Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_GAQ
GeneSetCHR17Q12
Enrichment Score (ES)0.472467
Normalized Enrichment Score (NES)1.2363434
Nominal p-value0.04494382
FDR q-value0.4536562
FWER p-Value0.968
Table: GSEA Results Summary



Fig 1: Enrichment plot: CHR17Q12   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CCL5C-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10632]44.8870.0612Yes
2CCL4C-C motif chemokine ligand 4 [Source:HGNC Symbol;Acc:HGNC:10630]94.8130.1215Yes
3SLFN12schlafen family member 12 [Source:HGNC Symbol;Acc:HGNC:25500]833.6320.1651Yes
4SLFN13schlafen family member 13 [Source:HGNC Symbol;Acc:HGNC:26481]1802.9990.2001Yes
5SLFN5schlafen family member 5 [Source:HGNC Symbol;Acc:HGNC:28286]3062.5110.2283Yes
6RFFLring finger and FYVE like domain containing E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:24821]4412.1770.2519Yes
7SLFN11schlafen family member 11 [Source:HGNC Symbol;Acc:HGNC:26633]4832.1100.2773Yes
8CCL4L2C-C motif chemokine ligand 4 like 2 [Source:HGNC Symbol;Acc:HGNC:24066]4842.1100.3038Yes
9SLFN12Lschlafen family member 12 like [Source:HGNC Symbol;Acc:HGNC:33920]6371.8620.3230Yes
10NLE1notchless homolog 1 [Source:HGNC Symbol;Acc:HGNC:19889]8191.6390.3387Yes
11PIGWphosphatidylinositol glycan anchor biosynthesis class W [Source:HGNC Symbol;Acc:HGNC:23213]9191.5420.3554Yes
12CDK12cyclin dependent kinase 12 [Source:HGNC Symbol;Acc:HGNC:24224]10011.4700.3716Yes
13MIEN1migration and invasion enhancer 1 [Source:HGNC Symbol;Acc:HGNC:28230]11141.3860.3860Yes
14CCT6Bchaperonin containing TCP1 subunit 6B [Source:HGNC Symbol;Acc:HGNC:1621]13151.2640.3964Yes
15UNC45Bunc-45 myosin chaperone B [Source:HGNC Symbol;Acc:HGNC:14304]15131.1490.4055Yes
16STARD3StAR related lipid transfer domain containing 3 [Source:HGNC Symbol;Acc:HGNC:17579]15291.1440.4195Yes
17DHRS11dehydrogenase/reductase 11 [Source:HGNC Symbol;Acc:HGNC:28639]19060.9740.4215Yes
18PEX12peroxisomal biogenesis factor 12 [Source:HGNC Symbol;Acc:HGNC:8854]19170.9690.4334Yes
19E2F3P1E2F transcription factor 3 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:3116]20620.9110.4410Yes
20LASP1LIM and SH3 protein 1 [Source:HGNC Symbol;Acc:HGNC:6513]21740.8710.4489Yes
21MYO19myosin XIX [Source:HGNC Symbol;Acc:HGNC:26234]22900.8300.4562Yes
22CWC25CWC25 spliceosome associated protein homolog [Source:HGNC Symbol;Acc:HGNC:25989]24780.7730.4608Yes
23PSMB3proteasome 20S subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540]29610.6400.4558Yes
24FBXO47F-box protein 47 [Source:HGNC Symbol;Acc:HGNC:31969]30270.6250.4619Yes
25AATFapoptosis antagonizing transcription factor [Source:HGNC Symbol;Acc:HGNC:19235]32110.5810.4642Yes
26YWHAEP7tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 7 [Source:HGNC Symbol;Acc:HGNC:49437]34280.5300.4650Yes
27MED1mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]35440.5040.4683Yes
28TOMM20P2TOMM20 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:50519]36170.4900.4725Yes
29TCAPtitin-cap [Source:HGNC Symbol;Acc:HGNC:11610]41090.3980.4642No
30CCL2C-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:10618]41220.3950.4688No
31LIG3DNA ligase 3 [Source:HGNC Symbol;Acc:HGNC:6600]45560.3160.4611No
32AP2B1adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]52960.1920.4435No
33RPL19ribosomal protein L19 [Source:HGNC Symbol;Acc:HGNC:10312]54630.1670.4411No
34GGNBP2gametogenetin binding protein 2 [Source:HGNC Symbol;Acc:HGNC:19357]56850.1390.4369No
35ZNHIT3zinc finger HIT-type containing 3 [Source:HGNC Symbol;Acc:HGNC:12309]60050.0880.4293No
36ZNF830zinc finger protein 830 [Source:HGNC Symbol;Acc:HGNC:28291]61270.0740.4270No
37SRCIN1SRC kinase signaling inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:29506]61720.0670.4266No
38EPOPelongin BC and polycomb repressive complex 2 associated protein [Source:HGNC Symbol;Acc:HGNC:34493]65040.0100.4178No
39CCL14C-C motif chemokine ligand 14 [Source:HGNC Symbol;Acc:HGNC:10612]65950.0000.4154No
40CCL13C-C motif chemokine ligand 13 [Source:HGNC Symbol;Acc:HGNC:10611]65960.0000.4154No
41CCL11C-C motif chemokine ligand 11 [Source:HGNC Symbol;Acc:HGNC:10610]65970.0000.4154No
42CCL18C-C motif chemokine ligand 18 [Source:HGNC Symbol;Acc:HGNC:10616]66170.0000.4149No
43CCL16C-C motif chemokine ligand 16 [Source:HGNC Symbol;Acc:HGNC:10614]66200.0000.4148No
44CCL15C-C motif chemokine ligand 15 [Source:HGNC Symbol;Acc:HGNC:10613]66220.0000.4148No
45CCL23C-C motif chemokine ligand 23 [Source:HGNC Symbol;Acc:HGNC:10622]66260.0000.4147No
46TBC1D3TBC1 domain family member 3 [Source:HGNC Symbol;Acc:HGNC:19031]77830.0000.3834No
47LYZL6lysozyme like 6 [Source:HGNC Symbol;Acc:HGNC:29614]80960.0000.3750No
48ASIC2acid sensing ion channel subunit 2 [Source:HGNC Symbol;Acc:HGNC:99]81480.0000.3736No
49MIR2909microRNA 2909 [Source:HGNC Symbol;Acc:HGNC:38372]93220.0000.3419No
50RASL10BRAS like family 10 member B [Source:HGNC Symbol;Acc:HGNC:30295]99750.0000.3242No
51GRB7growth factor receptor bound protein 7 [Source:HGNC Symbol;Acc:HGNC:4567]100410.0000.3225No
52AA06uncharacterized LOC100506677 [Source:NCBI gene (formerly Entrezgene);Acc:100506677]103430.0000.3143No
53PNMTphenylethanolamine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:9160]107190.0000.3042No
54C17orf78chromosome 17 open reading frame 78 [Source:HGNC Symbol;Acc:HGNC:26831]118950.0000.2724No
55C17orf98chromosome 17 open reading frame 98 [Source:HGNC Symbol;Acc:HGNC:34492]119170.0000.2718No
56ERBB2erb-b2 receptor tyrosine kinase 2 [Source:HGNC Symbol;Acc:HGNC:3430]121570.0000.2653No
57SNHG30small nucleolar RNA host gene 30 [Source:HGNC Symbol;Acc:HGNC:52836]123560.0000.2600No
58SLFN14schlafen family member 14 [Source:HGNC Symbol;Acc:HGNC:32689]124170.0000.2584No
59RNU6-1192PRNA, U6 small nuclear 1192, pseudogene [Source:HGNC Symbol;Acc:HGNC:48155]130240.0000.2420No
60CCL3L3C-C motif chemokine ligand 3 like 3 [Source:HGNC Symbol;Acc:HGNC:30554]148930.0000.1914No
61SLC35G3solute carrier family 35 member G3 [Source:HGNC Symbol;Acc:HGNC:26848]160100.0000.1612No
62RN7SL301PRNA, 7SL, cytoplasmic 301, pseudogene [Source:HGNC Symbol;Acc:HGNC:46317]160840.0000.1592No
63SNORA21small nucleolar RNA, H/ACA box 21 [Source:HGNC Symbol;Acc:HGNC:32611]161600.0000.1572No
64C17orf102chromosome 17 open reading frame 102 [Source:HGNC Symbol;Acc:HGNC:34412]166340.0000.1444No
65RNU6-866PRNA, U6 small nuclear 866, pseudogene [Source:HGNC Symbol;Acc:HGNC:47829]171250.0000.1312No
66RNA5SP440RNA, 5S ribosomal pseudogene 440 [Source:HGNC Symbol;Acc:HGNC:43340]173460.0000.1252No
67RNA5SP439RNA, 5S ribosomal pseudogene 439 [Source:HGNC Symbol;Acc:HGNC:43339]173800.0000.1243No
68RNA5SP438RNA, 5S ribosomal pseudogene 438 [Source:HGNC Symbol;Acc:HGNC:43338]173810.0000.1243No
69CCL15-CCL14CCL15-CCL14 readthrough (NMD candidate) [Source:HGNC Symbol;Acc:HGNC:44436]174930.0000.1213No
70SNORD7small nucleolar RNA, C/D box 7 [Source:HGNC Symbol;Acc:HGNC:32704]175300.0000.1203No
71HNF1BHNF1 homeobox B [Source:HGNC Symbol;Acc:HGNC:11630]176530.0000.1170No
72PPP1R1Bprotein phosphatase 1 regulatory inhibitor subunit 1B [Source:HGNC Symbol;Acc:HGNC:9287]176950.0000.1159No
73LRRC37A9Pleucine rich repeat containing 37 member A9, pseudogene [Source:HGNC Symbol;Acc:HGNC:43813]177380.0000.1148No
74RNU6-489PRNA, U6 small nuclear 489, pseudogene [Source:HGNC Symbol;Acc:HGNC:47452]185250.0000.0935No
75RNU6-233PRNA, U6 small nuclear 233, pseudogene [Source:HGNC Symbol;Acc:HGNC:47196]189300.0000.0826No
76NEUROD2neuronal differentiation 2 [Source:HGNC Symbol;Acc:HGNC:7763]192820.0000.0731No
77LINC01989long intergenic non-protein coding RNA 1989 [Source:HGNC Symbol;Acc:HGNC:52821]204180.0000.0424No
78HEATR9HEAT repeat containing 9 [Source:HGNC Symbol;Acc:HGNC:26548]216890.0000.0080No
79LINC02079long intergenic non-protein coding RNA 2079 [Source:HGNC Symbol;Acc:HGNC:52927]217850.0000.0055No
80TBC1D3KTBC1 domain family member 3K [Source:HGNC Symbol;Acc:HGNC:51245]224190.000-0.0117No
81TBC1D3LTBC1 domain family member 3L [Source:HGNC Symbol;Acc:HGNC:51246]224200.000-0.0117No
82TBC1D3BTBC1 domain family member 3B [Source:HGNC Symbol;Acc:HGNC:27011]224260.000-0.0118No
83TBC1D3ETBC1 domain family member 3E [Source:HGNC Symbol;Acc:HGNC:27071]224280.000-0.0118No
84TBC1D3FTBC1 domain family member 3F [Source:HGNC Symbol;Acc:HGNC:18257]224290.000-0.0118No
85TBC1D3CTBC1 domain family member 3C [Source:HGNC Symbol;Acc:HGNC:24889]224310.000-0.0119No
86TBC1D3DTBC1 domain family member 3D [Source:HGNC Symbol;Acc:HGNC:28944]224320.000-0.0119No
87TBC1D3ITBC1 domain family member 3I [Source:HGNC Symbol;Acc:HGNC:32709]224330.000-0.0119No
88TBC1D3JTBC1 domain family member 3J [Source:HGNC Symbol;Acc:HGNC:51247]224350.000-0.0119No
89TBC1D3GTBC1 domain family member 3G [Source:HGNC Symbol;Acc:HGNC:29860]224370.000-0.0119No
90TBC1D3HTBC1 domain family member 3H [Source:HGNC Symbol;Acc:HGNC:30708]224380.000-0.0119No
91TMEM132Etransmembrane protein 132E [Source:HGNC Symbol;Acc:HGNC:26991]226700.000-0.0182No
92CCL8C-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:10635]230620.000-0.0287No
93CCL7C-C motif chemokine ligand 7 [Source:HGNC Symbol;Acc:HGNC:10634]230640.000-0.0288No
94CCL1C-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:10609]230720.000-0.0290No
95LHX1LIM homeobox 1 [Source:HGNC Symbol;Acc:HGNC:6593]234070.000-0.0380No
96FNDC8fibronectin type III domain containing 8 [Source:HGNC Symbol;Acc:HGNC:25286]261180.000-0.1113No
97RNU6-840PRNA, U6 small nuclear 840, pseudogene [Source:HGNC Symbol;Acc:HGNC:47803]262260.000-0.1142No
98GAS2L2growth arrest specific 2 like 2 [Source:HGNC Symbol;Acc:HGNC:24846]270590.000-0.1367No
99MIR4734microRNA 4734 [Source:HGNC Symbol;Acc:HGNC:41572]274860.000-0.1483No
100MIR4726microRNA 4726 [Source:HGNC Symbol;Acc:HGNC:41722]275040.000-0.1487No
101MIR4728microRNA 4728 [Source:HGNC Symbol;Acc:HGNC:41632]275070.000-0.1488No
102MIR4727microRNA 4727 [Source:HGNC Symbol;Acc:HGNC:41709]275080.000-0.1488No
103LRRC37A11Pleucine rich repeat containing 37 member A11, pseudogene [Source:HGNC Symbol;Acc:HGNC:43815]277690.000-0.1558No
104CCL3C-C motif chemokine ligand 3 [Source:HGNC Symbol;Acc:HGNC:10627]27977-0.029-0.1610No
105MLLT6MLLT6, PHD finger containing [Source:HGNC Symbol;Acc:HGNC:7138]28150-0.056-0.1650No
106ARHGAP23Rho GTPase activating protein 23 [Source:HGNC Symbol;Acc:HGNC:29293]28295-0.076-0.1679No
107PIP4K2Bphosphatidylinositol-5-phosphate 4-kinase type 2 beta [Source:HGNC Symbol;Acc:HGNC:8998]28863-0.152-0.1814No
108SOCS7suppressor of cytokine signaling 7 [Source:HGNC Symbol;Acc:HGNC:29846]29108-0.186-0.1856No
109RPL23ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]29714-0.275-0.1986No
110PGAP3post-GPI attachment to proteins phospholipase 3 [Source:HGNC Symbol;Acc:HGNC:23719]30321-0.357-0.2105No
111TAF15TATA-box binding protein associated factor 15 [Source:HGNC Symbol;Acc:HGNC:11547]30393-0.368-0.2078No
112SYNRGsynergin gamma [Source:HGNC Symbol;Acc:HGNC:557]30683-0.415-0.2104No
113C17orf50chromosome 17 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:29581]30713-0.418-0.2059No
114ARL5CADP ribosylation factor like GTPase 5C [Source:HGNC Symbol;Acc:HGNC:31111]31424-0.531-0.2185No
115MRM1mitochondrial rRNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:26202]32127-0.667-0.2291No
116CISD3CDGSH iron sulfur domain 3 [Source:HGNC Symbol;Acc:HGNC:27578]32454-0.733-0.2287No
117HMGB1P24high mobility group box 1 pseudogene 24 [Source:HGNC Symbol;Acc:HGNC:39115]32574-0.766-0.2223No
118ACACAacetyl-CoA carboxylase alpha [Source:HGNC Symbol;Acc:HGNC:84]33045-0.884-0.2240No
119MMP28matrix metallopeptidase 28 [Source:HGNC Symbol;Acc:HGNC:14366]33257-0.947-0.2178No
120MRPL45mitochondrial ribosomal protein L45 [Source:HGNC Symbol;Acc:HGNC:16651]33960-1.171-0.2221No
121RDM1RAD52 motif containing 1 [Source:HGNC Symbol;Acc:HGNC:19950]34166-1.233-0.2122No
122TADA2Atranscriptional adaptor 2A [Source:HGNC Symbol;Acc:HGNC:11531]34167-1.234-0.1967No
123CACNB1calcium voltage-gated channel auxiliary subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:1401]34946-1.541-0.1984No
124DDX52DExD-box helicase 52 [Source:HGNC Symbol;Acc:HGNC:20038]34970-1.553-0.1795No
125LINC00672long intergenic non-protein coding RNA 672 [Source:HGNC Symbol;Acc:HGNC:44353]35099-1.625-0.1626No
126DUSP14dual specificity phosphatase 14 [Source:HGNC Symbol;Acc:HGNC:17007]35138-1.646-0.1430No
127PLXDC1plexin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20945]35210-1.679-0.1238No
128GPR179G protein-coupled receptor 179 [Source:HGNC Symbol;Acc:HGNC:31371]35544-1.864-0.1094No
129RAD51DRAD51 paralog D [Source:HGNC Symbol;Acc:HGNC:9823]35796-2.058-0.0904No
130FBXL20F-box and leucine rich repeat protein 20 [Source:HGNC Symbol;Acc:HGNC:24679]36758-3.180-0.0765No
131PCGF2polycomb group ring finger 2 [Source:HGNC Symbol;Acc:HGNC:12929]36792-3.257-0.0365No
132STAC2SH3 and cysteine rich domain 2 [Source:HGNC Symbol;Acc:HGNC:23990]36890-3.5520.0054No
Table: GSEA details [plain text format]



Fig 2: CHR17Q12   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CHR17Q12: Random ES distribution   
Gene set null distribution of ES for CHR17Q12