Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_LPS_versus_WT_NA.greenbergcls.cls
#WT_LPS_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_LPS
GeneSetKRAS.KIDNEY_UP.V1_DN
Enrichment Score (ES)0.52619994
Normalized Enrichment Score (NES)1.3877872
Nominal p-value0.0
FDR q-value0.07718973
FWER p-Value0.202
Table: GSEA Results Summary



Fig 1: Enrichment plot: KRAS.KIDNEY_UP.V1_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1RSAD2radical S-adenosyl methionine domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30908]64.9600.0522Yes
2PTGER2prostaglandin E receptor 2 [Source:HGNC Symbol;Acc:HGNC:9594]174.8830.1034Yes
3MX1MX dynamin like GTPase 1 [Source:HGNC Symbol;Acc:HGNC:7532]314.7550.1532Yes
4MX2MX dynamin like GTPase 2 [Source:HGNC Symbol;Acc:HGNC:7533]354.7210.2029Yes
5CXCL10C-X-C motif chemokine ligand 10 [Source:HGNC Symbol;Acc:HGNC:10637]484.5920.2510Yes
6OAS12'-5'-oligoadenylate synthetase 1 [Source:HGNC Symbol;Acc:HGNC:8086]1343.8870.2897Yes
7STX11syntaxin 11 [Source:HGNC Symbol;Acc:HGNC:11429]2023.4710.3245Yes
8CD14CD14 molecule [Source:HGNC Symbol;Acc:HGNC:1628]2303.3110.3587Yes
9ETS1ETS proto-oncogene 1, transcription factor [Source:HGNC Symbol;Acc:HGNC:3488]2403.2720.3930Yes
10KCND1potassium voltage-gated channel subfamily D member 1 [Source:HGNC Symbol;Acc:HGNC:6237]3172.9370.4219Yes
11SRCSRC proto-oncogene, non-receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:11283]3332.8670.4517Yes
12ACTC1actin alpha cardiac muscle 1 [Source:HGNC Symbol;Acc:HGNC:143]4432.4980.4751Yes
13EFHD1EF-hand domain family member D1 [Source:HGNC Symbol;Acc:HGNC:29556]7011.9780.4890Yes
14IL6interleukin 6 [Source:HGNC Symbol;Acc:HGNC:6018]7321.9300.5086Yes
15GPR35G protein-coupled receptor 35 [Source:HGNC Symbol;Acc:HGNC:4492]13921.2490.5039Yes
16IL23Ainterleukin 23 subunit alpha [Source:HGNC Symbol;Acc:HGNC:15488]16061.1140.5099Yes
17HINFPhistone H4 transcription factor [Source:HGNC Symbol;Acc:HGNC:17850]17521.0320.5169Yes
18LIPElipase E, hormone sensitive type [Source:HGNC Symbol;Acc:HGNC:6621]18880.9680.5234Yes
19PDCD1programmed cell death 1 [Source:HGNC Symbol;Acc:HGNC:8760]21240.8670.5262Yes
20NESnestin [Source:HGNC Symbol;Acc:HGNC:7756]25290.7270.5229No
21CLEC3BC-type lectin domain family 3 member B [Source:HGNC Symbol;Acc:HGNC:11891]30040.5770.5162No
22APBB3amyloid beta precursor protein binding family B member 3 [Source:HGNC Symbol;Acc:HGNC:20708]32050.5290.5164No
23TACR2tachykinin receptor 2 [Source:HGNC Symbol;Acc:HGNC:11527]39070.3780.5014No
24HHIPL2HHIP like 2 [Source:HGNC Symbol;Acc:HGNC:25842]40950.3420.4999No
25THRBthyroid hormone receptor beta [Source:HGNC Symbol;Acc:HGNC:11799]42120.3210.5002No
26KCNN1potassium calcium-activated channel subfamily N member 1 [Source:HGNC Symbol;Acc:HGNC:6290]43690.2920.4990No
27SEC31BSEC31 homolog B, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:23197]43760.2910.5019No
28GATA4GATA binding protein 4 [Source:HGNC Symbol;Acc:HGNC:4173]44090.2860.5041No
29CBLCbl proto-oncogene [Source:HGNC Symbol;Acc:HGNC:1541]45300.2640.5036No
30IFI44Linterferon induced protein 44 like [Source:HGNC Symbol;Acc:HGNC:17817]46230.2480.5038No
31RPL10P17ribosomal protein L10 pseudogene 17 [Source:HGNC Symbol;Acc:HGNC:52348]46440.2460.5058No
32CBARPCACN subunit beta associated regulatory protein [Source:HGNC Symbol;Acc:HGNC:28617]49190.2050.5006No
33EREGepiregulin [Source:HGNC Symbol;Acc:HGNC:3443]53620.1390.4901No
34ASPNasporin [Source:HGNC Symbol;Acc:HGNC:14872]56090.1090.4846No
35ABCB11ATP binding cassette subfamily B member 11 [Source:HGNC Symbol;Acc:HGNC:42]56770.0990.4838No
36NPC1L1NPC1 like intracellular cholesterol transporter 1 [Source:HGNC Symbol;Acc:HGNC:7898]59490.0620.4771No
37CARD9caspase recruitment domain family member 9 [Source:HGNC Symbol;Acc:HGNC:16391]62600.0140.4689No
38CCL20C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619]64340.0000.4642No
39CCL27C-C motif chemokine ligand 27 [Source:HGNC Symbol;Acc:HGNC:10626]64510.0000.4637No
40IL1RL2interleukin 1 receptor like 2 [Source:HGNC Symbol;Acc:HGNC:5999]69350.0000.4507No
41EPHA5EPH receptor A5 [Source:HGNC Symbol;Acc:HGNC:3389]74390.0000.4371No
42SGK2serum/glucocorticoid regulated kinase 2 [Source:HGNC Symbol;Acc:HGNC:13900]78620.0000.4256No
43OR7A10olfactory receptor family 7 subfamily A member 10 [Source:HGNC Symbol;Acc:HGNC:8356]80740.0000.4199No
44PROP1PROP paired-like homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9455]83090.0000.4136No
45SIM1SIM bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:10882]83560.0000.4124No
46FOLR2folate receptor beta [Source:HGNC Symbol;Acc:HGNC:3793]95130.0000.3811No
47SERHL2serine hydrolase like 2 [Source:HGNC Symbol;Acc:HGNC:29446]95930.0000.3789No
48KCNF1potassium voltage-gated channel modifier subfamily F member 1 [Source:HGNC Symbol;Acc:HGNC:6246]97970.0000.3734No
49CETPcholesteryl ester transfer protein [Source:HGNC Symbol;Acc:HGNC:1869]98650.0000.3716No
50GRM4glutamate metabotropic receptor 4 [Source:HGNC Symbol;Acc:HGNC:4596]99620.0000.3690No
51GRM8glutamate metabotropic receptor 8 [Source:HGNC Symbol;Acc:HGNC:4600]99650.0000.3690No
52AADACarylacetamide deacetylase [Source:HGNC Symbol;Acc:HGNC:17]103630.0000.3582No
53LRRC31leucine rich repeat containing 31 [Source:HGNC Symbol;Acc:HGNC:26261]113550.0000.3314No
54IFI30IFI30 lysosomal thiol reductase [Source:HGNC Symbol;Acc:HGNC:5398]114560.0000.3287No
55PRG2proteoglycan 2, pro eosinophil major basic protein [Source:HGNC Symbol;Acc:HGNC:9362]114810.0000.3281No
56LMAN1Llectin, mannose binding 1 like [Source:HGNC Symbol;Acc:HGNC:6632]117880.0000.3198No
57SLC6A20solute carrier family 6 member 20 [Source:HGNC Symbol;Acc:HGNC:30927]118120.0000.3192No
58RYR2ryanodine receptor 2 [Source:HGNC Symbol;Acc:HGNC:10484]118370.0000.3185No
59CNN1calponin 1 [Source:HGNC Symbol;Acc:HGNC:2155]122200.0000.3082No
60ADAMTSL2ADAMTS like 2 [Source:HGNC Symbol;Acc:HGNC:14631]126140.0000.2975No
61TENM2teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]127280.0000.2945No
62LILRA4leukocyte immunoglobulin like receptor A4 [Source:HGNC Symbol;Acc:HGNC:15503]133870.0000.2767No
63LILRB4leukocyte immunoglobulin like receptor B4 [Source:HGNC Symbol;Acc:HGNC:6608]133950.0000.2765No
64IL26interleukin 26 [Source:HGNC Symbol;Acc:HGNC:17119]137160.0000.2678No
65TMEM262transmembrane protein 262 [Source:HGNC Symbol;Acc:HGNC:49389]137950.0000.2657No
66KRT2keratin 2 [Source:HGNC Symbol;Acc:HGNC:6439]141040.0000.2574No
67B3GALT5beta-1,3-galactosyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:920]144200.0000.2489No
68C3orf36chromosome 3 putative open reading frame 36 [Source:HGNC Symbol;Acc:HGNC:26170]159880.0000.2065No
69TTLL2tubulin tyrosine ligase like 2 [Source:HGNC Symbol;Acc:HGNC:21211]161450.0000.2022No
70HYAL4hyaluronidase 4 [Source:HGNC Symbol;Acc:HGNC:5323]162270.0000.2000No
71HRGhistidine rich glycoprotein [Source:HGNC Symbol;Acc:HGNC:5181]173890.0000.1686No
72SLC9A3solute carrier family 9 member A3 [Source:HGNC Symbol;Acc:HGNC:11073]174610.0000.1667No
73CHRNGcholinergic receptor nicotinic gamma subunit [Source:HGNC Symbol;Acc:HGNC:1967]177140.0000.1599No
74CHRM2cholinergic receptor muscarinic 2 [Source:HGNC Symbol;Acc:HGNC:1951]177240.0000.1596No
75IFNA17interferon alpha 17 [Source:HGNC Symbol;Acc:HGNC:5422]180720.0000.1503No
76PTPRCAPprotein tyrosine phosphatase receptor type C associated protein [Source:HGNC Symbol;Acc:HGNC:9667]180780.0000.1501No
77CXCL11C-X-C motif chemokine ligand 11 [Source:HGNC Symbol;Acc:HGNC:10638]187850.0000.1310No
78DSG3desmoglein 3 [Source:HGNC Symbol;Acc:HGNC:3050]188020.0000.1306No
79MSCmusculin [Source:HGNC Symbol;Acc:HGNC:7321]189170.0000.1275No
80BMP4bone morphogenetic protein 4 [Source:HGNC Symbol;Acc:HGNC:1071]189380.0000.1270No
81EPS8L3EPS8 like 3 [Source:HGNC Symbol;Acc:HGNC:21297]189990.0000.1253No
82NGFnerve growth factor [Source:HGNC Symbol;Acc:HGNC:7808]191400.0000.1215No
83HSD17B2hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]196320.0000.1083No
84NR1I3nuclear receptor subfamily 1 group I member 3 [Source:HGNC Symbol;Acc:HGNC:7969]198010.0000.1037No
85KLHDC8Akelch domain containing 8A [Source:HGNC Symbol;Acc:HGNC:25573]199510.0000.0997No
86TCF21transcription factor 21 [Source:HGNC Symbol;Acc:HGNC:11632]203190.0000.0898No
87KLK1kallikrein 1 [Source:HGNC Symbol;Acc:HGNC:6357]205050.0000.0847No
88EDN2endothelin 2 [Source:HGNC Symbol;Acc:HGNC:3177]208950.0000.0742No
89INSL5insulin like 5 [Source:HGNC Symbol;Acc:HGNC:6088]216200.0000.0546No
90INSL4insulin like 4 [Source:HGNC Symbol;Acc:HGNC:6087]216210.0000.0546No
91KRT17keratin 17 [Source:HGNC Symbol;Acc:HGNC:6427]217580.0000.0510No
92RASGRF1Ras protein specific guanine nucleotide releasing factor 1 [Source:HGNC Symbol;Acc:HGNC:9875]226450.0000.0270No
93ATP1B4ATPase Na+/K+ transporting family member beta 4 [Source:HGNC Symbol;Acc:HGNC:808]230680.0000.0156No
94FOXA1forkhead box A1 [Source:HGNC Symbol;Acc:HGNC:5021]233990.0000.0066No
95NPPBnatriuretic peptide B [Source:HGNC Symbol;Acc:HGNC:7940]234030.0000.0065No
96TCP10L3t-complex 10 like 3, pseudogene [Source:HGNC Symbol;Acc:HGNC:11656]235520.0000.0025No
97IGKV3D-15immunoglobulin kappa variable 3D-15 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:5824]235680.0000.0021No
98NPFFR1neuropeptide FF receptor 1 [Source:HGNC Symbol;Acc:HGNC:17425]239430.000-0.0080No
99CST5cystatin D [Source:HGNC Symbol;Acc:HGNC:2477]244250.000-0.0210No
100CHRNA9cholinergic receptor nicotinic alpha 9 subunit [Source:HGNC Symbol;Acc:HGNC:14079]244890.000-0.0227No
101PRSS21serine protease 21 [Source:HGNC Symbol;Acc:HGNC:9485]249390.000-0.0349No
102CAPN9calpain 9 [Source:HGNC Symbol;Acc:HGNC:1486]255610.000-0.0517No
103PAGE1PAGE family member 1 [Source:HGNC Symbol;Acc:HGNC:4107]261600.000-0.0678No
104MAGEA10MAGE family member A10 [Source:HGNC Symbol;Acc:HGNC:6797]261650.000-0.0679No
105ITIH5inter-alpha-trypsin inhibitor heavy chain 5 [Source:HGNC Symbol;Acc:HGNC:21449]265520.000-0.0784No
106ACEangiotensin I converting enzyme [Source:HGNC Symbol;Acc:HGNC:2707]267280.000-0.0831No
107BAATbile acid-CoA:amino acid N-acyltransferase [Source:HGNC Symbol;Acc:HGNC:932]267500.000-0.0837No
108AGRPagouti related neuropeptide [Source:HGNC Symbol;Acc:HGNC:330]27131-0.004-0.0939No
109THBDthrombomodulin [Source:HGNC Symbol;Acc:HGNC:11784]27398-0.047-0.1006No
110MDFIMyoD family inhibitor [Source:HGNC Symbol;Acc:HGNC:6967]27485-0.057-0.1024No
111RBISribosomal biogenesis factor [Source:HGNC Symbol;Acc:HGNC:32235]27511-0.060-0.1024No
112SRD5A3steroid 5 alpha-reductase 3 [Source:HGNC Symbol;Acc:HGNC:25812]27906-0.110-0.1119No
113SLC5A5solute carrier family 5 member 5 [Source:HGNC Symbol;Acc:HGNC:11040]28166-0.141-0.1174No
114GRM2glutamate metabotropic receptor 2 [Source:HGNC Symbol;Acc:HGNC:4594]28233-0.150-0.1176No
115VILLvillin like [Source:HGNC Symbol;Acc:HGNC:30906]28659-0.207-0.1269No
116BRDTbromodomain testis associated [Source:HGNC Symbol;Acc:HGNC:1105]29027-0.257-0.1342No
117FCHO1FCH and mu domain containing endocytic adaptor 1 [Source:HGNC Symbol;Acc:HGNC:29002]29099-0.267-0.1333No
118SPATA6spermatogenesis associated 6 [Source:HGNC Symbol;Acc:HGNC:18309]29327-0.299-0.1362No
119ZDHHC8P1ZDHHC8 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:26461]29386-0.311-0.1345No
120DDX51DEAD-box helicase 51 [Source:HGNC Symbol;Acc:HGNC:20082]30776-0.520-0.1666No
121DRC3dynein regulatory complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25384]32281-0.827-0.1986No
122EGFL7EGF like domain multiple 7 [Source:HGNC Symbol;Acc:HGNC:20594]32775-0.957-0.2019No
123SEMA5Asemaphorin 5A [Source:HGNC Symbol;Acc:HGNC:10736]33412-1.141-0.2070No
124TYROBPtransmembrane immune signaling adaptor TYROBP [Source:HGNC Symbol;Acc:HGNC:12449]34116-1.382-0.2115No
125DEPDC5DEP domain containing 5, GATOR1 subcomplex subunit [Source:HGNC Symbol;Acc:HGNC:18423]34242-1.430-0.1998No
126PHLDA3pleckstrin homology like domain family A member 3 [Source:HGNC Symbol;Acc:HGNC:8934]34689-1.623-0.1947No
127H2AC13H2A clustered histone 13 [Source:HGNC Symbol;Acc:HGNC:4725]34812-1.678-0.1803No
128ECEL1endothelin converting enzyme like 1 [Source:HGNC Symbol;Acc:HGNC:3147]35562-2.123-0.1782No
129KIF21Bkinesin family member 21B [Source:HGNC Symbol;Acc:HGNC:29442]35696-2.231-0.1583No
130KLF3Kruppel like factor 3 [Source:HGNC Symbol;Acc:HGNC:16516]35788-2.305-0.1364No
131ABCA3ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]35910-2.418-0.1142No
132LFNGLFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:6560]36488-3.010-0.0981No
133TREM2triggering receptor expressed on myeloid cells 2 [Source:HGNC Symbol;Acc:HGNC:17761]36763-3.461-0.0690No
134CACNA1Scalcium voltage-gated channel subunit alpha1 S [Source:HGNC Symbol;Acc:HGNC:1397]36873-3.687-0.0331No
135CSF1Rcolony stimulating factor 1 receptor [Source:HGNC Symbol;Acc:HGNC:2433]36874-3.6880.0058No
Table: GSEA details [plain text format]



Fig 2: KRAS.KIDNEY_UP.V1_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KRAS.KIDNEY_UP.V1_DN: Random ES distribution   
Gene set null distribution of ES for KRAS.KIDNEY_UP.V1_DN