Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_LPS_versus_WT_NA.greenbergcls.cls
#WT_LPS_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_LPS
GeneSetCSR_EARLY_UP.V1_UP
Enrichment Score (ES)0.5054771
Normalized Enrichment Score (NES)1.3351192
Nominal p-value0.0
FDR q-value0.07374302
FWER p-Value0.276
Table: GSEA Results Summary



Fig 1: Enrichment plot: CSR_EARLY_UP.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PTGS2prostaglandin-endoperoxide synthase 2 [Source:HGNC Symbol;Acc:HGNC:9605]74.9520.0305Yes
2ID3inhibitor of DNA binding 3, HLH protein [Source:HGNC Symbol;Acc:HGNC:5362]734.2880.0552Yes
3PNPpurine nucleoside phosphorylase [Source:HGNC Symbol;Acc:HGNC:7892]1173.9770.0787Yes
4ETS1ETS proto-oncogene 1, transcription factor [Source:HGNC Symbol;Acc:HGNC:3488]2403.2720.0956Yes
5CRISPLD2cysteine rich secretory protein LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25248]2993.0080.1127Yes
6ITPRIPL2ITPRIP like 2 [Source:HGNC Symbol;Acc:HGNC:27257]3022.9940.1311Yes
7SMAD7SMAD family member 7 [Source:HGNC Symbol;Acc:HGNC:6773]3462.7960.1473Yes
8MAP2K3mitogen-activated protein kinase kinase 3 [Source:HGNC Symbol;Acc:HGNC:6843]3762.6820.1631Yes
9KPNA4karyopherin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6397]4252.5280.1774Yes
10PTPN12protein tyrosine phosphatase non-receptor type 12 [Source:HGNC Symbol;Acc:HGNC:9645]4352.5090.1927Yes
11RIPK2receptor interacting serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:10020]4422.4990.2080Yes
12C21orf91chromosome 21 open reading frame 91 [Source:HGNC Symbol;Acc:HGNC:16459]4662.4420.2225Yes
13TENT4Aterminal nucleotidyltransferase 4A [Source:HGNC Symbol;Acc:HGNC:16705]4832.3890.2369Yes
14YWHAGtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma [Source:HGNC Symbol;Acc:HGNC:12852]5362.2730.2495Yes
15TNFRSF12ATNF receptor superfamily member 12A [Source:HGNC Symbol;Acc:HGNC:18152]5862.1610.2616Yes
16DNAJA1DnaJ heat shock protein family (Hsp40) member A1 [Source:HGNC Symbol;Acc:HGNC:5229]6172.1160.2739Yes
17FRMD6FERM domain containing 6 [Source:HGNC Symbol;Acc:HGNC:19839]6222.1100.2868Yes
18USP12ubiquitin specific peptidase 12 [Source:HGNC Symbol;Acc:HGNC:20485]6912.0010.2973Yes
19PXNpaxillin [Source:HGNC Symbol;Acc:HGNC:9718]6922.0000.3097Yes
20RRP9ribosomal RNA processing 9, U3 small nucleolar RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16829]6971.9880.3219Yes
21IL11interleukin 11 [Source:HGNC Symbol;Acc:HGNC:5966]9581.5960.3247Yes
22TLNRD1talin rod domain containing 1 [Source:HGNC Symbol;Acc:HGNC:13519]9621.5930.3345Yes
23ACTR3actin related protein 3 [Source:HGNC Symbol;Acc:HGNC:170]9741.5830.3440Yes
24CD274CD274 molecule [Source:HGNC Symbol;Acc:HGNC:17635]9821.5790.3536Yes
25BCAR3BCAR3 adaptor protein, NSP family member [Source:HGNC Symbol;Acc:HGNC:973]10361.5150.3615Yes
26ADRM1adhesion regulating molecule 1 [Source:HGNC Symbol;Acc:HGNC:15759]11811.4060.3663Yes
27MOB1BMOB kinase activator 1B [Source:HGNC Symbol;Acc:HGNC:29801]12091.3810.3742Yes
28SLC30A1solute carrier family 30 member 1 [Source:HGNC Symbol;Acc:HGNC:11012]12171.3780.3825Yes
29NIP7nucleolar pre-rRNA processing protein NIP7 [Source:HGNC Symbol;Acc:HGNC:24328]12651.3380.3895Yes
30ELOAelongin A [Source:HGNC Symbol;Acc:HGNC:11620]12941.3150.3969Yes
31AMMECR1LAMMECR1 like [Source:HGNC Symbol;Acc:HGNC:28658]13411.2850.4036Yes
32NOP16NOP16 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:26934]13881.2520.4101Yes
33GTPBP4GTP binding protein 4 [Source:HGNC Symbol;Acc:HGNC:21535]13941.2480.4177Yes
34PCSK7proprotein convertase subtilisin/kexin type 7 [Source:HGNC Symbol;Acc:HGNC:8748]14781.1870.4228Yes
35TRMT10CtRNA methyltransferase 10C, mitochondrial RNase P subunit [Source:HGNC Symbol;Acc:HGNC:26022]14801.1850.4301Yes
36HMGA1high mobility group AT-hook 1 [Source:HGNC Symbol;Acc:HGNC:5010]16261.1020.4330Yes
37INHBAinhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066]16761.0670.4383Yes
38DOT1LDOT1 like histone lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:24948]16971.0570.4443Yes
39ST3GAL1ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10862]17351.0390.4497Yes
40NMD3NMD3 ribosome export adaptor [Source:HGNC Symbol;Acc:HGNC:24250]17801.0170.4548Yes
41MSANTD3Myb/SANT DNA binding domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23370]18310.9970.4596Yes
42PUM3pumilio RNA binding family member 3 [Source:HGNC Symbol;Acc:HGNC:29676]18410.9900.4655Yes
43BRPF1bromodomain and PHD finger containing 1 [Source:HGNC Symbol;Acc:HGNC:14255]19140.9530.4694Yes
44C8orf76chromosome 8 open reading frame 76 [Source:HGNC Symbol;Acc:HGNC:25924]20600.8920.4710Yes
45LRRC8Aleucine rich repeat containing 8 VRAC subunit A [Source:HGNC Symbol;Acc:HGNC:19027]21630.8510.4735Yes
46UBE2Nubiquitin conjugating enzyme E2 N [Source:HGNC Symbol;Acc:HGNC:12492]23220.7920.4742Yes
47TOP1DNA topoisomerase I [Source:HGNC Symbol;Acc:HGNC:11986]23470.7850.4784Yes
48FJX1four-jointed box kinase 1 [Source:HGNC Symbol;Acc:HGNC:17166]23800.7710.4823Yes
49USP36ubiquitin specific peptidase 36 [Source:HGNC Symbol;Acc:HGNC:20062]24050.7640.4864Yes
50PTPN1protein tyrosine phosphatase non-receptor type 1 [Source:HGNC Symbol;Acc:HGNC:9642]24120.7630.4909Yes
51HBEGFheparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059]25790.7080.4908Yes
52EMC6ER membrane protein complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:28430]25850.7050.4950Yes
53DSPdesmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]26480.6840.4976Yes
54ZNF800zinc finger protein 800 [Source:HGNC Symbol;Acc:HGNC:27267]27080.6660.5001Yes
55DHX33DEAH-box helicase 33 [Source:HGNC Symbol;Acc:HGNC:16718]28150.6320.5011Yes
56TDGthymine DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:11700]30010.5780.4997Yes
57CEMIP2cell migration inducing hyaluronidase 2 [Source:HGNC Symbol;Acc:HGNC:11869]31520.5460.4990Yes
58MAPRE1microtubule associated protein RP/EB family member 1 [Source:HGNC Symbol;Acc:HGNC:6890]31620.5430.5021Yes
59ELOCelongin C [Source:HGNC Symbol;Acc:HGNC:11617]33400.4950.5004Yes
60DDX21DExD-box helicase 21 [Source:HGNC Symbol;Acc:HGNC:2744]35080.4590.4987Yes
61TIMM23translocase of inner mitochondrial membrane 23 [Source:HGNC Symbol;Acc:HGNC:17312]36170.4360.4985Yes
62NIFKnucleolar protein interacting with the FHA domain of MKI67 [Source:HGNC Symbol;Acc:HGNC:17838]36640.4260.4999Yes
63PPIFpeptidylprolyl isomerase F [Source:HGNC Symbol;Acc:HGNC:9259]36960.4200.5017Yes
64DNTTIP2deoxynucleotidyltransferase terminal interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:24013]37700.4080.5022Yes
65TFGtrafficking from ER to golgi regulator [Source:HGNC Symbol;Acc:HGNC:11758]38860.3820.5015Yes
66ELLelongation factor for RNA polymerase II [Source:HGNC Symbol;Acc:HGNC:23114]38890.3820.5038Yes
67EIF4A1eukaryotic translation initiation factor 4A1 [Source:HGNC Symbol;Acc:HGNC:3282]39130.3760.5055Yes
68YOD1YOD1 deubiquitinase [Source:HGNC Symbol;Acc:HGNC:25035]40960.3420.5027No
69RNPS1RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]41530.3310.5032No
70CSRNP2cysteine and serine rich nuclear protein 2 [Source:HGNC Symbol;Acc:HGNC:16006]42150.3200.5035No
71F3coagulation factor III, tissue factor [Source:HGNC Symbol;Acc:HGNC:3541]44310.2820.4995No
72CCDC59coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]45370.2620.4982No
73VTA1vesicle trafficking 1 [Source:HGNC Symbol;Acc:HGNC:20954]45800.2560.4987No
74RGMBrepulsive guidance molecule BMP co-receptor b [Source:HGNC Symbol;Acc:HGNC:26896]47990.2200.4941No
75DKC1dyskerin pseudouridine synthase 1 [Source:HGNC Symbol;Acc:HGNC:2890]48560.2120.4939No
76CHUKcomponent of inhibitor of nuclear factor kappa B kinase complex [Source:HGNC Symbol;Acc:HGNC:1974]48660.2120.4950No
77EHD4EH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:3245]49710.1960.4934No
78PTP4A1protein tyrosine phosphatase 4A1 [Source:HGNC Symbol;Acc:HGNC:9634]50520.1850.4924No
79BDKRB1bradykinin receptor B1 [Source:HGNC Symbol;Acc:HGNC:1029]51490.1690.4908No
80HECTD2HECT domain E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:26736]54150.1320.4845No
81GATA2GATA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4171]54490.1270.4844No
82EIF4A3eukaryotic translation initiation factor 4A3 [Source:HGNC Symbol;Acc:HGNC:18683]56650.1020.4792No
83CBFBcore-binding factor subunit beta [Source:HGNC Symbol;Acc:HGNC:1539]59390.0630.4722No
84NUP54nucleoporin 54 [Source:HGNC Symbol;Acc:HGNC:17359]63130.0080.4621No
85ATG101autophagy related 101 [Source:HGNC Symbol;Acc:HGNC:25679]63500.0010.4612No
86DCBLD1discoidin, CUB and LCCL domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21479]120500.0000.3069No
87DDIT4LDNA damage inducible transcript 4 like [Source:HGNC Symbol;Acc:HGNC:30555]133670.0000.2712No
88TMEM200Atransmembrane protein 200A [Source:HGNC Symbol;Acc:HGNC:21075]162980.0000.1919No
89DLX2distal-less homeobox 2 [Source:HGNC Symbol;Acc:HGNC:2915]167150.0000.1807No
90GALgalanin and GMAP prepropeptide [Source:HGNC Symbol;Acc:HGNC:4114]168310.0000.1776No
91SPRY4sprouty RTK signaling antagonist 4 [Source:HGNC Symbol;Acc:HGNC:15533]206530.0000.0741No
92CD33CD33 molecule [Source:HGNC Symbol;Acc:HGNC:1659]227790.0000.0166No
93FOXD1forkhead box D1 [Source:HGNC Symbol;Acc:HGNC:3802]233730.0000.0005No
94PLAURplasminogen activator, urokinase receptor [Source:HGNC Symbol;Acc:HGNC:9053]253210.000-0.0522No
95PLCH1phospholipase C eta 1 [Source:HGNC Symbol;Acc:HGNC:29185]256800.000-0.0619No
96SLC28A1solute carrier family 28 member 1 [Source:HGNC Symbol;Acc:HGNC:11001]257240.000-0.0630No
97SOX9SRY-box transcription factor 9 [Source:HGNC Symbol;Acc:HGNC:11204]257810.000-0.0645No
98NCLnucleolin [Source:HGNC Symbol;Acc:HGNC:7667]27220-0.018-0.1034No
99DIS3DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]27274-0.029-0.1046No
100PHF20L1PHD finger protein 20 like 1 [Source:HGNC Symbol;Acc:HGNC:24280]27327-0.039-0.1058No
101ILF2interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]27365-0.044-0.1065No
102SEC24ASEC24 homolog A, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:10703]27546-0.065-0.1110No
103STC1stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373]28065-0.129-0.1242No
104TBX2T-box transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11597]28231-0.149-0.1278No
105SREK1IP1SREK1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:26716]28425-0.175-0.1319No
106HPCAL1hippocalcin like 1 [Source:HGNC Symbol;Acc:HGNC:5145]28467-0.181-0.1319No
107SPRY2sprouty RTK signaling antagonist 2 [Source:HGNC Symbol;Acc:HGNC:11270]28535-0.190-0.1325No
108GNL2G protein nucleolar 2 [Source:HGNC Symbol;Acc:HGNC:29925]28572-0.196-0.1323No
109RFKriboflavin kinase [Source:HGNC Symbol;Acc:HGNC:30324]28711-0.215-0.1347No
110B3GNT6UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:24141]28716-0.216-0.1335No
111FZD8frizzled class receptor 8 [Source:HGNC Symbol;Acc:HGNC:4046]29016-0.255-0.1400No
112SNAI1snail family transcriptional repressor 1 [Source:HGNC Symbol;Acc:HGNC:11128]29426-0.316-0.1491No
113ZNF697zinc finger protein 697 [Source:HGNC Symbol;Acc:HGNC:32034]29534-0.330-0.1500No
114PHLPP2PH domain and leucine rich repeat protein phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:29149]29556-0.333-0.1485No
115MYO9Bmyosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]29652-0.346-0.1489No
116TIMM22translocase of inner mitochondrial membrane 22 [Source:HGNC Symbol;Acc:HGNC:17317]29758-0.360-0.1495No
117NT5E5'-nucleotidase ecto [Source:HGNC Symbol;Acc:HGNC:8021]29797-0.367-0.1483No
118SMARCA4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]29961-0.391-0.1503No
119THAP12THAP domain containing 12 [Source:HGNC Symbol;Acc:HGNC:9440]30186-0.426-0.1537No
120SCHIP1schwannomin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:15678]30888-0.538-0.1693No
121UTP3UTP3 small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24477]30895-0.539-0.1662No
122SRP72signal recognition particle 72 [Source:HGNC Symbol;Acc:HGNC:11303]30937-0.547-0.1639No
123PHLDB1pleckstrin homology like domain family B member 1 [Source:HGNC Symbol;Acc:HGNC:23697]30943-0.547-0.1606No
124AMD1adenosylmethionine decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:457]31324-0.611-0.1671No
125ZPBPzona pellucida binding protein [Source:HGNC Symbol;Acc:HGNC:15662]31396-0.626-0.1652No
126POLE3DNA polymerase epsilon 3, accessory subunit [Source:HGNC Symbol;Acc:HGNC:13546]31606-0.672-0.1667No
127RESTRE1 silencing transcription factor [Source:HGNC Symbol;Acc:HGNC:9966]31954-0.752-0.1714No
128GABPB2GA binding protein transcription factor subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:28441]32177-0.804-0.1725No
129ZBTB2zinc finger and BTB domain containing 2 [Source:HGNC Symbol;Acc:HGNC:20868]32250-0.819-0.1693No
130NRIP1nuclear receptor interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8001]32386-0.856-0.1677No
131TXNDC12thioredoxin domain containing 12 [Source:HGNC Symbol;Acc:HGNC:24626]32474-0.874-0.1646No
132IRAK1interleukin 1 receptor associated kinase 1 [Source:HGNC Symbol;Acc:HGNC:6112]32726-0.940-0.1656No
133HLXH2.0 like homeobox [Source:HGNC Symbol;Acc:HGNC:4978]33572-1.193-0.1811No
134BCAR1BCAR1 scaffold protein, Cas family member [Source:HGNC Symbol;Acc:HGNC:971]33573-1.193-0.1737No
135VGLL4vestigial like family member 4 [Source:HGNC Symbol;Acc:HGNC:28966]33720-1.241-0.1700No
136POM121POM121 transmembrane nucleoporin [Source:HGNC Symbol;Acc:HGNC:19702]33921-1.313-0.1673No
137KLF13Kruppel like factor 13 [Source:HGNC Symbol;Acc:HGNC:13672]34131-1.386-0.1644No
138SLC16A1solute carrier family 16 member 1 [Source:HGNC Symbol;Acc:HGNC:10922]34136-1.387-0.1559No
139UAP1UDP-N-acetylglucosamine pyrophosphorylase 1 [Source:HGNC Symbol;Acc:HGNC:12457]34770-1.659-0.1628No
140UGDHUDP-glucose 6-dehydrogenase [Source:HGNC Symbol;Acc:HGNC:12525]35105-1.829-0.1605No
141ZNF324zinc finger protein 324 [Source:HGNC Symbol;Acc:HGNC:14096]35275-1.934-0.1531No
142CTPS1CTP synthase 1 [Source:HGNC Symbol;Acc:HGNC:2519]35341-1.973-0.1427No
143FAM107Bfamily with sequence similarity 107 member B [Source:HGNC Symbol;Acc:HGNC:23726]35629-2.180-0.1369No
144PANX1pannexin 1 [Source:HGNC Symbol;Acc:HGNC:8599]35740-2.272-0.1258No
145NET1neuroepithelial cell transforming 1 [Source:HGNC Symbol;Acc:HGNC:14592]36014-2.512-0.1177No
146MRPS35mitochondrial ribosomal protein S35 [Source:HGNC Symbol;Acc:HGNC:16635]36138-2.655-0.1046No
147ELK3ETS transcription factor ELK3 [Source:HGNC Symbol;Acc:HGNC:3325]36308-2.827-0.0917No
148SHBSH2 domain containing adaptor protein B [Source:HGNC Symbol;Acc:HGNC:10838]36762-3.457-0.0825No
149SMTNsmoothelin [Source:HGNC Symbol;Acc:HGNC:11126]36784-3.498-0.0615No
150ZBTB12zinc finger and BTB domain containing 12 [Source:HGNC Symbol;Acc:HGNC:19066]36848-3.629-0.0407No
151KLF10Kruppel like factor 10 [Source:HGNC Symbol;Acc:HGNC:11810]36913-3.810-0.0189No
152SLC37A4solute carrier family 37 member 4 [Source:HGNC Symbol;Acc:HGNC:4061]36918-3.8180.0047No
Table: GSEA details [plain text format]



Fig 2: CSR_EARLY_UP.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CSR_EARLY_UP.V1_UP: Random ES distribution   
Gene set null distribution of ES for CSR_EARLY_UP.V1_UP