Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_LPS_versus_WT_NA.greenbergcls.cls
#WT_LPS_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_LPS
GeneSetTRAVAGLINI_LUNG_MUCOUS_CELL
Enrichment Score (ES)0.6302071
Normalized Enrichment Score (NES)1.6600217
Nominal p-value0.0
FDR q-value0.06399283
FWER p-Value0.175
Table: GSEA Results Summary



Fig 1: Enrichment plot: TRAVAGLINI_LUNG_MUCOUS_CELL   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]14.9750.0478Yes
2CSF3colony stimulating factor 3 [Source:HGNC Symbol;Acc:HGNC:2438]134.9200.0949Yes
3DUSP5dual specificity phosphatase 5 [Source:HGNC Symbol;Acc:HGNC:3071]164.9040.1420Yes
4CXCL10C-X-C motif chemokine ligand 10 [Source:HGNC Symbol;Acc:HGNC:10637]484.5920.1853Yes
5CPDcarboxypeptidase D [Source:HGNC Symbol;Acc:HGNC:2301]874.1770.2245Yes
6ASS1argininosuccinate synthase 1 [Source:HGNC Symbol;Acc:HGNC:758]914.1530.2644Yes
7PLK2polo like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19699]1473.8060.2995Yes
8CFBcomplement factor B [Source:HGNC Symbol;Acc:HGNC:1037]1823.5900.3331Yes
9SOD2superoxide dismutase 2 [Source:HGNC Symbol;Acc:HGNC:11180]2213.3630.3644Yes
10SAA1serum amyloid A1 [Source:HGNC Symbol;Acc:HGNC:10513]2593.2090.3943Yes
11LYNLYN proto-oncogene, Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:6735]3412.8160.4192Yes
12TNFAIP2TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895]4192.5540.4417Yes
13SAA2serum amyloid A2 [Source:HGNC Symbol;Acc:HGNC:10514]4302.5230.4657Yes
14C15orf48chromosome 15 open reading frame 48 [Source:HGNC Symbol;Acc:HGNC:29898]5372.2730.4847Yes
15TIMP1TIMP metallopeptidase inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:11820]7221.9440.4984Yes
16IL6interleukin 6 [Source:HGNC Symbol;Acc:HGNC:6018]7321.9300.5167Yes
17CTSCcathepsin C [Source:HGNC Symbol;Acc:HGNC:2528]8721.6940.5293Yes
18PDZK1IP1PDZK1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16887]8741.6930.5455Yes
19SAT1spermidine/spermine N1-acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10540]9491.6120.5590Yes
20TNIP3TNFAIP3 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:19315]9841.5780.5733Yes
21CLUclusterin [Source:HGNC Symbol;Acc:HGNC:2095]11561.4330.5824Yes
22PTGESprostaglandin E synthase [Source:HGNC Symbol;Acc:HGNC:9599]12261.3710.5938Yes
23TGM2transglutaminase 2 [Source:HGNC Symbol;Acc:HGNC:11778]14241.2280.6002Yes
24REEP3receptor accessory protein 3 [Source:HGNC Symbol;Acc:HGNC:23711]14571.2040.6110Yes
25ST3GAL1ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10862]17351.0390.6135Yes
26SERPINA3serpin family A member 3 [Source:HGNC Symbol;Acc:HGNC:16]18001.0110.6215Yes
27C3complement C3 [Source:HGNC Symbol;Acc:HGNC:1318]20580.8920.6231Yes
28MED24mediator complex subunit 24 [Source:HGNC Symbol;Acc:HGNC:22963]21070.8750.6302Yes
29IFITM1interferon induced transmembrane protein 1 [Source:HGNC Symbol;Acc:HGNC:5412]27800.6440.6182No
30MDKmidkine [Source:HGNC Symbol;Acc:HGNC:6972]35800.4450.6009No
31TMEM165transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]37110.4170.6014No
32BIDBH3 interacting domain death agonist [Source:HGNC Symbol;Acc:HGNC:1050]38790.3840.6006No
33RDH10retinol dehydrogenase 10 [Source:HGNC Symbol;Acc:HGNC:19975]42810.3050.5926No
34UBDubiquitin D [Source:HGNC Symbol;Acc:HGNC:18795]51520.1680.5707No
35RASD1ras related dexamethasone induced 1 [Source:HGNC Symbol;Acc:HGNC:15828]54370.1290.5643No
36KDRkinase insert domain receptor [Source:HGNC Symbol;Acc:HGNC:6307]61360.0330.5457No
37CCL20C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619]64340.0000.5377No
38MUCL1mucin like 1 [Source:HGNC Symbol;Acc:HGNC:30588]65250.0000.5353No
39DEFB4Adefensin beta 4A [Source:HGNC Symbol;Acc:HGNC:2767]71950.0000.5172No
40WFDC2WAP four-disulfide core domain 2 [Source:HGNC Symbol;Acc:HGNC:15939]81350.0000.4918No
41PROM1prominin 1 [Source:HGNC Symbol;Acc:HGNC:9454]82460.0000.4888No
42S100A9S100 calcium binding protein A9 [Source:HGNC Symbol;Acc:HGNC:10499]85200.0000.4814No
43CRISP3cysteine rich secretory protein 3 [Source:HGNC Symbol;Acc:HGNC:16904]90670.0000.4666No
44LY6Elymphocyte antigen 6 family member E [Source:HGNC Symbol;Acc:HGNC:6727]91640.0000.4640No
45SLPIsecretory leukocyte peptidase inhibitor [Source:HGNC Symbol;Acc:HGNC:11092]92480.0000.4618No
46GPX3glutathione peroxidase 3 [Source:HGNC Symbol;Acc:HGNC:4555]94970.0000.4551No
47ADAM28ADAM metallopeptidase domain 28 [Source:HGNC Symbol;Acc:HGNC:206]97230.0000.4490No
48HS3ST1heparan sulfate-glucosamine 3-sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:5194]100000.0000.4415No
49CYP2F1cytochrome P450 family 2 subfamily F member 1 [Source:HGNC Symbol;Acc:HGNC:2632]103560.0000.4319No
50KLK10kallikrein related peptidase 10 [Source:HGNC Symbol;Acc:HGNC:6358]104560.0000.4292No
51KLK11kallikrein related peptidase 11 [Source:HGNC Symbol;Acc:HGNC:6359]104570.0000.4292No
52KLK12kallikrein related peptidase 12 [Source:HGNC Symbol;Acc:HGNC:6360]104580.0000.4292No
53CX3CL1C-X3-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:10647]107240.0000.4221No
54LCN2lipocalin 2 [Source:HGNC Symbol;Acc:HGNC:6526]109050.0000.4172No
55SLC26A4solute carrier family 26 member 4 [Source:HGNC Symbol;Acc:HGNC:8818]111380.0000.4109No
56TSPAN8tetraspanin 8 [Source:HGNC Symbol;Acc:HGNC:11855]114720.0000.4019No
57AKR1C1aldo-keto reductase family 1 member C1 [Source:HGNC Symbol;Acc:HGNC:384]115100.0000.4009No
58AKR1C2aldo-keto reductase family 1 member C2 [Source:HGNC Symbol;Acc:HGNC:385]115120.0000.4009No
59S100PS100 calcium binding protein P [Source:HGNC Symbol;Acc:HGNC:10504]116200.0000.3980No
60BACE2beta-secretase 2 [Source:HGNC Symbol;Acc:HGNC:934]116800.0000.3964No
61IGFBP3insulin like growth factor binding protein 3 [Source:HGNC Symbol;Acc:HGNC:5472]117300.0000.3951No
62MSMBmicroseminoprotein beta [Source:HGNC Symbol;Acc:HGNC:7372]123920.0000.3772No
63TNFSF10TNF superfamily member 10 [Source:HGNC Symbol;Acc:HGNC:11925]124300.0000.3762No
64VMO1vitelline membrane outer layer 1 homolog [Source:HGNC Symbol;Acc:HGNC:30387]124730.0000.3751No
65MUC4mucin 4, cell surface associated [Source:HGNC Symbol;Acc:HGNC:7514]127950.0000.3664No
66LINC00342long intergenic non-protein coding RNA 342 [Source:HGNC Symbol;Acc:HGNC:42470]129810.0000.3614No
67ZG16Bzymogen granule protein 16B [Source:HGNC Symbol;Acc:HGNC:30456]132450.0000.3542No
68TMC5transmembrane channel like 5 [Source:HGNC Symbol;Acc:HGNC:22999]143530.0000.3243No
69TMEM45Atransmembrane protein 45A [Source:HGNC Symbol;Acc:HGNC:25480]146920.0000.3152No
70CDC42EP5CDC42 effector protein 5 [Source:HGNC Symbol;Acc:HGNC:17408]161180.0000.2766No
71BPIFA1BPI fold containing family A member 1 [Source:HGNC Symbol;Acc:HGNC:15749]174930.0000.2394No
72BPIFB1BPI fold containing family B member 1 [Source:HGNC Symbol;Acc:HGNC:16108]175400.0000.2382No
73ANKRD36Cankyrin repeat domain 36C [Source:HGNC Symbol;Acc:HGNC:32946]177320.0000.2330No
74HILPDAhypoxia inducible lipid droplet associated [Source:HGNC Symbol;Acc:HGNC:28859]177770.0000.2318No
75HLA-DQA2major histocompatibility complex, class II, DQ alpha 2 [Source:HGNC Symbol;Acc:HGNC:4943]182740.0000.2184No
76HLA-DQA1major histocompatibility complex, class II, DQ alpha 1 [Source:HGNC Symbol;Acc:HGNC:4942]182750.0000.2184No
77LTFlactotransferrin [Source:HGNC Symbol;Acc:HGNC:6720]186080.0000.2094No
78MMP7matrix metallopeptidase 7 [Source:HGNC Symbol;Acc:HGNC:7174]189610.0000.1999No
79CXCL6C-X-C motif chemokine ligand 6 [Source:HGNC Symbol;Acc:HGNC:10643]193040.0000.1907No
80CXCL8C-X-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:6025]193090.0000.1906No
81CXCL1C-X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:4602]193180.0000.1903No
82CXCL3C-X-C motif chemokine ligand 3 [Source:HGNC Symbol;Acc:HGNC:4604]193200.0000.1903No
83SMIM31small integral membrane protein 31 [Source:HGNC Symbol;Acc:HGNC:49638]195700.0000.1836No
84HSD17B2hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]196320.0000.1819No
85PI3peptidase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:8947]198550.0000.1759No
86IDO1indoleamine 2,3-dioxygenase 1 [Source:HGNC Symbol;Acc:HGNC:6059]200320.0000.1712No
87TFF3trefoil factor 3 [Source:HGNC Symbol;Acc:HGNC:11757]205360.0000.1576No
88KYNUkynureninase [Source:HGNC Symbol;Acc:HGNC:6469]218120.0000.1231No
89PIGRpolymeric immunoglobulin receptor [Source:HGNC Symbol;Acc:HGNC:8968]225350.0000.1035No
90CCL2C-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:10618]226840.0000.0995No
91SCGB3A1secretoglobin family 3A member 1 [Source:HGNC Symbol;Acc:HGNC:18384]232590.0000.0840No
92SCGB1A1secretoglobin family 1A member 1 [Source:HGNC Symbol;Acc:HGNC:12523]239330.0000.0658No
93RARRES1retinoic acid receptor responder 1 [Source:HGNC Symbol;Acc:HGNC:9867]240670.0000.0622No
94CRYMcrystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]241350.0000.0604No
95MUC5Bmucin 5B, oligomeric mucus/gel-forming [Source:HGNC Symbol;Acc:HGNC:7516]241430.0000.0602No
96TFPI2tissue factor pathway inhibitor 2 [Source:HGNC Symbol;Acc:HGNC:11761]246720.0000.0459No
97SLC4A4solute carrier family 4 member 4 [Source:HGNC Symbol;Acc:HGNC:11030]249840.0000.0375No
98RIMS1regulating synaptic membrane exocytosis 1 [Source:HGNC Symbol;Acc:HGNC:17282]250570.0000.0356No
99ALDH1A3aldehyde dehydrogenase 1 family member A3 [Source:HGNC Symbol;Acc:HGNC:409]253240.0000.0284No
100AZGP1alpha-2-glycoprotein 1, zinc-binding [Source:HGNC Symbol;Acc:HGNC:910]263280.0000.0012No
101FCGBPFc fragment of IgG binding protein [Source:HGNC Symbol;Acc:HGNC:13572]263950.000-0.0006No
102XBP1X-box binding protein 1 [Source:HGNC Symbol;Acc:HGNC:12801]27305-0.035-0.0248No
103ATP12AATPase H+/K+ transporting non-gastric alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:13816]27428-0.052-0.0276No
104SRD5A3steroid 5 alpha-reductase 3 [Source:HGNC Symbol;Acc:HGNC:25812]27906-0.110-0.0395No
105SLC5A5solute carrier family 5 member 5 [Source:HGNC Symbol;Acc:HGNC:11040]28166-0.141-0.0451No
106IRAK3interleukin 1 receptor associated kinase 3 [Source:HGNC Symbol;Acc:HGNC:17020]28304-0.157-0.0473No
107CSTBcystatin B [Source:HGNC Symbol;Acc:HGNC:2482]28612-0.201-0.0537No
108RHOVras homolog family member V [Source:HGNC Symbol;Acc:HGNC:18313]29121-0.271-0.0648No
109LAG3lymphocyte activating 3 [Source:HGNC Symbol;Acc:HGNC:6476]29380-0.310-0.0688No
110ANPEPalanyl aminopeptidase, membrane [Source:HGNC Symbol;Acc:HGNC:500]29628-0.344-0.0722No
111SLC26A2solute carrier family 26 member 2 [Source:HGNC Symbol;Acc:HGNC:10994]30054-0.405-0.0798No
112CPceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]30058-0.406-0.0760No
113DUSP23dual specificity phosphatase 23 [Source:HGNC Symbol;Acc:HGNC:21480]30657-0.499-0.0873No
114HIPK2homeodomain interacting protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14402]30704-0.506-0.0837No
115RPS26ribosomal protein S26 [Source:HGNC Symbol;Acc:HGNC:10414]31532-0.653-0.0998No
116CTSBcathepsin B [Source:HGNC Symbol;Acc:HGNC:2527]31922-0.743-0.1032No
117STT3BSTT3 oligosaccharyltransferase complex catalytic subunit B [Source:HGNC Symbol;Acc:HGNC:30611]34210-1.414-0.1514No
118ERO1Aendoplasmic reticulum oxidoreductase 1 alpha [Source:HGNC Symbol;Acc:HGNC:13280]35421-2.027-0.1647No
119ADMadrenomedullin [Source:HGNC Symbol;Acc:HGNC:259]36003-2.504-0.1563No
120SLC9A3R2SLC9A3 regulator 2 [Source:HGNC Symbol;Acc:HGNC:11076]36145-2.660-0.1345No
121INSRinsulin receptor [Source:HGNC Symbol;Acc:HGNC:6091]36416-2.949-0.1135No
122SORDsorbitol dehydrogenase [Source:HGNC Symbol;Acc:HGNC:11184]36574-3.127-0.0876No
123CBR3carbonyl reductase 3 [Source:HGNC Symbol;Acc:HGNC:1549]36594-3.142-0.0579No
124PTP4A3protein tyrosine phosphatase 4A3 [Source:HGNC Symbol;Acc:HGNC:9636]36707-3.354-0.0287No
125SERPINF1serpin family F member 1 [Source:HGNC Symbol;Acc:HGNC:8824]36984-4.0570.0029No
Table: GSEA details [plain text format]



Fig 2: TRAVAGLINI_LUNG_MUCOUS_CELL   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: TRAVAGLINI_LUNG_MUCOUS_CELL: Random ES distribution   
Gene set null distribution of ES for TRAVAGLINI_LUNG_MUCOUS_CELL