Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_LPS_versus_WT_NA.greenbergcls.cls
#WT_LPS_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_LPS
GeneSetWNT_UP.V1_DN
Enrichment Score (ES)0.43853977
Normalized Enrichment Score (NES)1.2024459
Nominal p-value0.036363635
FDR q-value0.15839751
FWER p-Value0.621
Table: GSEA Results Summary



Fig 1: Enrichment plot: WNT_UP.V1_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PTGS2prostaglandin-endoperoxide synthase 2 [Source:HGNC Symbol;Acc:HGNC:9605]74.9520.0325Yes
2GBP4guanylate binding protein 4 [Source:HGNC Symbol;Acc:HGNC:20480]144.9090.0647Yes
3CMPK2cytidine/uridine monophosphate kinase 2 [Source:HGNC Symbol;Acc:HGNC:27015]244.8130.0962Yes
4USP18ubiquitin specific peptidase 18 [Source:HGNC Symbol;Acc:HGNC:12616]464.6250.1262Yes
5IFIH1interferon induced with helicase C domain 1 [Source:HGNC Symbol;Acc:HGNC:18873]534.5250.1558Yes
6IRF7interferon regulatory factor 7 [Source:HGNC Symbol;Acc:HGNC:6122]564.5070.1855Yes
7OAS12'-5'-oligoadenylate synthetase 1 [Source:HGNC Symbol;Acc:HGNC:8086]1343.8870.2091Yes
8LGALS3BPgalectin 3 binding protein [Source:HGNC Symbol;Acc:HGNC:6564]1983.4950.2304Yes
9CD44CD44 molecule (Indian blood group) [Source:HGNC Symbol;Acc:HGNC:1681]2323.3040.2513Yes
10ABCA1ATP binding cassette subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:29]2343.2850.2730Yes
11CLEC4DC-type lectin domain family 4 member D [Source:HGNC Symbol;Acc:HGNC:14554]2363.2820.2946Yes
12PCDH7protocadherin 7 [Source:HGNC Symbol;Acc:HGNC:8659]2653.1560.3147Yes
13ISG15ISG15 ubiquitin like modifier [Source:HGNC Symbol;Acc:HGNC:4053]2853.0800.3345Yes
14PIM2Pim-2 proto-oncogene, serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:8987]3102.9610.3534Yes
15KCND1potassium voltage-gated channel subfamily D member 1 [Source:HGNC Symbol;Acc:HGNC:6237]3172.9370.3726Yes
16ADARadenosine deaminase RNA specific [Source:HGNC Symbol;Acc:HGNC:225]3362.8350.3908Yes
17EIF2AK2eukaryotic translation initiation factor 2 alpha kinase 2 [Source:HGNC Symbol;Acc:HGNC:9437]5202.3050.4010Yes
18IRF9interferon regulatory factor 9 [Source:HGNC Symbol;Acc:HGNC:6131]5242.3040.4162Yes
19CLN3CLN3 lysosomal/endosomal transmembrane protein, battenin [Source:HGNC Symbol;Acc:HGNC:2074]8851.6820.4175Yes
20TLR6toll like receptor 6 [Source:HGNC Symbol;Acc:HGNC:16711]9341.6240.4269Yes
21HLA-Amajor histocompatibility complex, class I, A [Source:HGNC Symbol;Acc:HGNC:4931]10071.5430.4352Yes
22PIGNphosphatidylinositol glycan anchor biosynthesis class N [Source:HGNC Symbol;Acc:HGNC:8967]13581.2740.4341Yes
23TUSC2tumor suppressor 2, mitochondrial calcium regulator [Source:HGNC Symbol;Acc:HGNC:17034]14891.1810.4384Yes
24ADCY4adenylate cyclase 4 [Source:HGNC Symbol;Acc:HGNC:235]17361.0380.4385Yes
25DNASE1L3deoxyribonuclease 1 like 3 [Source:HGNC Symbol;Acc:HGNC:2959]22010.8380.4315No
26CELF1CUGBP Elav-like family member 1 [Source:HGNC Symbol;Acc:HGNC:2549]26340.6870.4243No
27MAK16MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]28450.6240.4228No
28CDO1cysteine dioxygenase type 1 [Source:HGNC Symbol;Acc:HGNC:1795]29430.5920.4240No
29DNAJC11DnaJ heat shock protein family (Hsp40) member C11 [Source:HGNC Symbol;Acc:HGNC:25570]29530.5900.4277No
30SH2D2ASH2 domain containing 2A [Source:HGNC Symbol;Acc:HGNC:10821]31360.5510.4264No
31PHOSPHO2phosphatase, orphan 2 [Source:HGNC Symbol;Acc:HGNC:28316]31750.5400.4289No
32TNFRSF8TNF receptor superfamily member 8 [Source:HGNC Symbol;Acc:HGNC:11923]34010.4820.4260No
33MAP3K2mitogen-activated protein kinase kinase kinase 2 [Source:HGNC Symbol;Acc:HGNC:6854]35710.4460.4244No
34PTPN22protein tyrosine phosphatase non-receptor type 22 [Source:HGNC Symbol;Acc:HGNC:9652]38600.3890.4192No
35VEGFAvascular endothelial growth factor A [Source:HGNC Symbol;Acc:HGNC:12680]39150.3760.4202No
36GPATCH2G-patch domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25499]42360.3140.4136No
37PRH1proline rich protein HaeIII subfamily 1 [Source:HGNC Symbol;Acc:HGNC:9366]43890.2890.4114No
38NGEFneuronal guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:7807]44340.2810.4120No
39NSMFNMDA receptor synaptonuclear signaling and neuronal migration factor [Source:HGNC Symbol;Acc:HGNC:29843]45010.2680.4120No
40VPREB1V-set pre-B cell surrogate light chain 1 [Source:HGNC Symbol;Acc:HGNC:12709]45480.2600.4125No
41KDM5Alysine demethylase 5A [Source:HGNC Symbol;Acc:HGNC:9886]49600.1970.4026No
42DIO2iodothyronine deiodinase 2 [Source:HGNC Symbol;Acc:HGNC:2884]51620.1670.3983No
43CEACAM1CEA cell adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:1814]51780.1650.3990No
44F10coagulation factor X [Source:HGNC Symbol;Acc:HGNC:3528]54220.1300.3933No
45RASD1ras related dexamethasone induced 1 [Source:HGNC Symbol;Acc:HGNC:15828]54370.1290.3937No
46CD5CD5 molecule [Source:HGNC Symbol;Acc:HGNC:1685]54930.1210.3931No
47GFAPglial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]56080.1090.3907No
48CSF2RBcolony stimulating factor 2 receptor subunit beta [Source:HGNC Symbol;Acc:HGNC:2436]56280.1060.3909No
49MMP3matrix metallopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:7173]57310.0920.3887No
50CCDC130coiled-coil domain containing 130 [Source:HGNC Symbol;Acc:HGNC:28118]57940.0840.3876No
51METMET proto-oncogene, receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:7029]60620.0440.3806No
52TAL2TAL bHLH transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11557]61430.0320.3787No
53CYTH1cytohesin 1 [Source:HGNC Symbol;Acc:HGNC:9501]62580.0150.3757No
54KRTAP3-1keratin associated protein 3-1 [Source:HGNC Symbol;Acc:HGNC:16778]64650.0000.3701No
55APC2APC regulator of WNT signaling pathway 2 [Source:HGNC Symbol;Acc:HGNC:24036]66860.0000.3642No
56HES3hes family bHLH transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:26226]72070.0000.3501No
57ADAM2ADAM metallopeptidase domain 2 [Source:HGNC Symbol;Acc:HGNC:198]88550.0000.3055No
58TNFRSF21TNF receptor superfamily member 21 [Source:HGNC Symbol;Acc:HGNC:13469]92050.0000.2960No
59C16orf89chromosome 16 open reading frame 89 [Source:HGNC Symbol;Acc:HGNC:28687]92250.0000.2955No
60CNTN1contactin 1 [Source:HGNC Symbol;Acc:HGNC:2171]93660.0000.2917No
61GPX3glutathione peroxidase 3 [Source:HGNC Symbol;Acc:HGNC:4555]94970.0000.2882No
62KCNA2potassium voltage-gated channel subfamily A member 2 [Source:HGNC Symbol;Acc:HGNC:6220]97140.0000.2823No
63KCNA4potassium voltage-gated channel subfamily A member 4 [Source:HGNC Symbol;Acc:HGNC:6222]97180.0000.2823No
64ADAM19ADAM metallopeptidase domain 19 [Source:HGNC Symbol;Acc:HGNC:197]99270.0000.2766No
65ADAM12ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]99290.0000.2766No
66GRM8glutamate metabotropic receptor 8 [Source:HGNC Symbol;Acc:HGNC:4600]99650.0000.2756No
67SPRR2Bsmall proline rich protein 2B [Source:HGNC Symbol;Acc:HGNC:11262]101800.0000.2699No
68GSTA4glutathione S-transferase alpha 4 [Source:HGNC Symbol;Acc:HGNC:4629]102270.0000.2686No
69GRIN2Cglutamate ionotropic receptor NMDA type subunit 2C [Source:HGNC Symbol;Acc:HGNC:4587]103300.0000.2658No
70AARDalanine and arginine rich domain containing protein [Source:HGNC Symbol;Acc:HGNC:33842]104260.0000.2633No
71TBXA2Rthromboxane A2 receptor [Source:HGNC Symbol;Acc:HGNC:11608]106510.0000.2572No
72ACKR1atypical chemokine receptor 1 (Duffy blood group) [Source:HGNC Symbol;Acc:HGNC:4035]110660.0000.2460No
73PLA2G10phospholipase A2 group X [Source:HGNC Symbol;Acc:HGNC:9029]115420.0000.2331No
74PLA2G1Bphospholipase A2 group IB [Source:HGNC Symbol;Acc:HGNC:9030]115950.0000.2317No
75IGFBP6insulin like growth factor binding protein 6 [Source:HGNC Symbol;Acc:HGNC:5475]117420.0000.2278No
76RAI2retinoic acid induced 2 [Source:HGNC Symbol;Acc:HGNC:9835]125220.0000.2067No
77HAND1heart and neural crest derivatives expressed 1 [Source:HGNC Symbol;Acc:HGNC:4807]136290.0000.1767No
78MYOGmyogenin [Source:HGNC Symbol;Acc:HGNC:7612]143500.0000.1572No
79PCP2Purkinje cell protein 2 [Source:HGNC Symbol;Acc:HGNC:30209]153380.0000.1305No
80SYNGR4synaptogyrin 4 [Source:HGNC Symbol;Acc:HGNC:11502]153670.0000.1297No
81BIKBCL2 interacting killer [Source:HGNC Symbol;Acc:HGNC:1051]155470.0000.1249No
82G0S2G0/G1 switch 2 [Source:HGNC Symbol;Acc:HGNC:30229]157930.0000.1182No
83CFHR1complement factor H related 1 [Source:HGNC Symbol;Acc:HGNC:4888]168680.0000.0891No
84PPP1R1Aprotein phosphatase 1 regulatory inhibitor subunit 1A [Source:HGNC Symbol;Acc:HGNC:9286]175420.0000.0709No
85ADRB1adrenoceptor beta 1 [Source:HGNC Symbol;Acc:HGNC:285]178250.0000.0633No
86HLA-DRB1major histocompatibility complex, class II, DR beta 1 [Source:HGNC Symbol;Acc:HGNC:4948]179700.0000.0594No
87LBPlipopolysaccharide binding protein [Source:HGNC Symbol;Acc:HGNC:6517]183760.0000.0484No
88LHBluteinizing hormone subunit beta [Source:HGNC Symbol;Acc:HGNC:6584]184650.0000.0460No
89COL9A1collagen type IX alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2217]188480.0000.0357No
90NGFnerve growth factor [Source:HGNC Symbol;Acc:HGNC:7808]191400.0000.0278No
91IL12RB1interleukin 12 receptor subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:5971]194800.0000.0186No
92RAMP3receptor activity modifying protein 3 [Source:HGNC Symbol;Acc:HGNC:9845]201730.000-0.0001No
93MRAPmelanocortin 2 receptor accessory protein [Source:HGNC Symbol;Acc:HGNC:1304]203560.000-0.0051No
94TFR2transferrin receptor 2 [Source:HGNC Symbol;Acc:HGNC:11762]206880.000-0.0140No
95TSHBthyroid stimulating hormone subunit beta [Source:HGNC Symbol;Acc:HGNC:12372]218140.000-0.0445No
96GGNBP1gametogenetin binding protein 1 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:19427]220170.000-0.0500No
97CD48CD48 molecule [Source:HGNC Symbol;Acc:HGNC:1683]227950.000-0.0710No
98MEP1Ameprin A subunit alpha [Source:HGNC Symbol;Acc:HGNC:7015]229760.000-0.0759No
99CORTcortistatin [Source:HGNC Symbol;Acc:HGNC:2257]231000.000-0.0792No
100AIREautoimmune regulator [Source:HGNC Symbol;Acc:HGNC:360]231310.000-0.0800No
101LAMA1laminin subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:6481]234550.000-0.0888No
102CD79BCD79b molecule [Source:HGNC Symbol;Acc:HGNC:1699]251920.000-0.1358No
103OCLNoccludin [Source:HGNC Symbol;Acc:HGNC:8104]258050.000-0.1524No
104CASQ2calsequestrin 2 [Source:HGNC Symbol;Acc:HGNC:1513]264290.000-0.1692No
105SLC1A6solute carrier family 1 member 6 [Source:HGNC Symbol;Acc:HGNC:10944]266750.000-0.1759No
106AGTangiotensinogen [Source:HGNC Symbol;Acc:HGNC:333]267810.000-0.1787No
107HDGFL1HDGF like 1 [Source:HGNC Symbol;Acc:HGNC:21095]270710.000-0.1865No
108TGFBR3transforming growth factor beta receptor 3 [Source:HGNC Symbol;Acc:HGNC:11774]270990.000-0.1873No
109NEO1neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]27349-0.041-0.1937No
110THBDthrombomodulin [Source:HGNC Symbol;Acc:HGNC:11784]27398-0.047-0.1947No
111LSRlipolysis stimulated lipoprotein receptor [Source:HGNC Symbol;Acc:HGNC:29572]27427-0.052-0.1951No
112LHX1LIM homeobox 1 [Source:HGNC Symbol;Acc:HGNC:6593]27461-0.056-0.1957No
113SLC22A18solute carrier family 22 member 18 [Source:HGNC Symbol;Acc:HGNC:10964]27622-0.073-0.1995No
114GABRG2gamma-aminobutyric acid type A receptor subunit gamma2 [Source:HGNC Symbol;Acc:HGNC:4087]27646-0.074-0.1997No
115PLXNA1plexin A1 [Source:HGNC Symbol;Acc:HGNC:9099]27736-0.086-0.2015No
116UBR1ubiquitin protein ligase E3 component n-recognin 1 [Source:HGNC Symbol;Acc:HGNC:16808]27865-0.105-0.2043No
117EFNB2ephrin B2 [Source:HGNC Symbol;Acc:HGNC:3227]27915-0.112-0.2049No
118HLA-DMBmajor histocompatibility complex, class II, DM beta [Source:HGNC Symbol;Acc:HGNC:4935]27921-0.112-0.2043No
119STC1stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373]28065-0.129-0.2073No
120CPN1carboxypeptidase N subunit 1 [Source:HGNC Symbol;Acc:HGNC:2312]28262-0.153-0.2116No
121DDX46DEAD-box helicase 46 [Source:HGNC Symbol;Acc:HGNC:18681]28273-0.155-0.2108No
122DDX25DEAD-box helicase 25 [Source:HGNC Symbol;Acc:HGNC:18698]28520-0.188-0.2163No
123AKR1E2aldo-keto reductase family 1 member E2 [Source:HGNC Symbol;Acc:HGNC:23437]28584-0.197-0.2167No
124TSPAN5tetraspanin 5 [Source:HGNC Symbol;Acc:HGNC:17753]29116-0.270-0.2293No
125FOXN3forkhead box N3 [Source:HGNC Symbol;Acc:HGNC:1928]29167-0.278-0.2288No
126SINHCAFSIN3-HDAC complex associated factor [Source:HGNC Symbol;Acc:HGNC:30702]29260-0.289-0.2294No
127HEY1hes related family bHLH transcription factor with YRPW motif 1 [Source:HGNC Symbol;Acc:HGNC:4880]29326-0.299-0.2292No
128DNAJC4DnaJ heat shock protein family (Hsp40) member C4 [Source:HGNC Symbol;Acc:HGNC:5271]29352-0.304-0.2278No
129SDSLserine dehydratase like [Source:HGNC Symbol;Acc:HGNC:30404]29356-0.305-0.2259No
130CMBLcarboxymethylenebutenolidase homolog [Source:HGNC Symbol;Acc:HGNC:25090]29372-0.309-0.2243No
131MAPK7mitogen-activated protein kinase 7 [Source:HGNC Symbol;Acc:HGNC:6880]29756-0.360-0.2323No
132CYBAcytochrome b-245 alpha chain [Source:HGNC Symbol;Acc:HGNC:2577]29776-0.364-0.2304No
133TRAPPC5trafficking protein particle complex 5 [Source:HGNC Symbol;Acc:HGNC:23067]30187-0.426-0.2387No
134CD93CD93 molecule [Source:HGNC Symbol;Acc:HGNC:15855]30638-0.497-0.2476No
135STK11IPserine/threonine kinase 11 interacting protein [Source:HGNC Symbol;Acc:HGNC:19184]30951-0.549-0.2524No
136KITLGKIT ligand [Source:HGNC Symbol;Acc:HGNC:6343]31378-0.622-0.2598No
137RSPH1radial spoke head component 1 [Source:HGNC Symbol;Acc:HGNC:12371]31459-0.639-0.2578No
138ASH2LASH2 like, histone lysine methyltransferase complex subunit [Source:HGNC Symbol;Acc:HGNC:744]31512-0.649-0.2549No
139PCDHA10protocadherin alpha 10 [Source:HGNC Symbol;Acc:HGNC:8664]31801-0.714-0.2580No
140KCNA3potassium voltage-gated channel subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:6221]31847-0.726-0.2544No
141ACVR1Bactivin A receptor type 1B [Source:HGNC Symbol;Acc:HGNC:172]32155-0.799-0.2575No
142ETV4ETS variant transcription factor 4 [Source:HGNC Symbol;Acc:HGNC:3493]32529-0.886-0.2617No
143HOXB5homeobox B5 [Source:HGNC Symbol;Acc:HGNC:5116]32630-0.911-0.2584No
144NAGKN-acetylglucosamine kinase [Source:HGNC Symbol;Acc:HGNC:17174]33335-1.119-0.2701No
145VWA7von Willebrand factor A domain containing 7 [Source:HGNC Symbol;Acc:HGNC:13939]33402-1.138-0.2644No
146FAAHfatty acid amide hydrolase [Source:HGNC Symbol;Acc:HGNC:3553]33559-1.190-0.2608No
147FBXO8F-box protein 8 [Source:HGNC Symbol;Acc:HGNC:13587]34031-1.352-0.2646No
148ATP7BATPase copper transporting beta [Source:HGNC Symbol;Acc:HGNC:870]34386-1.495-0.2643No
149SYT8synaptotagmin 8 [Source:HGNC Symbol;Acc:HGNC:19264]34566-1.569-0.2588No
150NMT2N-myristoyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:7858]34622-1.592-0.2498No
151HDHD5haloacid dehalogenase like hydrolase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:1843]34633-1.597-0.2395No
152VIMvimentin [Source:HGNC Symbol;Acc:HGNC:12692]34900-1.716-0.2354No
153DPF3double PHD fingers 3 [Source:HGNC Symbol;Acc:HGNC:17427]34923-1.731-0.2246No
154PXMP2peroxisomal membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:9716]34960-1.751-0.2140No
155SERGEFsecretion regulating guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:17499]35316-1.956-0.2107No
156BPGMbisphosphoglycerate mutase [Source:HGNC Symbol;Acc:HGNC:1093]35428-2.032-0.2003No
157ABCC3ATP binding cassette subfamily C member 3 [Source:HGNC Symbol;Acc:HGNC:54]35634-2.187-0.1915No
158TGFBR1transforming growth factor beta receptor 1 [Source:HGNC Symbol;Acc:HGNC:11772]35794-2.310-0.1805No
159NFATC2nuclear factor of activated T cells 2 [Source:HGNC Symbol;Acc:HGNC:7776]35836-2.347-0.1662No
160TNNI3troponin I3, cardiac type [Source:HGNC Symbol;Acc:HGNC:11947]35852-2.362-0.1510No
161NCOA2nuclear receptor coactivator 2 [Source:HGNC Symbol;Acc:HGNC:7669]35889-2.403-0.1361No
162SYT11synaptotagmin 11 [Source:HGNC Symbol;Acc:HGNC:19239]35947-2.454-0.1215No
163OLFM1olfactomedin 1 [Source:HGNC Symbol;Acc:HGNC:17187]35985-2.488-0.1060No
164HSD3B7hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 [Source:HGNC Symbol;Acc:HGNC:18324]36463-2.987-0.0993No
165TANC1tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 [Source:HGNC Symbol;Acc:HGNC:29364]36530-3.071-0.0808No
166NT5DC25'-nucleotidase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25717]36684-3.306-0.0631No
167ST6GALNAC6ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:23364]36735-3.405-0.0420No
168ST3GAL2ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:10863]36796-3.527-0.0204No
169FZD7frizzled class receptor 7 [Source:HGNC Symbol;Acc:HGNC:4045]37029-4.2890.0017No
Table: GSEA details [plain text format]



Fig 2: WNT_UP.V1_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: WNT_UP.V1_DN: Random ES distribution   
Gene set null distribution of ES for WNT_UP.V1_DN