Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_LPS_versus_WT_NA.greenbergcls.cls
#WT_LPS_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetDESCARTES_MAIN_FETAL_BIPOLAR_CELLS
Enrichment Score (ES)-0.7807662
Normalized Enrichment Score (NES)-1.586516
Nominal p-value0.0
FDR q-value0.0015817278
FWER p-Value0.032
Table: GSEA Results Summary



Fig 1: Enrichment plot: DESCARTES_MAIN_FETAL_BIPOLAR_CELLS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1KCTD6potassium channel tetramerization domain containing 6 [Source:HGNC Symbol;Acc:HGNC:22235]45320.263-0.1107No
2HSPA8P11heat shock protein family A (Hsp70) member 8 pseudogene 11 [Source:HGNC Symbol;Acc:HGNC:44926]51030.177-0.1182No
3PRICKLE2prickle planar cell polarity protein 2 [Source:HGNC Symbol;Acc:HGNC:20340]68900.000-0.1665No
4LINC01291long intergenic non-protein coding RNA 1291 [Source:HGNC Symbol;Acc:HGNC:50358]71310.000-0.1730No
5C15orf32chromosome 15 putative open reading frame 32 [Source:HGNC Symbol;Acc:HGNC:26549]72150.000-0.1752No
6LACTBL1lactamase beta like 1 [Source:HGNC Symbol;Acc:HGNC:35445]74130.000-0.1805No
7ARSHarylsulfatase family member H [Source:HGNC Symbol;Acc:HGNC:32488]74650.000-0.1819No
8ASIC4acid sensing ion channel subunit family member 4 [Source:HGNC Symbol;Acc:HGNC:21263]79140.000-0.1940No
9WASF3-AS1WASF3 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:39841]82890.000-0.2041No
10TDRD6tudor domain containing 6 [Source:HGNC Symbol;Acc:HGNC:21339]90610.000-0.2249No
11NRG1-IT3NRG1 intronic transcript 3 [Source:HGNC Symbol;Acc:HGNC:43635]90920.000-0.2257No
12NRG1-IT1NRG1 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:43633]90990.000-0.2259No
13CACNA2D4calcium voltage-gated channel auxiliary subunit alpha2delta 4 [Source:HGNC Symbol;Acc:HGNC:20202]91150.000-0.2263No
14GRIK1glutamate ionotropic receptor kainate type subunit 1 [Source:HGNC Symbol;Acc:HGNC:4579]92850.000-0.2309No
15GUSBP4GUSB pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:18220]93810.000-0.2334No
16NFIBnuclear factor I B [Source:HGNC Symbol;Acc:HGNC:7785]100860.000-0.2525No
17GRIK1-AS1GRIK1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:16458]104590.000-0.2625No
18SERTM1serine rich and transmembrane domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33792]106350.000-0.2673No
19ELSPBP1epididymal sperm binding protein 1 [Source:HGNC Symbol;Acc:HGNC:14417]106770.000-0.2684No
20ACKR1atypical chemokine receptor 1 (Duffy blood group) [Source:HGNC Symbol;Acc:HGNC:4035]110660.000-0.2788No
21AC023136.1novel transcript111090.000-0.2800No
22NYAP2neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 [Source:HGNC Symbol;Acc:HGNC:29291]113190.000-0.2856No
23AP001150.1novel transcript, antisense to POU2F3120710.000-0.3059No
24MACROD2-IT1MACROD2 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:16201]128430.000-0.3268No
25GS1-279B7.1microtubule associated protein 1 light chain 3 beta pseudogene [Source:NCBI gene (formerly Entrezgene);Acc:100288079]128880.000-0.3279No
26GLRA1glycine receptor alpha 1 [Source:HGNC Symbol;Acc:HGNC:4326]129020.000-0.3283No
27TMEM196transmembrane protein 196 [Source:HGNC Symbol;Acc:HGNC:22431]131590.000-0.3352No
28TRMT9BtRNA methyltransferase 9B (putative) [Source:HGNC Symbol;Acc:HGNC:26725]132520.000-0.3377No
29LINC02224long intergenic non-protein coding RNA 2224 [Source:HGNC Symbol;Acc:HGNC:53093]137430.000-0.3509No
30TMEM215transmembrane protein 215 [Source:HGNC Symbol;Acc:HGNC:33816]138680.000-0.3543No
31ZNF804Bzinc finger protein 804B [Source:HGNC Symbol;Acc:HGNC:21958]138860.000-0.3547No
32TAFA4TAFA chemokine like family member 4 [Source:HGNC Symbol;Acc:HGNC:21591]140650.000-0.3596No
33VSX1visual system homeobox 1 [Source:HGNC Symbol;Acc:HGNC:12723]145690.000-0.3731No
34VSX2visual system homeobox 2 [Source:HGNC Symbol;Acc:HGNC:1975]145710.000-0.3732No
35SV2Bsynaptic vesicle glycoprotein 2B [Source:HGNC Symbol;Acc:HGNC:16874]157180.000-0.4041No
36RSF1-IT2RSF1 intronic transcript 2 [Source:HGNC Symbol;Acc:HGNC:41438]159200.000-0.4096No
37KRT8P15keratin 8 pseudogene 15 [Source:HGNC Symbol;Acc:HGNC:33367]163530.000-0.4212No
38FEZF2FEZ family zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:13506]185180.000-0.4797No
39CDH20cadherin 20 [Source:HGNC Symbol;Acc:HGNC:1760]185610.000-0.4808No
40LINC01896long intergenic non-protein coding RNA 1896 [Source:HGNC Symbol;Acc:HGNC:52715]195570.000-0.5077No
41AC005746.2novel transcript, antisense to BCAS3195900.000-0.5086No
42LINC01750long intergenic non-protein coding RNA 1750 [Source:HGNC Symbol;Acc:HGNC:52538]197140.000-0.5119No
43GABRB3gamma-aminobutyric acid type A receptor subunit beta3 [Source:HGNC Symbol;Acc:HGNC:4083]197780.000-0.5136No
44TRPC7transient receptor potential cation channel subfamily C member 7 [Source:HGNC Symbol;Acc:HGNC:20754]198920.000-0.5167No
45GABRR3gamma-aminobutyric acid type A receptor subunit rho3 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:17969]199590.000-0.5185No
46GABRR1gamma-aminobutyric acid type A receptor subunit rho1 [Source:HGNC Symbol;Acc:HGNC:4090]199610.000-0.5185No
47LINC01933long intergenic non-protein coding RNA 1933 [Source:HGNC Symbol;Acc:HGNC:52756]203720.000-0.5296No
48RN7SL83PRNA, 7SL, cytoplasmic 83, pseudogene [Source:HGNC Symbol;Acc:HGNC:46099]204900.000-0.5327No
49TRPC7-AS2TRPC7 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:40937]211260.000-0.5499No
50MACROD2-AS1MACROD2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:37193]212890.000-0.5543No
51ZNF385Bzinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]214240.000-0.5579No
52CA10carbonic anhydrase 10 [Source:HGNC Symbol;Acc:HGNC:1369]217450.000-0.5665No
53TMEM132Etransmembrane protein 132E [Source:HGNC Symbol;Acc:HGNC:26991]222920.000-0.5813No
54MIR3671microRNA 3671 [Source:HGNC Symbol;Acc:HGNC:38925]223630.000-0.5832No
55DSCAM-IT1DSCAM intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41327]224140.000-0.5845No
56ZNF223zinc finger protein 223 [Source:HGNC Symbol;Acc:HGNC:13016]225690.000-0.5887No
57LHX4LIM homeobox 4 [Source:HGNC Symbol;Acc:HGNC:21734]229510.000-0.5990No
58RNU6-116PRNA, U6 small nuclear 116, pseudogene [Source:HGNC Symbol;Acc:HGNC:47079]234980.000-0.6137No
59NRG1neuregulin 1 [Source:HGNC Symbol;Acc:HGNC:7997]238900.000-0.6243No
60NCKAP5NCK associated protein 5 [Source:HGNC Symbol;Acc:HGNC:29847]241530.000-0.6314No
61LINC00469long intergenic non-protein coding RNA 469 [Source:HGNC Symbol;Acc:HGNC:26863]243470.000-0.6366No
62CABP2calcium binding protein 2 [Source:HGNC Symbol;Acc:HGNC:1385]244880.000-0.6404No
63RN7SL754PRNA, 7SL, cytoplasmic 754, pseudogene [Source:HGNC Symbol;Acc:HGNC:46770]255480.000-0.6690No
64AC004835.1novel transcript265230.000-0.6953No
65BSPH1binder of sperm protein homolog 1 [Source:HGNC Symbol;Acc:HGNC:33906]267330.000-0.7010No
66MAP7microtubule associated protein 7 [Source:HGNC Symbol;Acc:HGNC:6869]270030.000-0.7082No
67DSCAMDS cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:3039]270670.000-0.7099No
68CYP2C8cytochrome P450 family 2 subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:2622]27308-0.036-0.7148No
69FSTL5follistatin like 5 [Source:HGNC Symbol;Acc:HGNC:21386]29487-0.323-0.7592Yes
70GNL2P1G protein nucleolar 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:50779]29492-0.323-0.7449Yes
71CADPScalcium dependent secretion activator [Source:HGNC Symbol;Acc:HGNC:1426]30194-0.427-0.7447Yes
72ZPBPzona pellucida binding protein [Source:HGNC Symbol;Acc:HGNC:15662]31396-0.626-0.7492Yes
73CRYBG3crystallin beta-gamma domain containing 3 [Source:HGNC Symbol;Acc:HGNC:34427]32566-0.896-0.7407Yes
74AIMP1P1aminoacyl tRNA synthetase complex interacting multifunctional protein 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16543]32585-0.900-0.7010Yes
75B3GLCTbeta 3-glucosyltransferase [Source:HGNC Symbol;Acc:HGNC:20207]33479-1.163-0.6732Yes
76GSG1germ cell associated 1 [Source:HGNC Symbol;Acc:HGNC:19716]33532-1.180-0.6218Yes
77LRRC1leucine rich repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:14307]35531-2.099-0.5820Yes
78MACROD2mono-ADP ribosylhydrolase 2 [Source:HGNC Symbol;Acc:HGNC:16126]35680-2.219-0.4868Yes
79C3orf70chromosome 3 open reading frame 70 [Source:HGNC Symbol;Acc:HGNC:33731]36034-2.530-0.3833Yes
80AGAP1ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 [Source:HGNC Symbol;Acc:HGNC:16922]36298-2.816-0.2646Yes
81FAM234Bfamily with sequence similarity 234 member B [Source:HGNC Symbol;Acc:HGNC:29288]36460-2.986-0.1355Yes
82HCN2hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 [Source:HGNC Symbol;Acc:HGNC:4846]36738-3.4120.0095Yes
Table: GSEA details [plain text format]



Fig 2: DESCARTES_MAIN_FETAL_BIPOLAR_CELLS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: DESCARTES_MAIN_FETAL_BIPOLAR_CELLS: Random ES distribution   
Gene set null distribution of ES for DESCARTES_MAIN_FETAL_BIPOLAR_CELLS