Datasetgreenberg_collapsed_to_symbols.greenbergcls.cls
#WT_LPS_versus_WT_NA.greenbergcls.cls
#WT_LPS_versus_WT_NA_repos
Phenotypegreenbergcls.cls#WT_LPS_versus_WT_NA_repos
Upregulated in classWT_NA
GeneSetZHONG_PFC_C2_UNKNOWN_NPC
Enrichment Score (ES)-0.8921476
Normalized Enrichment Score (NES)-1.8027941
Nominal p-value0.0
FDR q-value0.0
FWER p-Value0.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: ZHONG_PFC_C2_UNKNOWN_NPC   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CKS2CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:2000]19020.962-0.0460No
2CNOT7CCR4-NOT transcription complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:14101]24940.736-0.0579No
3CALB2calbindin 2 [Source:HGNC Symbol;Acc:HGNC:1435]38290.395-0.0917No
4KDM4Alysine demethylase 4A [Source:HGNC Symbol;Acc:HGNC:22978]60590.044-0.1517No
5AC091057.1OTU deubiquitinase 7A pseudogene [Source:NCBI gene (formerly Entrezgene);Acc:100288637]127830.000-0.3333No
6NDST4N-deacetylase and N-sulfotransferase 4 [Source:HGNC Symbol;Acc:HGNC:20779]134720.000-0.3519No
7DNALI1dynein axonemal light intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:14353]177530.000-0.4675No
8ZNF649zinc finger protein 649 [Source:HGNC Symbol;Acc:HGNC:25741]211870.000-0.5603No
9AMBNameloblastin [Source:HGNC Symbol;Acc:HGNC:452]242920.000-0.6441No
10MFAP2microfibril associated protein 2 [Source:HGNC Symbol;Acc:HGNC:7033]251520.000-0.6673No
11ITCHitchy E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13890]28651-0.206-0.7607No
12TUBB6tubulin beta 6 class V [Source:HGNC Symbol;Acc:HGNC:20776]29054-0.261-0.7701No
13HJURPHolliday junction recognition protein [Source:HGNC Symbol;Acc:HGNC:25444]29215-0.283-0.7728No
14PRR11proline rich 11 [Source:HGNC Symbol;Acc:HGNC:25619]31394-0.626-0.8281No
15PTTG1PTTG1 regulator of sister chromatid separation, securin [Source:HGNC Symbol;Acc:HGNC:9690]31585-0.666-0.8296No
16TUBB4Btubulin beta 4B class IVb [Source:HGNC Symbol;Acc:HGNC:20771]33447-1.152-0.8734No
17ARL6IP1ADP ribosylation factor like GTPase 6 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:697]33885-1.299-0.8779No
18TROAPtrophinin associated protein [Source:HGNC Symbol;Acc:HGNC:12327]34306-1.460-0.8811No
19G2E3G2/M-phase specific E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:20338]34441-1.517-0.8763No
20LDHAlactate dehydrogenase A [Source:HGNC Symbol;Acc:HGNC:6535]35030-1.784-0.8822Yes
21KPNA2karyopherin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6395]35063-1.804-0.8730Yes
22ARHGAP11ARho GTPase activating protein 11A [Source:HGNC Symbol;Acc:HGNC:15783]35215-1.897-0.8664Yes
23RANGAP1Ran GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9854]35245-1.916-0.8565Yes
24DEPDC1DEP domain containing 1 [Source:HGNC Symbol;Acc:HGNC:22949]35388-2.006-0.8491Yes
25TACC3transforming acidic coiled-coil containing protein 3 [Source:HGNC Symbol;Acc:HGNC:11524]35484-2.073-0.8401Yes
26REEP4receptor accessory protein 4 [Source:HGNC Symbol;Acc:HGNC:26176]35544-2.109-0.8299Yes
27MZT1mitotic spindle organizing protein 1 [Source:HGNC Symbol;Acc:HGNC:33830]35653-2.203-0.8205Yes
28CENPEcentromere protein E [Source:HGNC Symbol;Acc:HGNC:1856]35717-2.250-0.8096Yes
29CCNB1cyclin B1 [Source:HGNC Symbol;Acc:HGNC:1579]35735-2.266-0.7974Yes
30NDE1nudE neurodevelopment protein 1 [Source:HGNC Symbol;Acc:HGNC:17619]35777-2.301-0.7857Yes
31TUBA1Ctubulin alpha 1c [Source:HGNC Symbol;Acc:HGNC:20768]35782-2.303-0.7729Yes
32AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]35816-2.333-0.7608Yes
33TPX2TPX2 microtubule nucleation factor [Source:HGNC Symbol;Acc:HGNC:1249]35837-2.347-0.7482Yes
34OIP5Opa interacting protein 5 [Source:HGNC Symbol;Acc:HGNC:20300]35899-2.411-0.7363Yes
35SPDL1spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]35981-2.483-0.7246Yes
36PHF19PHD finger protein 19 [Source:HGNC Symbol;Acc:HGNC:24566]36051-2.548-0.7123Yes
37GTSE1G2 and S-phase expressed 1 [Source:HGNC Symbol;Acc:HGNC:13698]36081-2.586-0.6986Yes
38CDKN3cyclin dependent kinase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:1791]36108-2.616-0.6847Yes
39SPAG5sperm associated antigen 5 [Source:HGNC Symbol;Acc:HGNC:13452]36141-2.658-0.6707Yes
40DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]36174-2.692-0.6565Yes
41KIF20Akinesin family member 20A [Source:HGNC Symbol;Acc:HGNC:9787]36227-2.746-0.6426Yes
42CITcitron rho-interacting serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1985]36259-2.775-0.6279Yes
43MIS18BP1MIS18 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:20190]36262-2.779-0.6124Yes
44UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]36279-2.795-0.5972Yes
45CEP70centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]36295-2.815-0.5819Yes
46TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]36339-2.870-0.5670Yes
47NCAPD2non-SMC condensin I complex subunit D2 [Source:HGNC Symbol;Acc:HGNC:24305]36376-2.899-0.5518Yes
48TRIM59tripartite motif containing 59 [Source:HGNC Symbol;Acc:HGNC:30834]36428-2.961-0.5366Yes
49CDCA8cell division cycle associated 8 [Source:HGNC Symbol;Acc:HGNC:14629]36469-2.992-0.5209Yes
50SGO2shugoshin 2 [Source:HGNC Symbol;Acc:HGNC:30812]36478-3.003-0.5044Yes
51PLK1polo like kinase 1 [Source:HGNC Symbol;Acc:HGNC:9077]36483-3.006-0.4877Yes
52CDCA3cell division cycle associated 3 [Source:HGNC Symbol;Acc:HGNC:14624]36535-3.075-0.4719Yes
53MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]36592-3.140-0.4558Yes
54DCXRdicarbonyl and L-xylulose reductase [Source:HGNC Symbol;Acc:HGNC:18985]36605-3.169-0.4384Yes
55FAM83Dfamily with sequence similarity 83 member D [Source:HGNC Symbol;Acc:HGNC:16122]36609-3.173-0.4208Yes
56CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]36630-3.207-0.4034Yes
57KIF4Akinesin family member 4A [Source:HGNC Symbol;Acc:HGNC:13339]36650-3.229-0.3858Yes
58CDCA2cell division cycle associated 2 [Source:HGNC Symbol;Acc:HGNC:14623]36673-3.282-0.3681Yes
59CKAP2Lcytoskeleton associated protein 2 like [Source:HGNC Symbol;Acc:HGNC:26877]36687-3.310-0.3499Yes
60KIF22kinesin family member 22 [Source:HGNC Symbol;Acc:HGNC:6391]36692-3.321-0.3315Yes
61CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]36709-3.356-0.3132Yes
62KNSTRNkinetochore localized astrin (SPAG5) binding protein [Source:HGNC Symbol;Acc:HGNC:30767]36731-3.399-0.2947Yes
63RACGAP1Rac GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9804]36811-3.559-0.2770Yes
64AURKBaurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]36833-3.603-0.2574Yes
65KIF2Ckinesin family member 2C [Source:HGNC Symbol;Acc:HGNC:6393]36868-3.675-0.2378Yes
66NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]36870-3.679-0.2172Yes
67CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]36882-3.715-0.1967Yes
68TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]36894-3.758-0.1760Yes
69PIF1PIF1 5'-to-3' DNA helicase [Source:HGNC Symbol;Acc:HGNC:26220]36919-3.828-0.1553Yes
70NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36922-3.842-0.1339Yes
71CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36955-3.967-0.1125Yes
72CDC25Bcell division cycle 25B [Source:HGNC Symbol;Acc:HGNC:1726]36964-3.986-0.0905Yes
73NEK2NIMA related kinase 2 [Source:HGNC Symbol;Acc:HGNC:7745]36971-4.005-0.0683Yes
74NEIL3nei like DNA glycosylase 3 [Source:HGNC Symbol;Acc:HGNC:24573]36996-4.111-0.0459Yes
75PSRC1proline and serine rich coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:24472]37009-4.173-0.0229Yes
76ASPMassembly factor for spindle microtubules [Source:HGNC Symbol;Acc:HGNC:19048]37059-4.4850.0008Yes
Table: GSEA details [plain text format]



Fig 2: ZHONG_PFC_C2_UNKNOWN_NPC   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: ZHONG_PFC_C2_UNKNOWN_NPC: Random ES distribution   
Gene set null distribution of ES for ZHONG_PFC_C2_UNKNOWN_NPC