol;Acc:HGNC:24902]36851-3.637-0.2029Yes
128C4orf46chromosome 4 open reading frame 46 [Source:HGNC Symbol;Acc:HGNC:27320]36871-3.681-0.1874Yes
129FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]36876-3.698-0.1714Yes
130CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]36882-3.715-0.1553Yes
131RRM2ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]36891-3.747-0.1392Yes
132TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]36894-3.758-0.1229Yes
133MYBL2MYB proto-oncogene like 2 [Source:HGNC Symbol;Acc:HGNC:7548]36917-3.817-0.1069Yes
134NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36922-3.842-0.0902Yes
135CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36955-3.967-0.0738Yes
136MAP4K2mitogen-activated protein kinase kinase kinase kinase 2 [Source:HGNC Symbol;Acc:HGNC:6864]36991-4.095-0.0569Yes
137SCDstearoyl-CoA desaturase [Source:HGNC Symbol;Acc:HGNC:10571]37046-4.425-0.0391Yes
138ASPMassembly factor for spindle microtubules [Source:HGNC Symbol;Acc:HGNC:19048]37059-4.485-0.0199Yes
139APBB1amyloid beta precursor protein binding family B member 1 [Source:HGNC Symbol;Acc:HGNC:581]37079-4.7460.0003Yes
Table: GSEA details [plain text format]



Fig 2: ODONNELL_TFRC_TARGETS_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: ODONNELL_TFRC_TARGETS_DN: Random ES distribution   
Gene set null distribution of ES for ODONNELL_TFRC_TARGETS_DN