Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_LPS_versus_WT_NA.greenbergcls.cls
#WT_LPS_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_LPS
GeneSetMODULE_223
Enrichment Score (ES)0.5999786
Normalized Enrichment Score (NES)1.6254152
Nominal p-value0.0
FDR q-value0.094960965
FWER p-Value0.51
Table: GSEA Results Summary



Fig 1: Enrichment plot: MODULE_223   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]14.9750.0323Yes
2IL1Ainterleukin 1 alpha [Source:HGNC Symbol;Acc:HGNC:5991]24.9720.0646Yes
3IL1Binterleukin 1 beta [Source:HGNC Symbol;Acc:HGNC:5992]44.9620.0968Yes
4CSF3colony stimulating factor 3 [Source:HGNC Symbol;Acc:HGNC:2438]134.9200.1286Yes
5FOSL1FOS like 1, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:13718]304.7610.1591Yes
6CXCL10C-X-C motif chemokine ligand 10 [Source:HGNC Symbol;Acc:HGNC:10637]484.5920.1885Yes
7PDGFBplatelet derived growth factor subunit B [Source:HGNC Symbol;Acc:HGNC:8800]544.5180.2177Yes
8ISG20interferon stimulated exonuclease gene 20 [Source:HGNC Symbol;Acc:HGNC:6130]654.4130.2461Yes
9OSMoncostatin M [Source:HGNC Symbol;Acc:HGNC:8506]1383.8730.2693Yes
10CD83CD83 molecule [Source:HGNC Symbol;Acc:HGNC:1703]1663.6780.2925Yes
11MTHFRmethylenetetrahydrofolate reductase [Source:HGNC Symbol;Acc:HGNC:7436]2113.4070.3135Yes
12EDN1endothelin 1 [Source:HGNC Symbol;Acc:HGNC:3176]2423.2620.3338Yes
13MYCMYC proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7553]2513.2320.3546Yes
14TSPAN3tetraspanin 3 [Source:HGNC Symbol;Acc:HGNC:17752]3792.6750.3686Yes
15TLR1toll like receptor 1 [Source:HGNC Symbol;Acc:HGNC:11847]3842.6570.3857Yes
16BCAT1branched chain amino acid transaminase 1 [Source:HGNC Symbol;Acc:HGNC:976]4122.5660.4017Yes
17ZEB1zinc finger E-box binding homeobox 1 [Source:HGNC Symbol;Acc:HGNC:11642]4312.5200.4176Yes
18IL2RGinterleukin 2 receptor subunit gamma [Source:HGNC Symbol;Acc:HGNC:6010]5102.3180.4305Yes
19CSF1colony stimulating factor 1 [Source:HGNC Symbol;Acc:HGNC:2432]5252.3030.4451Yes
20MXD1MAX dimerization protein 1 [Source:HGNC Symbol;Acc:HGNC:6761]5382.2700.4595Yes
21NAB2NGFI-A binding protein 2 [Source:HGNC Symbol;Acc:HGNC:7627]5912.1570.4721Yes
22HLA-Fmajor histocompatibility complex, class I, F [Source:HGNC Symbol;Acc:HGNC:4963]6432.0750.4842Yes
23BTG1BTG anti-proliferation factor 1 [Source:HGNC Symbol;Acc:HGNC:1130]7131.9600.4951Yes
24TIMP1TIMP metallopeptidase inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:11820]7221.9440.5075Yes
25IL6interleukin 6 [Source:HGNC Symbol;Acc:HGNC:6018]7321.9300.5198Yes
26HLA-Cmajor histocompatibility complex, class I, C [Source:HGNC Symbol;Acc:HGNC:4933]8501.7240.5279Yes
27PRDX1peroxiredoxin 1 [Source:HGNC Symbol;Acc:HGNC:9352]8701.6990.5384Yes
28BCL6BCL6 transcription repressor [Source:HGNC Symbol;Acc:HGNC:1001]8991.6650.5484Yes
29HLA-Amajor histocompatibility complex, class I, A [Source:HGNC Symbol;Acc:HGNC:4931]10071.5430.5556Yes
30HLA-Bmajor histocompatibility complex, class I, B [Source:HGNC Symbol;Acc:HGNC:4932]12301.3680.5585Yes
31FTH1ferritin heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:3976]12561.3450.5665Yes
32IL15interleukin 15 [Source:HGNC Symbol;Acc:HGNC:5977]12671.3380.5749Yes
33NAMPTnicotinamide phosphoribosyltransferase [Source:HGNC Symbol;Acc:HGNC:30092]13651.2680.5806Yes
34KCNN4potassium calcium-activated channel subfamily N member 4 [Source:HGNC Symbol;Acc:HGNC:6293]14231.2280.5870Yes
35CD86CD86 molecule [Source:HGNC Symbol;Acc:HGNC:1705]16071.1130.5893Yes
36EVI2Aecotropic viral integration site 2A [Source:HGNC Symbol;Acc:HGNC:3499]16711.0720.5945Yes
37HLA-Gmajor histocompatibility complex, class I, G [Source:HGNC Symbol;Acc:HGNC:4964]17811.0170.5982Yes
38PDGFAplatelet derived growth factor subunit A [Source:HGNC Symbol;Acc:HGNC:8799]19420.9390.6000Yes
39KLF6Kruppel like factor 6 [Source:HGNC Symbol;Acc:HGNC:2235]23830.7700.5931No
40HBEGFheparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059]25790.7080.5924No
41DAB2DAB adaptor protein 2 [Source:HGNC Symbol;Acc:HGNC:2662]26900.6710.5938No
42B2Mbeta-2-microglobulin [Source:HGNC Symbol;Acc:HGNC:914]30470.5720.5879No
43MDKmidkine [Source:HGNC Symbol;Acc:HGNC:6972]35800.4450.5764No
44EMP3epithelial membrane protein 3 [Source:HGNC Symbol;Acc:HGNC:3335]39140.3760.5698No
45HPhaptoglobin [Source:HGNC Symbol;Acc:HGNC:5141]44220.2840.5579No
46DNAJC3DnaJ heat shock protein family (Hsp40) member C3 [Source:HGNC Symbol;Acc:HGNC:9439]46340.2470.5538No
47HFEhomeostatic iron regulator [Source:HGNC Symbol;Acc:HGNC:4886]48120.2180.5504No
48PSPHP1phosphoserine phosphatase pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:9578]49300.2030.5486No
49CDK5R1cyclin dependent kinase 5 regulatory subunit 1 [Source:HGNC Symbol;Acc:HGNC:1775]53150.1460.5391No
50EREGepiregulin [Source:HGNC Symbol;Acc:HGNC:3443]53620.1390.5388No
51CD5CD5 molecule [Source:HGNC Symbol;Acc:HGNC:1685]54930.1210.5361No
52NCF4neutrophil cytosolic factor 4 [Source:HGNC Symbol;Acc:HGNC:7662]55560.1140.5351No
53AKR1C3aldo-keto reductase family 1 member C3 [Source:HGNC Symbol;Acc:HGNC:386]58430.0760.5279No
54CCL14C-C motif chemokine ligand 14 [Source:HGNC Symbol;Acc:HGNC:10612]63990.0000.5129No
55SELPselectin P [Source:HGNC Symbol;Acc:HGNC:10721]71720.0000.4920No
56SELLselectin L [Source:HGNC Symbol;Acc:HGNC:10720]71730.0000.4920No
57RNASE6ribonuclease A family member k6 [Source:HGNC Symbol;Acc:HGNC:10048]72430.0000.4901No
58AREGamphiregulin [Source:HGNC Symbol;Acc:HGNC:651]73010.0000.4886No
59PDGFRAplatelet derived growth factor receptor alpha [Source:HGNC Symbol;Acc:HGNC:8803]75210.0000.4826No
60TNFSF9TNF superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11939]88120.0000.4477No
61LY6Elymphocyte antigen 6 family member E [Source:HGNC Symbol;Acc:HGNC:6727]91640.0000.4382No
62GRPRgastrin releasing peptide receptor [Source:HGNC Symbol;Acc:HGNC:4609]100080.0000.4154No
63PPBPpro-platelet basic protein [Source:HGNC Symbol;Acc:HGNC:9240]109450.0000.3901No
64S100BS100 calcium binding protein B [Source:HGNC Symbol;Acc:HGNC:10500]116110.0000.3721No
65ERBB2erb-b2 receptor tyrosine kinase 2 [Source:HGNC Symbol;Acc:HGNC:3430]119560.0000.3628No
66TGFAtransforming growth factor alpha [Source:HGNC Symbol;Acc:HGNC:11765]124410.0000.3497No
67IGF2insulin like growth factor 2 [Source:HGNC Symbol;Acc:HGNC:5466]124570.0000.3493No
68BST2bone marrow stromal cell antigen 2 [Source:HGNC Symbol;Acc:HGNC:1119]124580.0000.3493No
69LILRA1leukocyte immunoglobulin like receptor A1 [Source:HGNC Symbol;Acc:HGNC:6602]133860.0000.3242No
70LILRB3leukocyte immunoglobulin like receptor B3 [Source:HGNC Symbol;Acc:HGNC:6607]133940.0000.3240No
71LILRB4leukocyte immunoglobulin like receptor B4 [Source:HGNC Symbol;Acc:HGNC:6608]133950.0000.3240No
72LILRB5leukocyte immunoglobulin like receptor B5 [Source:HGNC Symbol;Acc:HGNC:6609]133960.0000.3240No
73IL18interleukin 18 [Source:HGNC Symbol;Acc:HGNC:5986]137340.0000.3149No
74IL15RAinterleukin 15 receptor subunit alpha [Source:HGNC Symbol;Acc:HGNC:5978]140950.0000.3051No
75TACSTD2tumor associated calcium signal transducer 2 [Source:HGNC Symbol;Acc:HGNC:11530]144090.0000.2966No
76CD2CD2 molecule [Source:HGNC Symbol;Acc:HGNC:1639]157290.0000.2610No
77CD4CD4 molecule [Source:HGNC Symbol;Acc:HGNC:1678]157300.0000.2610No
78HLA-DRAmajor histocompatibility complex, class II, DR alpha [Source:HGNC Symbol;Acc:HGNC:4947]161740.0000.2490No
79MST1Rmacrophage stimulating 1 receptor [Source:HGNC Symbol;Acc:HGNC:7381]162130.0000.2479No
80ADRA1Dadrenoceptor alpha 1D [Source:HGNC Symbol;Acc:HGNC:280]164590.0000.2413No
81TGFBItransforming growth factor beta induced [Source:HGNC Symbol;Acc:HGNC:11771]166220.0000.2369No
82FGAfibrinogen alpha chain [Source:HGNC Symbol;Acc:HGNC:3661]166290.0000.2368No
83FGGfibrinogen gamma chain [Source:HGNC Symbol;Acc:HGNC:3694]166300.0000.2368No
84GCGglucagon [Source:HGNC Symbol;Acc:HGNC:4191]168620.0000.2305No
85SPOCK1SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:HGNC Symbol;Acc:HGNC:11251]169860.0000.2272No
86IL3interleukin 3 [Source:HGNC Symbol;Acc:HGNC:6011]176250.0000.2099No
87HLA-DRB5major histocompatibility complex, class II, DR beta 5 [Source:HGNC Symbol;Acc:HGNC:4953]179450.0000.2013No
88OSMRoncostatin M receptor [Source:HGNC Symbol;Acc:HGNC:8507]188650.0000.1764No
89CXCL1C-X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:4602]193180.0000.1642No
90CXCL5C-X-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10642]193210.0000.1641No
91PTNpleiotrophin [Source:HGNC Symbol;Acc:HGNC:9630]199730.0000.1465No
92TFF3trefoil factor 3 [Source:HGNC Symbol;Acc:HGNC:11757]205360.0000.1313No
93EDNRAendothelin receptor type A [Source:HGNC Symbol;Acc:HGNC:3179]216650.0000.1008No
94SLAMF1signaling lymphocytic activation molecule family member 1 [Source:HGNC Symbol;Acc:HGNC:10903]227450.0000.0716No
95CD48CD48 molecule [Source:HGNC Symbol;Acc:HGNC:1683]227950.0000.0702No
96CD69CD69 molecule [Source:HGNC Symbol;Acc:HGNC:1694]228500.0000.0688No
97CD8BCD8b molecule [Source:HGNC Symbol;Acc:HGNC:1707]228610.0000.0685No
98CD8ACD8a molecule [Source:HGNC Symbol;Acc:HGNC:1706]228620.0000.0685No
99DEFA5defensin alpha 5 [Source:HGNC Symbol;Acc:HGNC:2764]232460.0000.0581No
100TPSAB1tryptase alpha/beta 1 [Source:HGNC Symbol;Acc:HGNC:12019]237890.0000.0435No
101LAMP3lysosomal associated membrane protein 3 [Source:HGNC Symbol;Acc:HGNC:14582]242380.0000.0313No
102FGF4fibroblast growth factor 4 [Source:HGNC Symbol;Acc:HGNC:3682]250530.0000.0093No
103CD79ACD79a molecule [Source:HGNC Symbol;Acc:HGNC:1698]251930.0000.0055No
104REG1Bregenerating family member 1 beta [Source:HGNC Symbol;Acc:HGNC:9952]260270.000-0.0170No
105ENPEPglutamyl aminopeptidase [Source:HGNC Symbol;Acc:HGNC:3355]267240.000-0.0358No
106GRNgranulin precursor [Source:HGNC Symbol;Acc:HGNC:4601]27340-0.041-0.0522No
107CHRM3cholinergic receptor muscarinic 3 [Source:HGNC Symbol;Acc:HGNC:1952]27834-0.101-0.0649No
108HLA-DMBmajor histocompatibility complex, class II, DM beta [Source:HGNC Symbol;Acc:HGNC:4935]27921-0.112-0.0665No
109VIPR1vasoactive intestinal peptide receptor 1 [Source:HGNC Symbol;Acc:HGNC:12694]28083-0.131-0.0700No
110LILRA2leukocyte immunoglobulin like receptor A2 [Source:HGNC Symbol;Acc:HGNC:6603]28250-0.151-0.0735No
111RPS27ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]28680-0.211-0.0838No
112RPS4Xribosomal protein S4 X-linked [Source:HGNC Symbol;Acc:HGNC:10424]28857-0.236-0.0870No
113FGBfibrinogen beta chain [Source:HGNC Symbol;Acc:HGNC:3662]28924-0.243-0.0872No
114LRPAP1LDL receptor related protein associated protein 1 [Source:HGNC Symbol;Acc:HGNC:6701]29312-0.296-0.0957No
115CCN1cellular communication network factor 1 [Source:HGNC Symbol;Acc:HGNC:2654]29505-0.325-0.0988No
116IL6Rinterleukin 6 receptor [Source:HGNC Symbol;Acc:HGNC:6019]30010-0.398-0.1099No
117SHC1SHC adaptor protein 1 [Source:HGNC Symbol;Acc:HGNC:10840]30945-0.547-0.1316No
118EGFepidermal growth factor [Source:HGNC Symbol;Acc:HGNC:3229]31269-0.602-0.1364No
119LY86lymphocyte antigen 86 [Source:HGNC Symbol;Acc:HGNC:16837]31402-0.627-0.1359No
120EMP2epithelial membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:3334]31416-0.631-0.1322No
121IGF1insulin like growth factor 1 [Source:HGNC Symbol;Acc:HGNC:5464]32080-0.781-0.1450No
122SFNstratifin [Source:HGNC Symbol;Acc:HGNC:10773]32221-0.813-0.1436No
123CAPN1calpain 1 [Source:HGNC Symbol;Acc:HGNC:1476]32551-0.891-0.1467No
124IRAK1interleukin 1 receptor associated kinase 1 [Source:HGNC Symbol;Acc:HGNC:6112]32726-0.940-0.1453No
125CRIP1cysteine rich protein 1 [Source:HGNC Symbol;Acc:HGNC:2360]32955-1.002-0.1449No
126BCAR1BCAR1 scaffold protein, Cas family member [Source:HGNC Symbol;Acc:HGNC:971]33573-1.193-0.1539No
127RUNX3RUNX family transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:10473]34150-1.392-0.1604No
128CSRP2cysteine and glycine rich protein 2 [Source:HGNC Symbol;Acc:HGNC:2470]34328-1.470-0.1557No
129INSIG1insulin induced gene 1 [Source:HGNC Symbol;Acc:HGNC:6083]34467-1.529-0.1495No
130GAS6growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]34778-1.661-0.1470No
131CSF3Rcolony stimulating factor 3 receptor [Source:HGNC Symbol;Acc:HGNC:2439]34781-1.661-0.1363No
132EMP1epithelial membrane protein 1 [Source:HGNC Symbol;Acc:HGNC:3333]35249-1.918-0.1365No
133CD81CD81 molecule [Source:HGNC Symbol;Acc:HGNC:1701]35328-1.964-0.1258No
134CREG1cellular repressor of E1A stimulated genes 1 [Source:HGNC Symbol;Acc:HGNC:2351]35657-2.205-0.1204No
135HLA-DOAmajor histocompatibility complex, class II, DO alpha [Source:HGNC Symbol;Acc:HGNC:4936]35803-2.316-0.1092No
136LRP1LDL receptor related protein 1 [Source:HGNC Symbol;Acc:HGNC:6692]35812-2.327-0.0943No
137EPS8epidermal growth factor receptor pathway substrate 8 [Source:HGNC Symbol;Acc:HGNC:3420]35993-2.497-0.0830No
138UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]36279-2.795-0.0725No
139NRP1neuropilin 1 [Source:HGNC Symbol;Acc:HGNC:8004]36578-3.130-0.0603No
140ZFP36L2ZFP36 ring finger protein like 2 [Source:HGNC Symbol;Acc:HGNC:1108]36647-3.227-0.0411No
141SERPINF1serpin family F member 1 [Source:HGNC Symbol;Acc:HGNC:8824]36984-4.057-0.0239No
142P4HA2prolyl 4-hydroxylase subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:8547]36994-4.1090.0026No
Table: GSEA details [plain text format]



Fig 2: MODULE_223   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: MODULE_223: Random ES distribution   
Gene set null distribution of ES for MODULE_223