Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_LPS_versus_WT_NA.greenbergcls.cls
#WT_LPS_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_LPS
GeneSetP53_DN.V2_UP
Enrichment Score (ES)0.4974273
Normalized Enrichment Score (NES)1.331493
Nominal p-value0.0
FDR q-value0.06999668
FWER p-Value0.277
Table: GSEA Results Summary



Fig 1: Enrichment plot: P53_DN.V2_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IL1RNinterleukin 1 receptor antagonist [Source:HGNC Symbol;Acc:HGNC:6000]124.9220.0504Yes
2CCL4C-C motif chemokine ligand 4 [Source:HGNC Symbol;Acc:HGNC:10630]374.7180.0984Yes
3IER3immediate early response 3 [Source:HGNC Symbol;Acc:HGNC:5392]1064.0640.1384Yes
4NFKBIANFKB inhibitor alpha [Source:HGNC Symbol;Acc:HGNC:7797]1433.8280.1769Yes
5TNFAIP3TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]1583.7220.2148Yes
6CD83CD83 molecule [Source:HGNC Symbol;Acc:HGNC:1703]1663.6780.2525Yes
7OSGIN2oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]1783.6010.2893Yes
8FOSL2FOS like 2, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:3798]3002.9970.3169Yes
9HAO1hydroxyacid oxidase 1 [Source:HGNC Symbol;Acc:HGNC:4809]3052.9780.3475Yes
10CLCF1cardiotrophin like cytokine factor 1 [Source:HGNC Symbol;Acc:HGNC:17412]4612.4480.3686Yes
11P2RY6pyrimidinergic receptor P2Y6 [Source:HGNC Symbol;Acc:HGNC:8543]7271.9400.3814Yes
12LRRC32leucine rich repeat containing 32 [Source:HGNC Symbol;Acc:HGNC:4161]7671.8710.3996Yes
13PTK2Bprotein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]9911.5630.4097Yes
14MMP13matrix metallopeptidase 13 [Source:HGNC Symbol;Acc:HGNC:7159]10731.4920.4228Yes
15IKZF1IKAROS family zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:13176]11761.4120.4346Yes
16SDC4syndecan 4 [Source:HGNC Symbol;Acc:HGNC:10661]12841.3250.4454Yes
17CH25Hcholesterol 25-hydroxylase [Source:HGNC Symbol;Acc:HGNC:1907]12871.3210.4589Yes
18NCKAP1LNCK associated protein 1 like [Source:HGNC Symbol;Acc:HGNC:4862]15511.1490.4637Yes
19EVI2Aecotropic viral integration site 2A [Source:HGNC Symbol;Acc:HGNC:3499]16711.0720.4715Yes
20TUBB1tubulin beta 1 class VI [Source:HGNC Symbol;Acc:HGNC:16257]18640.9820.4764Yes
21PRKCEprotein kinase C epsilon [Source:HGNC Symbol;Acc:HGNC:9401]18870.9690.4858Yes
22RELBRELB proto-oncogene, NF-kB subunit [Source:HGNC Symbol;Acc:HGNC:9956]22000.8380.4860Yes
23SYN1synapsin I [Source:HGNC Symbol;Acc:HGNC:11494]23190.7940.4910Yes
24FCRL2Fc receptor like 2 [Source:HGNC Symbol;Acc:HGNC:14875]23760.7730.4974Yes
25CXCL2C-X-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:4603]28620.6180.4907No
26H2AC4H2A clustered histone 4 [Source:HGNC Symbol;Acc:HGNC:4734]37300.4140.4715No
27MPZmyelin protein zero [Source:HGNC Symbol;Acc:HGNC:7225]39400.3710.4696No
28PRRG3proline rich and Gla domain 3 [Source:HGNC Symbol;Acc:HGNC:30798]39640.3670.4728No
29MMP3matrix metallopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:7173]57310.0920.4259No
30GP5glycoprotein V platelet [Source:HGNC Symbol;Acc:HGNC:4443]58770.0720.4227No
31MT1Gmetallothionein 1G [Source:HGNC Symbol;Acc:HGNC:7399]60660.0430.4181No
32TNRtenascin R [Source:HGNC Symbol;Acc:HGNC:11953]61000.0390.4176No
33KCNMB1potassium calcium-activated channel subfamily M regulatory beta subunit 1 [Source:HGNC Symbol;Acc:HGNC:6285]61080.0380.4178No
34CCL20C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619]64340.0000.4090No
35FGF22fibroblast growth factor 22 [Source:HGNC Symbol;Acc:HGNC:3679]69180.0000.3959No
36PRDM11PR/SET domain 11 [Source:HGNC Symbol;Acc:HGNC:13996]69630.0000.3948No
37ANGPTL3angiopoietin like 3 [Source:HGNC Symbol;Acc:HGNC:491]69820.0000.3943No
38PPEF1protein phosphatase with EF-hand domain 1 [Source:HGNC Symbol;Acc:HGNC:9243]70200.0000.3933No
39C4BPAcomplement component 4 binding protein alpha [Source:HGNC Symbol;Acc:HGNC:1325]72190.0000.3879No
40PKD2L1polycystin 2 like 1, transient receptor potential cation channel [Source:HGNC Symbol;Acc:HGNC:9011]78110.0000.3719No
41GUCY2Dguanylate cyclase 2D, retinal [Source:HGNC Symbol;Acc:HGNC:4689]83700.0000.3568No
42GPA33glycoprotein A33 [Source:HGNC Symbol;Acc:HGNC:4445]84900.0000.3536No
43BARX2BARX homeobox 2 [Source:HGNC Symbol;Acc:HGNC:956]85680.0000.3515No
44CDH4cadherin 4 [Source:HGNC Symbol;Acc:HGNC:1763]94640.0000.3273No
45CLEC1AC-type lectin domain family 1 member A [Source:HGNC Symbol;Acc:HGNC:24355]94920.0000.3265No
46TNFRSF9TNF receptor superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11924]98020.0000.3182No
47KCNK3potassium two pore domain channel subfamily K member 3 [Source:HGNC Symbol;Acc:HGNC:6278]98430.0000.3171No
48ADAM12ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]99290.0000.3148No
49HS3ST2heparan sulfate-glucosamine 3-sulfotransferase 2 [Source:HGNC Symbol;Acc:HGNC:5195]100020.0000.3128No
50APOL3apolipoprotein L3 [Source:HGNC Symbol;Acc:HGNC:14868]100730.0000.3109No
51GSC2goosecoid homeobox 2 [Source:HGNC Symbol;Acc:HGNC:4613]101550.0000.3088No
52SPRR2Csmall proline rich protein 2C (pseudogene) [Source:HGNC Symbol;Acc:HGNC:11263]101810.0000.3081No
53SPRR1Bsmall proline rich protein 1B [Source:HGNC Symbol;Acc:HGNC:11260]101900.0000.3079No
54CYP2D6cytochrome P450 family 2 subfamily D member 6 [Source:HGNC Symbol;Acc:HGNC:2625]103080.0000.3047No
55IL1RAPL1interleukin 1 receptor accessory protein like 1 [Source:HGNC Symbol;Acc:HGNC:5996]103980.0000.3023No
56RFPL2ret finger protein like 2 [Source:HGNC Symbol;Acc:HGNC:9979]105160.0000.2991No
57NTRK3neurotrophic receptor tyrosine kinase 3 [Source:HGNC Symbol;Acc:HGNC:8033]109230.0000.2881No
58GYPBglycophorin B (MNS blood group) [Source:HGNC Symbol;Acc:HGNC:4703]118080.0000.2642No
59NTSR1neurotensin receptor 1 [Source:HGNC Symbol;Acc:HGNC:8039]118160.0000.2640No
60LGSNlengsin, lens protein with glutamine synthetase domain [Source:HGNC Symbol;Acc:HGNC:21016]120700.0000.2572No
61PTX3pentraxin 3 [Source:HGNC Symbol;Acc:HGNC:9692]122850.0000.2514No
62AVPR2arginine vasopressin receptor 2 [Source:HGNC Symbol;Acc:HGNC:897]126740.0000.2409No
63PCDHA6protocadherin alpha 6 [Source:HGNC Symbol;Acc:HGNC:8672]139090.0000.2075No
64ANXA10annexin A10 [Source:HGNC Symbol;Acc:HGNC:534]142410.0000.1985No
65TNNI3KTNNI3 interacting kinase [Source:HGNC Symbol;Acc:HGNC:19661]143900.0000.1945No
66SPINK1serine peptidase inhibitor Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]153330.0000.1690No
67TPTEtransmembrane phosphatase with tensin homology [Source:HGNC Symbol;Acc:HGNC:12023]155090.0000.1643No
68HTR1E5-hydroxytryptamine receptor 1E [Source:HGNC Symbol;Acc:HGNC:5291]155760.0000.1625No
69BPIbactericidal permeability increasing protein [Source:HGNC Symbol;Acc:HGNC:1095]155960.0000.1620No
70IL36Ainterleukin 36 alpha [Source:HGNC Symbol;Acc:HGNC:15562]156160.0000.1614No
71CA3carbonic anhydrase 3 [Source:HGNC Symbol;Acc:HGNC:1374]156930.0000.1594No
72AMELXamelogenin X-linked [Source:HGNC Symbol;Acc:HGNC:461]159640.0000.1521No
73FPR3formyl peptide receptor 3 [Source:HGNC Symbol;Acc:HGNC:3828]160630.0000.1494No
74RNF39ring finger protein 39 [Source:HGNC Symbol;Acc:HGNC:18064]164900.0000.1379No
75SLC38A3solute carrier family 38 member 3 [Source:HGNC Symbol;Acc:HGNC:18044]174690.0000.1114No
76CEACAM5CEA cell adhesion molecule 5 [Source:HGNC Symbol;Acc:HGNC:1817]177860.0000.1029No
77DPYSdihydropyrimidinase [Source:HGNC Symbol;Acc:HGNC:3013]179720.0000.0979No
78CHST8carbohydrate sulfotransferase 8 [Source:HGNC Symbol;Acc:HGNC:15993]179980.0000.0972No
79BFSP2beaded filament structural protein 2 [Source:HGNC Symbol;Acc:HGNC:1041]180880.0000.0948No
80CXCL12C-X-C motif chemokine ligand 12 [Source:HGNC Symbol;Acc:HGNC:10672]187860.0000.0759No
81MOGmyelin oligodendrocyte glycoprotein [Source:HGNC Symbol;Acc:HGNC:7197]188710.0000.0736No
82CXCL6C-X-C motif chemokine ligand 6 [Source:HGNC Symbol;Acc:HGNC:10643]193040.0000.0619No
83CXCL8C-X-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:6025]193090.0000.0618No
84CXCL1C-X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:4602]193180.0000.0616No
85CXCL5C-X-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10642]193210.0000.0616No
86CYP17A1cytochrome P450 family 17 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:2593]196300.0000.0532No
87CHRNA10cholinergic receptor nicotinic alpha 10 subunit [Source:HGNC Symbol;Acc:HGNC:13800]196330.0000.0532No
88PDCphosducin [Source:HGNC Symbol;Acc:HGNC:8759]198040.0000.0486No
89PYYpeptide YY [Source:HGNC Symbol;Acc:HGNC:9748]199980.0000.0433No
90RGRretinal G protein coupled receptor [Source:HGNC Symbol;Acc:HGNC:9990]203740.0000.0332No
91RHDRh blood group D antigen [Source:HGNC Symbol;Acc:HGNC:10009]203820.0000.0330No
92CACNG2calcium voltage-gated channel auxiliary subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:1406]204800.0000.0304No
93MMP17matrix metallopeptidase 17 [Source:HGNC Symbol;Acc:HGNC:7163]207420.0000.0233No
94P2RY11purinergic receptor P2Y11 [Source:HGNC Symbol;Acc:HGNC:8540]211430.0000.0125No
95SLC15A2solute carrier family 15 member 2 [Source:HGNC Symbol;Acc:HGNC:10921]215820.0000.0006No
96INSL3insulin like 3 [Source:HGNC Symbol;Acc:HGNC:6086]216180.000-0.0003No
97INSL4insulin like 4 [Source:HGNC Symbol;Acc:HGNC:6087]216210.000-0.0004No
98KRT31keratin 31 [Source:HGNC Symbol;Acc:HGNC:6448]217160.000-0.0029No
99KRT14keratin 14 [Source:HGNC Symbol;Acc:HGNC:6416]217610.000-0.0041No
100H1-6H1.6 linker histone, cluster member [Source:HGNC Symbol;Acc:HGNC:4720]225320.000-0.0249No
101CTLA4cytotoxic T-lymphocyte associated protein 4 [Source:HGNC Symbol;Acc:HGNC:2505]225460.000-0.0253No
102CD69CD69 molecule [Source:HGNC Symbol;Acc:HGNC:1694]228500.000-0.0335No
103FOXL2forkhead box L2 [Source:HGNC Symbol;Acc:HGNC:1092]232900.000-0.0454No
104CYP2A13cytochrome P450 family 2 subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:2608]233830.000-0.0479No
105EVX1even-skipped homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3506]234260.000-0.0490No
106LALBAlactalbumin alpha [Source:HGNC Symbol;Acc:HGNC:6480]236880.000-0.0561No
107WNT3Wnt family member 3 [Source:HGNC Symbol;Acc:HGNC:12782]248130.000-0.0865No
108SLC4A10solute carrier family 4 member 10 [Source:HGNC Symbol;Acc:HGNC:13811]250960.000-0.0941No
109PRTN3proteinase 3 [Source:HGNC Symbol;Acc:HGNC:9495]252970.000-0.0995No
110RIPK4receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]254160.000-0.1027No
111OR10H3olfactory receptor family 10 subfamily H member 3 [Source:HGNC Symbol;Acc:HGNC:8174]254260.000-0.1030No
112POU2AF1POU class 2 homeobox associating factor 1 [Source:HGNC Symbol;Acc:HGNC:9211]260950.000-0.1211No
113MAGEC2MAGE family member C2 [Source:HGNC Symbol;Acc:HGNC:13574]263540.000-0.1281No
114PF4V1platelet factor 4 variant 1 [Source:HGNC Symbol;Acc:HGNC:8862]267440.000-0.1386No
115XAF1XIAP associated factor 1 [Source:HGNC Symbol;Acc:HGNC:30932]268860.000-0.1424No
116CYP2C8cytochrome P450 family 2 subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:2622]27308-0.036-0.1534No
117ATP12AATPase H+/K+ transporting non-gastric alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:13816]27428-0.052-0.1561No
118DLX6distal-less homeobox 6 [Source:HGNC Symbol;Acc:HGNC:2919]27703-0.082-0.1627No
119TP53tumor protein p53 [Source:HGNC Symbol;Acc:HGNC:11998]27705-0.083-0.1618No
120SARDHsarcosine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:10536]27713-0.084-0.1612No
121PCDH1protocadherin 1 [Source:HGNC Symbol;Acc:HGNC:8655]27790-0.094-0.1623No
122SLC16A4solute carrier family 16 member 4 [Source:HGNC Symbol;Acc:HGNC:10925]27907-0.110-0.1643No
123RFX2regulatory factor X2 [Source:HGNC Symbol;Acc:HGNC:9983]28130-0.137-0.1689No
124ITM2Aintegral membrane protein 2A [Source:HGNC Symbol;Acc:HGNC:6173]28372-0.169-0.1737No
125CD5LCD5 molecule like [Source:HGNC Symbol;Acc:HGNC:1690]29657-0.347-0.2048No
126RORCRAR related orphan receptor C [Source:HGNC Symbol;Acc:HGNC:10260]29707-0.355-0.2025No
127ME3malic enzyme 3 [Source:HGNC Symbol;Acc:HGNC:6985]30656-0.499-0.2230No
128BAXBCL2 associated X, apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:959]31656-0.681-0.2431No
129NF1neurofibromin 1 [Source:HGNC Symbol;Acc:HGNC:7765]31797-0.714-0.2395No
130CNOT9CCR4-NOT transcription complex subunit 9 [Source:HGNC Symbol;Acc:HGNC:10445]32144-0.796-0.2407No
131FZD9frizzled class receptor 9 [Source:HGNC Symbol;Acc:HGNC:4047]32597-0.904-0.2436No
132PIDD1p53-induced death domain protein 1 [Source:HGNC Symbol;Acc:HGNC:16491]32826-0.969-0.2398No
133INPP5Dinositol polyphosphate-5-phosphatase D [Source:HGNC Symbol;Acc:HGNC:6079]33126-1.054-0.2370No
134SLASrc like adaptor [Source:HGNC Symbol;Acc:HGNC:10902]33174-1.067-0.2273No
135OSGIN1oxidative stress induced growth inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:30093]33265-1.097-0.2184No
136TDRKHtudor and KH domain containing [Source:HGNC Symbol;Acc:HGNC:11713]33495-1.169-0.2126No
137NFIXnuclear factor I X [Source:HGNC Symbol;Acc:HGNC:7788]33872-1.294-0.2094No
138POU6F1POU class 6 homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9224]34033-1.354-0.1998No
139ANGPTL4angiopoietin like 4 [Source:HGNC Symbol;Acc:HGNC:16039]34375-1.491-0.1937No
140CD68CD68 molecule [Source:HGNC Symbol;Acc:HGNC:1693]34786-1.664-0.1876No
141EML3EMAP like 3 [Source:HGNC Symbol;Acc:HGNC:26666]36011-2.510-0.1949No
142DPF1double PHD fingers 1 [Source:HGNC Symbol;Acc:HGNC:20225]36074-2.573-0.1701No
143RND2Rho family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:18315]36330-2.863-0.1475No
144ETV5ETS variant transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:3494]36433-2.964-0.1197No
145GALK1galactokinase 1 [Source:HGNC Symbol;Acc:HGNC:4118]36447-2.976-0.0894No
146H6PDhexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4795]36577-3.130-0.0606No
147ALOX5AParachidonate 5-lipoxygenase activating protein [Source:HGNC Symbol;Acc:HGNC:436]36804-3.543-0.0302No
148TFAP4transcription factor AP-4 [Source:HGNC Symbol;Acc:HGNC:11745]36872-3.6820.0059No
Table: GSEA details [plain text format]



Fig 2: P53_DN.V2_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: P53_DN.V2_UP: Random ES distribution   
Gene set null distribution of ES for P53_DN.V2_UP