Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetCHR13Q13
Enrichment Score (ES)-0.63803583
Normalized Enrichment Score (NES)-1.3170055
Nominal p-value0.053380784
FDR q-value0.5530823
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: CHR13Q13   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1UFM1ubiquitin fold modifier 1 [Source:HGNC Symbol;Acc:HGNC:20597]9011.5540.0345No
2LAMTOR3P1late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:39726]12401.3050.0748No
3EEF1DP3eukaryotic translation elongation factor 1 delta pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:30486]32430.5720.0424No
4HSPD1P9heat shock protein family D (Hsp60) member 1 pseudogene 9 [Source:HGNC Symbol;Acc:HGNC:35132]36550.4820.0496No
5EIF4A1P5eukaryotic translation initiation factor 4A1 pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:37924]39150.4330.0590No
6CSNK1A1Lcasein kinase 1 alpha 1 like [Source:HGNC Symbol;Acc:HGNC:20289]49770.2480.0397No
7TRPC4transient receptor potential cation channel subfamily C member 4 [Source:HGNC Symbol;Acc:HGNC:12336]57980.1240.0222No
8RPL29P28ribosomal protein L29 pseudogene 28 [Source:HGNC Symbol;Acc:HGNC:36842]58790.1100.0243No
9NBEAneurobeachin [Source:HGNC Symbol;Acc:HGNC:7648]60180.0870.0238No
10STARD13-ASSTARD13 antisense RNA [Source:HGNC Symbol;Acc:HGNC:40873]70060.000-0.0028No
11FREM2FRAS1 related extracellular matrix 2 [Source:HGNC Symbol;Acc:HGNC:25396]71620.000-0.0070No
12CCNA1cyclin A1 [Source:HGNC Symbol;Acc:HGNC:1577]77820.000-0.0237No
13SOHLH2spermatogenesis and oogenesis specific basic helix-loop-helix 2 [Source:HGNC Symbol;Acc:HGNC:26026]81460.000-0.0335No
14NDE1P2nudE neurodevelopment protein 1 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:49116]86060.000-0.0460No
15DCLK1doublecortin like kinase 1 [Source:HGNC Symbol;Acc:HGNC:2700]88750.000-0.0532No
16LINC01048long intergenic non-protein coding RNA 1048 [Source:HGNC Symbol;Acc:HGNC:49042]92550.000-0.0634No
17FREM2-AS1FREM2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:39964]96370.000-0.0737No
18POSTNperiostin [Source:HGNC Symbol;Acc:HGNC:16953]104240.000-0.0950No
19TCEAL4P1transcription elongation factor A like 4 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:39582]105220.000-0.0976No
20RNU5A-4PRNA, U5A small nuclear 4, pseudogene [Source:HGNC Symbol;Acc:HGNC:42521]106600.000-0.1013No
21SERTM1serine rich and transmembrane domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33792]108140.000-0.1054No
22NXT1P1nuclear transport factor 2 like export factor 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:39708]109820.000-0.1099No
23CCDC169-SOHLH2CCDC169-SOHLH2 readthrough [Source:HGNC Symbol;Acc:HGNC:38866]110160.000-0.1108No
24GAPDHP34glyceraldehyde 3 phosphate dehydrogenase pseudogene 34 [Source:HGNC Symbol;Acc:HGNC:37786]110670.000-0.1122No
25STOML3stomatin like 3 [Source:HGNC Symbol;Acc:HGNC:19420]114630.000-0.1228No
26N4BP2L2-IT2N4BPL2 intronic transcript 2 [Source:HGNC Symbol;Acc:HGNC:25038]115740.000-0.1258No
27RXFP2relaxin family peptide receptor 2 [Source:HGNC Symbol;Acc:HGNC:17318]118220.000-0.1325No
28RN7SKP1RN7SK pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:42619]118320.000-0.1327No
29LINC00366long intergenic non-protein coding RNA 366 [Source:HGNC Symbol;Acc:HGNC:42688]131240.000-0.1676No
30TOMM22P3TOMM22 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:38739]132840.000-0.1719No
31LINC02344long intergenic non-protein coding RNA 2344 [Source:HGNC Symbol;Acc:HGNC:53264]137730.000-0.1851No
32LINC02343long intergenic non-protein coding RNA 2343 [Source:HGNC Symbol;Acc:HGNC:53263]137740.000-0.1851No
33LINC02334long intergenic non-protein coding RNA 2334 [Source:HGNC Symbol;Acc:HGNC:53254]137840.000-0.1853No
34RNY1P4RNY1 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:42481]140380.000-0.1922No
35IFIT1P1interferon induced protein with tetratricopeptide repeats 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:5408]141160.000-0.1943No
36RNU6-71PRNA, U6 small nuclear 71, pseudogene [Source:HGNC Symbol;Acc:HGNC:42561]153890.000-0.2286No
37MAB21L1mab-21 like 1 [Source:HGNC Symbol;Acc:HGNC:6757]159600.000-0.2440No
38KLklotho [Source:HGNC Symbol;Acc:HGNC:6344]162730.000-0.2524No
39VDAC1P12voltage dependent anion channel 1 pseudogene 12 [Source:HGNC Symbol;Acc:HGNC:39680]163350.000-0.2541No
40PHBP13prohibitin pseudogene 13 [Source:HGNC Symbol;Acc:HGNC:39292]164460.000-0.2571No
41ZAR1Lzygote arrest 1 like [Source:HGNC Symbol;Acc:HGNC:37116]164650.000-0.2576No
42SCAND3P1SCAN domain containing 3 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:42037]170150.000-0.2724No
43SPART-AS1SPART antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:39933]178780.000-0.2957No
44PLA2G12AP2phospholipase A2 group XIIA pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:39249]179110.000-0.2965No
45GAMTP2guanidinoacetate N-methyltransferase pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:37697]192770.000-0.3334No
46FRY-AS1FRY antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:39725]197840.000-0.3471No
47STARD13StAR related lipid transfer domain containing 13 [Source:HGNC Symbol;Acc:HGNC:19164]199310.000-0.3510No
48ANKRD26P2ankyrin repeat domain 26 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:39687]205300.000-0.3672No
49H2ACP1H2AC histone family pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:42647]214770.000-0.3927No
50RNU6-56PRNA, U6 small nuclear 56, pseudogene [Source:HGNC Symbol;Acc:HGNC:42546]215570.000-0.3949No
51STARD13-IT1STARD13 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41453]237410.000-0.4539No
52ARL2BPP3ADP ribosylation factor like GTPase 2 binding protein pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:39447]238670.000-0.4572No
53LINC00547long intergenic non-protein coding RNA 547 [Source:HGNC Symbol;Acc:HGNC:43682]242670.000-0.4680No
54LINC00571long intergenic non-protein coding RNA 571 [Source:HGNC Symbol;Acc:HGNC:43721]243770.000-0.4710No
55LINC00437long intergenic non-protein coding RNA 437 [Source:HGNC Symbol;Acc:HGNC:42772]246700.000-0.4789No
56LINC00423long intergenic non-protein coding RNA 423 [Source:HGNC Symbol;Acc:HGNC:42758]246890.000-0.4793No
57LINC00457long intergenic non-protein coding RNA 457 [Source:HGNC Symbol;Acc:HGNC:42805]248070.000-0.4825No
58LINC00445long intergenic non-protein coding RNA 445 [Source:HGNC Symbol;Acc:HGNC:42782]248270.000-0.4830No
59ATP8A2P2ATPase phospholipid transporting 8A2 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:39663]253000.000-0.4958No
60SMAD9-IT1SMAD9 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:39963]259930.000-0.5145No
61CCDC169coiled-coil domain containing 169 [Source:HGNC Symbol;Acc:HGNC:34361]261780.000-0.5194No
62RNA5SP26RNA, 5S ribosomal pseudogene 26 [Source:HGNC Symbol;Acc:HGNC:42602]264930.000-0.5279No
63PRDX3P3peroxiredoxin 3 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:39266]270990.000-0.5443No
64SUPT20HSPT20 homolog, SAGA complex component [Source:HGNC Symbol;Acc:HGNC:20596]28758-0.139-0.5838No
65N4BP2L2NEDD4 binding protein 2 like 2 [Source:HGNC Symbol;Acc:HGNC:26916]29967-0.311-0.6046Yes
66ALG5ALG5 dolichyl-phosphate beta-glucosyltransferase [Source:HGNC Symbol;Acc:HGNC:20266]30285-0.353-0.5999Yes
67PROSER1proline and serine rich 1 [Source:HGNC Symbol;Acc:HGNC:20291]30474-0.379-0.5906Yes
68NHLRC3NHL repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:33751]30819-0.436-0.5834Yes
69SPARTspartin [Source:HGNC Symbol;Acc:HGNC:18514]31835-0.604-0.5879Yes
70RFC3replication factor C subunit 3 [Source:HGNC Symbol;Acc:HGNC:9971]33690-1.077-0.5973Yes
71EXOSC8exosome component 8 [Source:HGNC Symbol;Acc:HGNC:17035]34270-1.270-0.5648Yes
72RFXAPregulatory factor X associated protein [Source:HGNC Symbol;Acc:HGNC:9988]34411-1.321-0.5186Yes
73PDS5BPDS5 cohesin associated factor B [Source:HGNC Symbol;Acc:HGNC:20418]34480-1.345-0.4694Yes
74SMAD9SMAD family member 9 [Source:HGNC Symbol;Acc:HGNC:6774]34741-1.439-0.4220Yes
75BRCA2BRCA2 DNA repair associated [Source:HGNC Symbol;Acc:HGNC:1101]36585-2.864-0.3633Yes
76FRYFRY microtubule binding protein [Source:HGNC Symbol;Acc:HGNC:20367]36674-2.986-0.2526Yes
77N4BP2L1NEDD4 binding protein 2 like 1 [Source:HGNC Symbol;Acc:HGNC:25037]36824-3.335-0.1303Yes
78RPS12P24ribosomal protein S12 pseudogene 24 [Source:HGNC Symbol;Acc:HGNC:35561]36919-3.6290.0046Yes
Table: GSEA details [plain text format]



Fig 2: CHR13Q13   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CHR13Q13: Random ES distribution   
Gene set null distribution of ES for CHR13Q13