Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_LPS_versus_WT_NA.greenbergcls.cls
#WT_LPS_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetGNF2_SMC2L1
Enrichment Score (ES)-0.88869756
Normalized Enrichment Score (NES)-1.636246
Nominal p-value0.0
FDR q-value4.7564256E-4
FWER p-Value0.011
Table: GSEA Results Summary



Fig 1: Enrichment plot: GNF2_SMC2L1   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CKS2CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:2000]19020.962-0.0404No
2ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]258040.000-0.6854No
3MT1JPmetallothionein 1J, pseudogene [Source:HGNC Symbol;Acc:HGNC:7402]31017-0.559-0.8197No
4PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]33245-1.087-0.8674No
5RFC3replication factor C subunit 3 [Source:HGNC Symbol;Acc:HGNC:9971]33258-1.093-0.8553No
6CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]33887-1.300-0.8575No
7MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]35043-1.792-0.8684Yes
8CKS1BCDC28 protein kinase regulatory subunit 1B [Source:HGNC Symbol;Acc:HGNC:19083]35148-1.850-0.8502Yes
9CENPEcentromere protein E [Source:HGNC Symbol;Acc:HGNC:1856]35717-2.250-0.8400Yes
10RFC4replication factor C subunit 4 [Source:HGNC Symbol;Acc:HGNC:9972]35861-2.370-0.8169Yes
11SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]35874-2.384-0.7902Yes
12SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]35901-2.411-0.7635Yes
13MCM6minichromosome maintenance complex component 6 [Source:HGNC Symbol;Acc:HGNC:6949]36000-2.501-0.7378Yes
14PRIM1DNA primase subunit 1 [Source:HGNC Symbol;Acc:HGNC:9369]36266-2.780-0.7134Yes
15BIRC5baculoviral IAP repeat containing 5 [Source:HGNC Symbol;Acc:HGNC:593]36304-2.820-0.6823Yes
16TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]36339-2.870-0.6507Yes
17ESPL1extra spindle pole bodies like 1, separase [Source:HGNC Symbol;Acc:HGNC:16856]36344-2.872-0.6182Yes
18HMMRhyaluronan mediated motility receptor [Source:HGNC Symbol;Acc:HGNC:5012]36383-2.908-0.5862Yes
19RRM1ribonucleotide reductase catalytic subunit M1 [Source:HGNC Symbol;Acc:HGNC:10451]36425-2.957-0.5538Yes
20CDCA8cell division cycle associated 8 [Source:HGNC Symbol;Acc:HGNC:14629]36469-2.992-0.5210Yes
21KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]36611-3.176-0.4887Yes
22CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]36630-3.207-0.4528Yes
23KIF18Bkinesin family member 18B [Source:HGNC Symbol;Acc:HGNC:27102]36663-3.250-0.4168Yes
24CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]36709-3.356-0.3799Yes
25BUB1BUB1 mitotic checkpoint serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1148]36724-3.390-0.3418Yes
26NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]36870-3.679-0.3039Yes
27FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]36876-3.698-0.2621Yes
28CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]36882-3.715-0.2201Yes
29TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]36894-3.758-0.1777Yes
30MYBL2MYB proto-oncogene like 2 [Source:HGNC Symbol;Acc:HGNC:7548]36917-3.817-0.1350Yes
31NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36922-3.842-0.0915Yes
32CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36955-3.967-0.0473Yes
33ASPMassembly factor for spindle microtubules [Source:HGNC Symbol;Acc:HGNC:19048]37059-4.4850.0008Yes
Table: GSEA details [plain text format]



Fig 2: GNF2_SMC2L1   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GNF2_SMC2L1: Random ES distribution   
Gene set null distribution of ES for GNF2_SMC2L1