Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_LPS_versus_WT_NA.greenbergcls.cls
#WT_LPS_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_LPS
GeneSetKRAS.BREAST_UP.V1_UP
Enrichment Score (ES)0.45848572
Normalized Enrichment Score (NES)1.2126001
Nominal p-value0.015151516
FDR q-value0.1712589
FWER p-Value0.583
Table: GSEA Results Summary



Fig 1: Enrichment plot: KRAS.BREAST_UP.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]14.9750.0647Yes
2IL1Binterleukin 1 beta [Source:HGNC Symbol;Acc:HGNC:5992]44.9620.1292Yes
3TRAF1TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]504.5530.1872Yes
4GLRXglutaredoxin [Source:HGNC Symbol;Acc:HGNC:4330]1423.8350.2346Yes
5TNFAIP3TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]1583.7220.2826Yes
6DHRS9dehydrogenase/reductase 9 [Source:HGNC Symbol;Acc:HGNC:16888]3642.7240.3125Yes
7MMP9matrix metallopeptidase 9 [Source:HGNC Symbol;Acc:HGNC:7176]4742.4070.3409Yes
8IL2RGinterleukin 2 receptor subunit gamma [Source:HGNC Symbol;Acc:HGNC:6010]5102.3180.3701Yes
9IL13RA2interleukin 13 receptor subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:5975]5322.2890.3993Yes
10PPP1R15Aprotein phosphatase 1 regulatory subunit 15A [Source:HGNC Symbol;Acc:HGNC:14375]6951.9930.4208Yes
11IL1RL1interleukin 1 receptor like 1 [Source:HGNC Symbol;Acc:HGNC:5998]8781.6880.4378Yes
12ACP3acid phosphatase 3 [Source:HGNC Symbol;Acc:HGNC:125]12601.3430.4450Yes
13BIRC3baculoviral IAP repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:591]16741.0680.4477Yes
14FCRL2Fc receptor like 2 [Source:HGNC Symbol;Acc:HGNC:14875]23760.7730.4388Yes
15PRDM1PR/SET domain 1 [Source:HGNC Symbol;Acc:HGNC:9346]26510.6830.4403Yes
16AKAP12A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]26540.6830.4491Yes
17CXCL2C-X-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:4603]28620.6180.4515Yes
18CTNNA2catenin alpha 2 [Source:HGNC Symbol;Acc:HGNC:2510]28990.6080.4585Yes
19DNAJA4DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]38080.4000.4391No
20CFAP43cilia and flagella associated protein 43 [Source:HGNC Symbol;Acc:HGNC:26684]43150.3000.4293No
21BAIAP3BAI1 associated protein 3 [Source:HGNC Symbol;Acc:HGNC:948]44290.2820.4299No
22TAPT1transmembrane anterior posterior transformation 1 [Source:HGNC Symbol;Acc:HGNC:26887]46070.2500.4284No
23MMP10matrix metallopeptidase 10 [Source:HGNC Symbol;Acc:HGNC:7156]48470.2140.4247No
24CEACAM1CEA cell adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:1814]51780.1650.4179No
25SYPsynaptophysin [Source:HGNC Symbol;Acc:HGNC:11506]57590.0870.4034No
26PDE3Bphosphodiesterase 3B [Source:HGNC Symbol;Acc:HGNC:8779]58910.0690.4007No
27MKRN3makorin ring finger protein 3 [Source:HGNC Symbol;Acc:HGNC:7114]61150.0370.3952No
28CCL16C-C motif chemokine ligand 16 [Source:HGNC Symbol;Acc:HGNC:10614]64240.0000.3868No
29CCL22C-C motif chemokine ligand 22 [Source:HGNC Symbol;Acc:HGNC:10621]64310.0000.3867No
30SCG5secretogranin V [Source:HGNC Symbol;Acc:HGNC:10816]65730.0000.3829No
31DEFB4Adefensin beta 4A [Source:HGNC Symbol;Acc:HGNC:2767]71950.0000.3661No
32ADAMDEC1ADAM like decysin 1 [Source:HGNC Symbol;Acc:HGNC:16299]72160.0000.3655No
33MAPK4mitogen-activated protein kinase 4 [Source:HGNC Symbol;Acc:HGNC:6878]84320.0000.3326No
34OPRPNopiorphin prepropeptide [Source:HGNC Symbol;Acc:HGNC:17279]84630.0000.3318No
35CYB5R2cytochrome b5 reductase 2 [Source:HGNC Symbol;Acc:HGNC:24376]84680.0000.3317No
36PRRX1paired related homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9142]85800.0000.3287No
37CALB1calbindin 1 [Source:HGNC Symbol;Acc:HGNC:1434]87330.0000.3246No
38SOX17SRY-box transcription factor 17 [Source:HGNC Symbol;Acc:HGNC:18122]87530.0000.3241No
39CLSTN2calsyntenin 2 [Source:HGNC Symbol;Acc:HGNC:17448]88400.0000.3218No
40CDK2AP2P3cyclin dependent kinase 2 associated protein 2 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:38494]96960.0000.2986No
41KCNA2potassium voltage-gated channel subfamily A member 2 [Source:HGNC Symbol;Acc:HGNC:6220]97140.0000.2982No
42NPAS1neuronal PAS domain protein 1 [Source:HGNC Symbol;Acc:HGNC:7894]97910.0000.2961No
43KCNK3potassium two pore domain channel subfamily K member 3 [Source:HGNC Symbol;Acc:HGNC:6278]98430.0000.2947No
44FAM30Afamily with sequence similarity 30 member A [Source:HGNC Symbol;Acc:HGNC:19955]98770.0000.2938No
45SPRR2Bsmall proline rich protein 2B [Source:HGNC Symbol;Acc:HGNC:11262]101800.0000.2857No
46IL1RAPL1interleukin 1 receptor accessory protein like 1 [Source:HGNC Symbol;Acc:HGNC:5996]103980.0000.2798No
47ERC2-IT1ERC2 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:1229]104280.0000.2790No
48KLK12kallikrein related peptidase 12 [Source:HGNC Symbol;Acc:HGNC:6360]104580.0000.2782No
49PPBPpro-platelet basic protein [Source:HGNC Symbol;Acc:HGNC:9240]109450.0000.2651No
50ACKR4atypical chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:1611]110630.0000.2619No
51GPR37L1G protein-coupled receptor 37 like 1 [Source:HGNC Symbol;Acc:HGNC:14923]111720.0000.2590No
52PRB4proline rich protein BstNI subfamily 4 [Source:HGNC Symbol;Acc:HGNC:9340]114130.0000.2525No
53USH2Ausherin [Source:HGNC Symbol;Acc:HGNC:12601]114460.0000.2516No
54TMPRSS4transmembrane serine protease 4 [Source:HGNC Symbol;Acc:HGNC:11878]115020.0000.2501No
55CLPScolipase [Source:HGNC Symbol;Acc:HGNC:2085]116400.0000.2464No
56IGFBP3insulin like growth factor binding protein 3 [Source:HGNC Symbol;Acc:HGNC:5472]117300.0000.2440No
57PSCAprostate stem cell antigen [Source:HGNC Symbol;Acc:HGNC:9500]117480.0000.2436No
58CMA1chymase 1 [Source:HGNC Symbol;Acc:HGNC:2097]117700.0000.2430No
59ESM1endothelial cell specific molecule 1 [Source:HGNC Symbol;Acc:HGNC:3466]118410.0000.2411No
60ETV2ETS variant transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:3491]122530.0000.2300No
61IGF2insulin like growth factor 2 [Source:HGNC Symbol;Acc:HGNC:5466]124570.0000.2245No
62TAAR5trace amine associated receptor 5 [Source:HGNC Symbol;Acc:HGNC:30236]125880.0000.2210No
63GULP1GULP PTB domain containing engulfment adaptor 1 [Source:HGNC Symbol;Acc:HGNC:18649]131120.0000.2068No
64OR2C1olfactory receptor family 2 subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:8242]134230.0000.1984No
65IL37interleukin 37 [Source:HGNC Symbol;Acc:HGNC:15563]137770.0000.1889No
66NDUFA4L2NDUFA4 mitochondrial complex associated like 2 [Source:HGNC Symbol;Acc:HGNC:29836]139330.0000.1847No
67EFNA5ephrin A5 [Source:HGNC Symbol;Acc:HGNC:3225]142480.0000.1762No
68HSD11B1hydroxysteroid 11-beta dehydrogenase 1 [Source:HGNC Symbol;Acc:HGNC:5208]143260.0000.1741No
69ZP4zona pellucida glycoprotein 4 [Source:HGNC Symbol;Acc:HGNC:15770]146930.0000.1642No
70IL17RBinterleukin 17 receptor B [Source:HGNC Symbol;Acc:HGNC:18015]149820.0000.1564No
71SPINK1serine peptidase inhibitor Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]153330.0000.1469No
72GJA8gap junction protein alpha 8 [Source:HGNC Symbol;Acc:HGNC:4281]153960.0000.1452No
73IL1R2interleukin 1 receptor type 2 [Source:HGNC Symbol;Acc:HGNC:5994]158690.0000.1325No
74AMELYamelogenin Y-linked [Source:HGNC Symbol;Acc:HGNC:462]159650.0000.1299No
75MGLLmonoglyceride lipase [Source:HGNC Symbol;Acc:HGNC:17038]170720.0000.1000No
76CEACAM3CEA cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:1815]177810.0000.0808No
77SPON2spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]188200.0000.0527No
78COL9A1collagen type IX alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2217]188480.0000.0520No
79BMP6bone morphogenetic protein 6 [Source:HGNC Symbol;Acc:HGNC:1073]189350.0000.0497No
80NRLneural retina leucine zipper [Source:HGNC Symbol;Acc:HGNC:8002]192440.0000.0413No
81CXCL3C-X-C motif chemokine ligand 3 [Source:HGNC Symbol;Acc:HGNC:4604]193200.0000.0393No
82HSD17B2hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]196320.0000.0309No
83GABRA3gamma-aminobutyric acid type A receptor subunit alpha3 [Source:HGNC Symbol;Acc:HGNC:4077]198250.0000.0257No
84NR1H4nuclear receptor subfamily 1 group H member 4 [Source:HGNC Symbol;Acc:HGNC:7967]198260.0000.0257No
85TERTtelomerase reverse transcriptase [Source:HGNC Symbol;Acc:HGNC:11730]202770.0000.0135No
86KLK6kallikrein related peptidase 6 [Source:HGNC Symbol;Acc:HGNC:6367]205130.0000.0071No
87KRT34keratin 34 [Source:HGNC Symbol;Acc:HGNC:6452]217140.000-0.0253No
88CRCT1cysteine rich C-terminal 1 [Source:HGNC Symbol;Acc:HGNC:29875]219120.000-0.0307No
89RMSTrhabdomyosarcoma 2 associated transcript [Source:HGNC Symbol;Acc:HGNC:29893]219960.000-0.0329No
90CMKLR1chemerin chemokine-like receptor 1 [Source:HGNC Symbol;Acc:HGNC:2121]221560.000-0.0372No
91KRT33Bkeratin 33B [Source:HGNC Symbol;Acc:HGNC:6451]224000.000-0.0438No
92RBMY2FPRNA binding motif protein Y-linked family 2 member F, pseudogene [Source:HGNC Symbol;Acc:HGNC:23891]226900.000-0.0516No
93ANKRD36BP2ankyrin repeat domain 36B pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:33607]228210.000-0.0551No
94NPPBnatriuretic peptide B [Source:HGNC Symbol;Acc:HGNC:7940]234030.000-0.0709No
95KCNJ16potassium inwardly rectifying channel subfamily J member 16 [Source:HGNC Symbol;Acc:HGNC:6262]236000.000-0.0762No
96SNAP25synaptosome associated protein 25 [Source:HGNC Symbol;Acc:HGNC:11132]238730.000-0.0835No
97SPACA1sperm acrosome associated 1 [Source:HGNC Symbol;Acc:HGNC:14967]238890.000-0.0839No
98KCNK15potassium two pore domain channel subfamily K member 15 [Source:HGNC Symbol;Acc:HGNC:13814]239550.000-0.0857No
99ALPPalkaline phosphatase, placental [Source:HGNC Symbol;Acc:HGNC:439]240710.000-0.0888No
100FAM155Bfamily with sequence similarity 155 member B [Source:HGNC Symbol;Acc:HGNC:30701]241440.000-0.0907No
101ADGRD2adhesion G protein-coupled receptor D2 [Source:HGNC Symbol;Acc:HGNC:18651]241470.000-0.0908No
102CSF2colony stimulating factor 2 [Source:HGNC Symbol;Acc:HGNC:2434]242280.000-0.0930No
103WNT16Wnt family member 16 [Source:HGNC Symbol;Acc:HGNC:16267]245150.000-0.1007No
104HAS2hyaluronan synthase 2 [Source:HGNC Symbol;Acc:HGNC:4819]246240.000-0.1036No
105ANO2anoctamin 2 [Source:HGNC Symbol;Acc:HGNC:1183]247710.000-0.1076No
106SMPXsmall muscle protein X-linked [Source:HGNC Symbol;Acc:HGNC:11122]251300.000-0.1173No
107OCA2OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101]257060.000-0.1328No
108A2Malpha-2-macroglobulin [Source:HGNC Symbol;Acc:HGNC:7]266180.000-0.1575No
109FMO2flavin containing dimethylaniline monoxygenase 2 [Source:HGNC Symbol;Acc:HGNC:3770]267760.000-0.1617No
110CDSNcorneodesmosin [Source:HGNC Symbol;Acc:HGNC:1802]27368-0.044-0.1772No
111ATP12AATPase H+/K+ transporting non-gastric alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:13816]27428-0.052-0.1781No
112COL9A3collagen type IX alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2219]27429-0.052-0.1774No
113TAGLN3transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]27454-0.055-0.1773No
114TLR8toll like receptor 8 [Source:HGNC Symbol;Acc:HGNC:15632]27526-0.062-0.1784No
115TFPItissue factor pathway inhibitor [Source:HGNC Symbol;Acc:HGNC:11760]27729-0.085-0.1828No
116KCNA10potassium voltage-gated channel subfamily A member 10 [Source:HGNC Symbol;Acc:HGNC:6219]27804-0.096-0.1836No
117STC1stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373]28065-0.129-0.1889No
118PCDHGA11protocadherin gamma subfamily A, 11 [Source:HGNC Symbol;Acc:HGNC:8698]28257-0.153-0.1921No
119SPRY2sprouty RTK signaling antagonist 2 [Source:HGNC Symbol;Acc:HGNC:11270]28535-0.190-0.1971No
120KCNJ14potassium inwardly rectifying channel subfamily J member 14 [Source:HGNC Symbol;Acc:HGNC:6260]28740-0.219-0.1998No
121SAMD14sterile alpha motif domain containing 14 [Source:HGNC Symbol;Acc:HGNC:27312]30721-0.510-0.2467No
122STX1Asyntaxin 1A [Source:HGNC Symbol;Acc:HGNC:11433]30738-0.513-0.2405No
123CASS4Cas scaffold protein family member 4 [Source:HGNC Symbol;Acc:HGNC:15878]32049-0.773-0.2659No
124TMEM176Atransmembrane protein 176A [Source:HGNC Symbol;Acc:HGNC:24930]32831-0.970-0.2744No
125LILRA6leukocyte immunoglobulin like receptor A6 [Source:HGNC Symbol;Acc:HGNC:15495]32935-0.998-0.2642No
126KCNC2potassium voltage-gated channel subfamily C member 2 [Source:HGNC Symbol;Acc:HGNC:6234]33182-1.068-0.2570No
127OSGIN1oxidative stress induced growth inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:30093]33265-1.097-0.2449No
128GFI1growth factor independent 1 transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:4237]33342-1.122-0.2324No
129GSG1germ cell associated 1 [Source:HGNC Symbol;Acc:HGNC:19716]33532-1.180-0.2222No
130NFE2nuclear factor, erythroid 2 [Source:HGNC Symbol;Acc:HGNC:7780]33808-1.272-0.2130No
131PDE2Aphosphodiesterase 2A [Source:HGNC Symbol;Acc:HGNC:8777]34109-1.379-0.2032No
132H2AC13H2A clustered histone 13 [Source:HGNC Symbol;Acc:HGNC:4725]34812-1.678-0.2004No
133S100A5S100 calcium binding protein A5 [Source:HGNC Symbol;Acc:HGNC:10495]34988-1.765-0.1822No
134LYL1LYL1 basic helix-loop-helix family member [Source:HGNC Symbol;Acc:HGNC:6734]36088-2.599-0.1781No
135KCNAB3potassium voltage-gated channel subfamily A regulatory beta subunit 3 [Source:HGNC Symbol;Acc:HGNC:6230]36133-2.650-0.1448No
136MYCNMYCN proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7559]36423-2.956-0.1142No
137KIF24kinesin family member 24 [Source:HGNC Symbol;Acc:HGNC:19916]36499-3.022-0.0769No
138SCELsciellin [Source:HGNC Symbol;Acc:HGNC:10573]36743-3.423-0.0390No
139KIF5Akinesin family member 5A [Source:HGNC Symbol;Acc:HGNC:6323]36881-3.7140.0057No
Table: GSEA details [plain text format]



Fig 2: KRAS.BREAST_UP.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KRAS.BREAST_UP.V1_UP: Random ES distribution   
Gene set null distribution of ES for KRAS.BREAST_UP.V1_UP