Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_LPS_versus_WT_NA.greenbergcls.cls
#WT_LPS_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_LPS
GeneSetKRAS.LUNG.BREAST_UP.V1_UP
Enrichment Score (ES)0.6135412
Normalized Enrichment Score (NES)1.6240028
Nominal p-value0.0
FDR q-value0.049850065
FWER p-Value0.029
Table: GSEA Results Summary



Fig 1: Enrichment plot: KRAS.LUNG.BREAST_UP.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]14.9750.0538Yes
2PTGS2prostaglandin-endoperoxide synthase 2 [Source:HGNC Symbol;Acc:HGNC:9605]74.9520.1073Yes
3CSF3colony stimulating factor 3 [Source:HGNC Symbol;Acc:HGNC:2438]134.9200.1604Yes
4TRAF1TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]504.5530.2087Yes
5ISG20interferon stimulated exonuclease gene 20 [Source:HGNC Symbol;Acc:HGNC:6130]654.4130.2561Yes
6GLRXglutaredoxin [Source:HGNC Symbol;Acc:HGNC:4330]1423.8350.2956Yes
7TNFAIP3TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]1583.7220.3354Yes
8TNFSF15TNF superfamily member 15 [Source:HGNC Symbol;Acc:HGNC:11931]1593.7110.3756Yes
9ETS1ETS proto-oncogene 1, transcription factor [Source:HGNC Symbol;Acc:HGNC:3488]2403.2720.4089Yes
10DHRS9dehydrogenase/reductase 9 [Source:HGNC Symbol;Acc:HGNC:16888]3642.7240.4350Yes
11POLMDNA polymerase mu [Source:HGNC Symbol;Acc:HGNC:9185]4732.4070.4582Yes
12MMP9matrix metallopeptidase 9 [Source:HGNC Symbol;Acc:HGNC:7176]4742.4070.4842Yes
13ID2inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]4872.3860.5097Yes
14IL13RA2interleukin 13 receptor subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:5975]5322.2890.5333Yes
15DOCK4dedicator of cytokinesis 4 [Source:HGNC Symbol;Acc:HGNC:19192]6402.0840.5530Yes
16IL1RL1interleukin 1 receptor like 1 [Source:HGNC Symbol;Acc:HGNC:5998]8781.6880.5648Yes
17GPR4G protein-coupled receptor 4 [Source:HGNC Symbol;Acc:HGNC:4497]12851.3220.5682Yes
18IL23Ainterleukin 23 subunit alpha [Source:HGNC Symbol;Acc:HGNC:15488]16061.1140.5715Yes
19BIRC3baculoviral IAP repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:591]16741.0680.5813Yes
20INHBAinhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066]16761.0670.5928Yes
21OSBP2oxysterol binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8504]17091.0500.6033Yes
22FCRL2Fc receptor like 2 [Source:HGNC Symbol;Acc:HGNC:14875]23760.7730.5937Yes
23HBEGFheparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059]25790.7080.5959Yes
24PRDM1PR/SET domain 1 [Source:HGNC Symbol;Acc:HGNC:9346]26510.6830.6013Yes
25CXCL2C-X-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:4603]28620.6180.6023Yes
26CTNNA2catenin alpha 2 [Source:HGNC Symbol;Acc:HGNC:2510]28990.6080.6079Yes
27ADAMTS6ADAM metallopeptidase with thrombospondin type 1 motif 6 [Source:HGNC Symbol;Acc:HGNC:222]31220.5530.6079Yes
28SH2D2ASH2 domain containing 2A [Source:HGNC Symbol;Acc:HGNC:10821]31360.5510.6135Yes
29CD247CD247 molecule [Source:HGNC Symbol;Acc:HGNC:1677]45040.2680.5794No
30ADAM8ADAM metallopeptidase domain 8 [Source:HGNC Symbol;Acc:HGNC:215]45760.2570.5803No
31MMP10matrix metallopeptidase 10 [Source:HGNC Symbol;Acc:HGNC:7156]48470.2140.5753No
32RREB1ras responsive element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:10449]54850.1220.5594No
33ST3GAL6ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:18080]55340.1170.5594No
34TFDP3transcription factor Dp family member 3 [Source:HGNC Symbol;Acc:HGNC:24603]56010.1090.5588No
35MKRN3makorin ring finger protein 3 [Source:HGNC Symbol;Acc:HGNC:7114]61150.0370.5453No
36ZNF639zinc finger protein 639 [Source:HGNC Symbol;Acc:HGNC:30950]63510.0010.5389No
37CCL20C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619]64340.0000.5367No
38SCG5secretogranin V [Source:HGNC Symbol;Acc:HGNC:10816]65730.0000.5330No
39RNASE1ribonuclease A family member 1, pancreatic [Source:HGNC Symbol;Acc:HGNC:10044]72470.0000.5148No
40SLCO5A1solute carrier organic anion transporter family member 5A1 [Source:HGNC Symbol;Acc:HGNC:19046]72670.0000.5143No
41SHOXshort stature homeobox [Source:HGNC Symbol;Acc:HGNC:10853]81480.0000.4904No
42CALB1calbindin 1 [Source:HGNC Symbol;Acc:HGNC:1434]87330.0000.4746No
43CLSTN2calsyntenin 2 [Source:HGNC Symbol;Acc:HGNC:17448]88400.0000.4718No
44TTC22tetratricopeptide repeat domain 22 [Source:HGNC Symbol;Acc:HGNC:26067]93720.0000.4574No
45ADAM19ADAM metallopeptidase domain 19 [Source:HGNC Symbol;Acc:HGNC:197]99270.0000.4424No
46LAT2linker for activation of T cells family member 2 [Source:HGNC Symbol;Acc:HGNC:12749]104460.0000.4284No
47FAM174Bfamily with sequence similarity 174 member B [Source:HGNC Symbol;Acc:HGNC:34339]104730.0000.4277No
48PPBPpro-platelet basic protein [Source:HGNC Symbol;Acc:HGNC:9240]109450.0000.4149No
49TSPAN1tetraspanin 1 [Source:HGNC Symbol;Acc:HGNC:20657]114770.0000.4006No
50CLPScolipase [Source:HGNC Symbol;Acc:HGNC:2085]116400.0000.3962No
51IGFBP3insulin like growth factor binding protein 3 [Source:HGNC Symbol;Acc:HGNC:5472]117300.0000.3938No
52ESM1endothelial cell specific molecule 1 [Source:HGNC Symbol;Acc:HGNC:3466]118410.0000.3908No
53TAAR5trace amine associated receptor 5 [Source:HGNC Symbol;Acc:HGNC:30236]125880.0000.3706No
54GBA3glucosylceramidase beta 3 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:19069]126890.0000.3679No
55RBP4retinol binding protein 4 [Source:HGNC Symbol;Acc:HGNC:9922]128250.0000.3642No
56RBMXL2RBMX like 2 [Source:HGNC Symbol;Acc:HGNC:17886]129500.0000.3609No
57GULP1GULP PTB domain containing engulfment adaptor 1 [Source:HGNC Symbol;Acc:HGNC:18649]131120.0000.3565No
58HOXD11homeobox D11 [Source:HGNC Symbol;Acc:HGNC:5134]131820.0000.3547No
59OR2B6olfactory receptor family 2 subfamily B member 6 [Source:HGNC Symbol;Acc:HGNC:8241]134290.0000.3480No
60KIAA1549LKIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]136380.0000.3424No
61RELNreelin [Source:HGNC Symbol;Acc:HGNC:9957]137620.0000.3390No
62IL37interleukin 37 [Source:HGNC Symbol;Acc:HGNC:15563]137770.0000.3387No
63RETNresistin [Source:HGNC Symbol;Acc:HGNC:20389]138770.0000.3360No
64HSD11B1hydroxysteroid 11-beta dehydrogenase 1 [Source:HGNC Symbol;Acc:HGNC:5208]143260.0000.3239No
65ZP4zona pellucida glycoprotein 4 [Source:HGNC Symbol;Acc:HGNC:15770]146930.0000.3140No
66SPINK1serine peptidase inhibitor Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]153330.0000.2967No
67G0S2G0/G1 switch 2 [Source:HGNC Symbol;Acc:HGNC:30229]157930.0000.2842No
68IL1R2interleukin 1 receptor type 2 [Source:HGNC Symbol;Acc:HGNC:5994]158690.0000.2822No
69AMELYamelogenin Y-linked [Source:HGNC Symbol;Acc:HGNC:462]159650.0000.2796No
70MGLLmonoglyceride lipase [Source:HGNC Symbol;Acc:HGNC:17038]170720.0000.2497No
71GRPgastrin releasing peptide [Source:HGNC Symbol;Acc:HGNC:4605]170740.0000.2497No
72CEACAM3CEA cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:1815]177810.0000.2306No
73IGHV3-48immunoglobulin heavy variable 3-48 [Source:HGNC Symbol;Acc:HGNC:5606]181240.0000.2213No
74BMP6bone morphogenetic protein 6 [Source:HGNC Symbol;Acc:HGNC:1073]189350.0000.1994No
75MMP1matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155]189640.0000.1986No
76NRLneural retina leucine zipper [Source:HGNC Symbol;Acc:HGNC:8002]192440.0000.1911No
77CXCL8C-X-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:6025]193090.0000.1894No
78CXCL1C-X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:4602]193180.0000.1891No
79CXCL3C-X-C motif chemokine ligand 3 [Source:HGNC Symbol;Acc:HGNC:4604]193200.0000.1891No
80CXCL5C-X-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10642]193210.0000.1891No
81TBX3T-box transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:11602]195790.0000.1822No
82HSD17B2hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]196320.0000.1808No
83GABRA3gamma-aminobutyric acid type A receptor subunit alpha3 [Source:HGNC Symbol;Acc:HGNC:4077]198250.0000.1756No
84NR1H4nuclear receptor subfamily 1 group H member 4 [Source:HGNC Symbol;Acc:HGNC:7967]198260.0000.1756No
85PRLprolactin [Source:HGNC Symbol;Acc:HGNC:9445]199570.0000.1720No
86PRYPTPN13 like Y-linked [Source:HGNC Symbol;Acc:HGNC:14024]199630.0000.1719No
87TERTtelomerase reverse transcriptase [Source:HGNC Symbol;Acc:HGNC:11730]202770.0000.1634No
88KRT34keratin 34 [Source:HGNC Symbol;Acc:HGNC:6452]217140.0000.1246No
89CRCT1cysteine rich C-terminal 1 [Source:HGNC Symbol;Acc:HGNC:29875]219120.0000.1192No
90RMSTrhabdomyosarcoma 2 associated transcript [Source:HGNC Symbol;Acc:HGNC:29893]219960.0000.1170No
91NAV3neuron navigator 3 [Source:HGNC Symbol;Acc:HGNC:15998]221210.0000.1136No
92CMKLR1chemerin chemokine-like receptor 1 [Source:HGNC Symbol;Acc:HGNC:2121]221560.0000.1127No
93CD1ACD1a molecule [Source:HGNC Symbol;Acc:HGNC:1634]227360.0000.0970No
94CCR6C-C motif chemokine receptor 6 [Source:HGNC Symbol;Acc:HGNC:1607]227740.0000.0960No
95NELL2neural EGFL like 2 [Source:HGNC Symbol;Acc:HGNC:7751]233220.0000.0812No
96SLC25A31solute carrier family 25 member 31 [Source:HGNC Symbol;Acc:HGNC:25319]233240.0000.0812No
97NPPBnatriuretic peptide B [Source:HGNC Symbol;Acc:HGNC:7940]234030.0000.0791No
98TSPY1testis specific protein Y-linked 1 [Source:HGNC Symbol;Acc:HGNC:12381]235030.0000.0764No
99SNAP25synaptosome associated protein 25 [Source:HGNC Symbol;Acc:HGNC:11132]238730.0000.0664No
100KCNK15potassium two pore domain channel subfamily K member 15 [Source:HGNC Symbol;Acc:HGNC:13814]239550.0000.0642No
101DNAH9dynein axonemal heavy chain 9 [Source:HGNC Symbol;Acc:HGNC:2953]241230.0000.0597No
102FAM155Bfamily with sequence similarity 155 member B [Source:HGNC Symbol;Acc:HGNC:30701]241440.0000.0592No
103CSF2colony stimulating factor 2 [Source:HGNC Symbol;Acc:HGNC:2434]242280.0000.0569No
104SNAP91synaptosome associated protein 91 [Source:HGNC Symbol;Acc:HGNC:14986]243860.0000.0527No
105IFNA8interferon alpha 8 [Source:HGNC Symbol;Acc:HGNC:5429]244020.0000.0523No
106CHRNA2cholinergic receptor nicotinic alpha 2 subunit [Source:HGNC Symbol;Acc:HGNC:1956]244800.0000.0502No
107HAS2hyaluronan synthase 2 [Source:HGNC Symbol;Acc:HGNC:4819]246240.0000.0463No
108PTPRRprotein tyrosine phosphatase receptor type R [Source:HGNC Symbol;Acc:HGNC:9680]247490.0000.0430No
109PRSS3serine protease 3 [Source:HGNC Symbol;Acc:HGNC:9486]249970.0000.0363No
110SMPXsmall muscle protein X-linked [Source:HGNC Symbol;Acc:HGNC:11122]251300.0000.0327No
111PDCD1LG2programmed cell death 1 ligand 2 [Source:HGNC Symbol;Acc:HGNC:18731]252280.0000.0301No
112FNDC8fibronectin type III domain containing 8 [Source:HGNC Symbol;Acc:HGNC:25286]254980.0000.0228No
113ITGA2integrin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6137]260750.0000.0072No
114A2Malpha-2-macroglobulin [Source:HGNC Symbol;Acc:HGNC:7]266180.000-0.0074No
115MYH2myosin heavy chain 2 [Source:HGNC Symbol;Acc:HGNC:7572]27290-0.032-0.0253No
116CDSNcorneodesmosin [Source:HGNC Symbol;Acc:HGNC:1802]27368-0.044-0.0269No
117TAGLN3transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]27454-0.055-0.0286No
118SEMA3Bsemaphorin 3B [Source:HGNC Symbol;Acc:HGNC:10724]27874-0.106-0.0388No
119STC1stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373]28065-0.129-0.0425No
120LDB3LIM domain binding 3 [Source:HGNC Symbol;Acc:HGNC:15710]28193-0.144-0.0444No
121NDOR1NADPH dependent diflavin oxidoreductase 1 [Source:HGNC Symbol;Acc:HGNC:29838]28345-0.163-0.0467No
122SPRY2sprouty RTK signaling antagonist 2 [Source:HGNC Symbol;Acc:HGNC:11270]28535-0.190-0.0498No
123GYPCglycophorin C (Gerbich blood group) [Source:HGNC Symbol;Acc:HGNC:4704]28594-0.199-0.0492No
124RPS4Y1ribosomal protein S4 Y-linked 1 [Source:HGNC Symbol;Acc:HGNC:10425]28722-0.216-0.0503No
125KCNJ14potassium inwardly rectifying channel subfamily J member 14 [Source:HGNC Symbol;Acc:HGNC:6260]28740-0.219-0.0484No
126HPNhepsin [Source:HGNC Symbol;Acc:HGNC:5155]29933-0.388-0.0764No
127AKT2AKT serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:392]29965-0.392-0.0730No
128CD37CD37 molecule [Source:HGNC Symbol;Acc:HGNC:1666]30664-0.500-0.0865No
129LILRA6leukocyte immunoglobulin like receptor A6 [Source:HGNC Symbol;Acc:HGNC:15495]32935-0.998-0.1371No
130ITPKAinositol-trisphosphate 3-kinase A [Source:HGNC Symbol;Acc:HGNC:6178]33118-1.051-0.1307No
131KCNC2potassium voltage-gated channel subfamily C member 2 [Source:HGNC Symbol;Acc:HGNC:6234]33182-1.068-0.1208No
132OSGIN1oxidative stress induced growth inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:30093]33265-1.097-0.1112No
133GFI1growth factor independent 1 transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:4237]33342-1.122-0.1011No
134PDE2Aphosphodiesterase 2A [Source:HGNC Symbol;Acc:HGNC:8777]34109-1.379-0.1069No
135ATG10autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]34225-1.422-0.0946No
136ANGPTL4angiopoietin like 4 [Source:HGNC Symbol;Acc:HGNC:16039]34375-1.491-0.0825No
137KIF5Ckinesin family member 5C [Source:HGNC Symbol;Acc:HGNC:6325]34833-1.687-0.0766No
138SLCO4A1solute carrier organic anion transporter family member 4A1 [Source:HGNC Symbol;Acc:HGNC:10953]35807-2.321-0.0778No
139KCNC1potassium voltage-gated channel subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:6233]36682-3.302-0.0657No
140CCDC181coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]36716-3.375-0.0301No
141KIF5Akinesin family member 5A [Source:HGNC Symbol;Acc:HGNC:6323]36881-3.7140.0057No
Table: GSEA details [plain text format]



Fig 2: KRAS.LUNG.BREAST_UP.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KRAS.LUNG.BREAST_UP.V1_UP: Random ES distribution   
Gene set null distribution of ES for KRAS.LUNG.BREAST_UP.V1_UP