Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetCHR20P11
Enrichment Score (ES)-0.6527708
Normalized Enrichment Score (NES)-1.4201181
Nominal p-value0.002259887
FDR q-value0.5521252
FWER p-Value0.86
Table: GSEA Results Summary



Fig 1: Enrichment plot: CHR20P11   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1SEC23BSEC23 homolog B, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:10702]10201.4590.0125No
2POLR3FRNA polymerase III subunit F [Source:HGNC Symbol;Acc:HGNC:15763]17261.0510.0223No
3NAA20N-alpha-acetyltransferase 20, NatB catalytic subunit [Source:HGNC Symbol;Acc:HGNC:15908]36280.488-0.0157No
4RALGAPA2Ral GTPase activating protein catalytic subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:16207]37040.470-0.0049No
5PPIAP2peptidylprolyl isomerase A pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:16542]41840.383-0.0073No
6MED28P7mediator complex subunit 28 pseudogene 7 [Source:HGNC Symbol;Acc:HGNC:45084]42660.3670.0006No
7EIF4E2P1eukaryotic translation initiation factor 4E family member 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16237]43850.3460.0069No
8CD93CD93 molecule [Source:HGNC Symbol;Acc:HGNC:15855]44710.3320.0137No
9NXT1nuclear transport factor 2 like export factor 1 [Source:HGNC Symbol;Acc:HGNC:15913]47640.2850.0137No
10XRN25'-3' exoribonuclease 2 [Source:HGNC Symbol;Acc:HGNC:12836]57250.134-0.0086No
11EEF1A1P34eukaryotic translation elongation factor 1 alpha 1 pseudogene 34 [Source:HGNC Symbol;Acc:HGNC:37912]61710.067-0.0188No
12LINC01431long intergenic non-protein coding RNA 1431 [Source:HGNC Symbol;Acc:HGNC:50744]69510.000-0.0399No
13LINC01427long intergenic non-protein coding RNA 1427 [Source:HGNC Symbol;Acc:HGNC:50737]69610.000-0.0401No
14LINC01432long intergenic non-protein coding RNA 1432 [Source:HGNC Symbol;Acc:HGNC:50745]70220.000-0.0418No
15RNU2-56PRNA, U2 small nuclear 56, pseudogene [Source:HGNC Symbol;Acc:HGNC:48549]77740.000-0.0621No
16RNU6-192PRNA, U6 small nuclear 192, pseudogene [Source:HGNC Symbol;Acc:HGNC:47155]81350.000-0.0718No
17KIZ-AS1KIZ antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51231]86000.000-0.0844No
18ZNF133zinc finger protein 133 [Source:HGNC Symbol;Acc:HGNC:12917]95610.000-0.1104No
19BSNDP2BSND pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:51537]98730.000-0.1188No
20BSNDP1BSND pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:51536]98750.000-0.1188No
21BSNDP3BSND pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:51538]98780.000-0.1189No
22RN7SL690PRNA, 7SL, cytoplasmic 690, pseudogene [Source:HGNC Symbol;Acc:HGNC:46706]99010.000-0.1194No
23AL133464.1novel transcript101960.000-0.1274No
24CYB5AP4cytochrome b5 type A pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:2575]103120.000-0.1305No
25KRT18P3keratin 18 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:16540]104410.000-0.1340No
26RNU7-137PRNA, U7 small nuclear 137 pseudogene [Source:HGNC Symbol;Acc:HGNC:45671]106060.000-0.1384No
27SCP2D1-AS1SCP2D1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:16210]107450.000-0.1421No
28OVOL2ovo like zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:15804]108840.000-0.1459No
29FAM182Bfamily with sequence similarity 182 member B [Source:HGNC Symbol;Acc:HGNC:34503]109060.000-0.1465No
30FAM182Afamily with sequence similarity 182 member A [Source:HGNC Symbol;Acc:HGNC:16222]109070.000-0.1465No
31GGTLC1gamma-glutamyltransferase light chain 1 [Source:HGNC Symbol;Acc:HGNC:16437]110380.000-0.1500No
32GAPDHP53glyceraldehyde 3 phosphate dehydrogenase pseudogene 53 [Source:HGNC Symbol;Acc:HGNC:38559]110480.000-0.1502No
33SSTR4somatostatin receptor 4 [Source:HGNC Symbol;Acc:HGNC:11333]117850.000-0.1701No
34LNCNEFlncRNA neighboring enhancer of FOXA2 [Source:HGNC Symbol;Acc:HGNC:50656]118890.000-0.1729No
35AL035252.2novel transcript126130.000-0.1925No
36VN1R108Pvomeronasal 1 receptor 108 pseudogene [Source:HGNC Symbol;Acc:HGNC:37432]127250.000-0.1955No
37THBDthrombomodulin [Source:HGNC Symbol;Acc:HGNC:11784]128260.000-0.1982No
38SLC25A6P1solute carrier family 25 member 6 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16554]128990.000-0.2001No
39CST13Pcystatin 13, pseudogene [Source:HGNC Symbol;Acc:HGNC:44335]130990.000-0.2055No
40CST12Pcystatin 12, pseudogene [Source:HGNC Symbol;Acc:HGNC:31920]132670.000-0.2100No
41LINC00261long intergenic non-protein coding RNA 261 [Source:HGNC Symbol;Acc:HGNC:16189]133870.000-0.2133No
42LINC00237long intergenic non-protein coding RNA 237 [Source:HGNC Symbol;Acc:HGNC:38166]134920.000-0.2161No
43VSX1visual system homeobox 1 [Source:HGNC Symbol;Acc:HGNC:12723]147880.000-0.2511No
44PAX1paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]149700.000-0.2560No
45RN7SL607PRNA, 7SL, cytoplasmic 607, pseudogene [Source:HGNC Symbol;Acc:HGNC:46623]154380.000-0.2687No
46ZNF337-AS1ZNF337 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40759]163650.000-0.2937No
47RN7SL594PRNA, 7SL, cytoplasmic 594, pseudogene [Source:HGNC Symbol;Acc:HGNC:46610]164880.000-0.2970No
48RNU6ATAC17PRNA, U6atac small nuclear 17, pseudogene [Source:HGNC Symbol;Acc:HGNC:46916]170810.000-0.3130No
49GSTM3P1glutathione S-transferase mu 3 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16606]171940.000-0.3161No
50SCP2D1SCP2 sterol binding domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16211]172460.000-0.3174No
51RNA5SP477RNA, 5S ribosomal pseudogene 477 [Source:HGNC Symbol;Acc:HGNC:43377]174500.000-0.3229No
52RNA5SP476RNA, 5S ribosomal pseudogene 476 [Source:HGNC Symbol;Acc:HGNC:43376]174510.000-0.3229No
53RNA5SP479RNA, 5S ribosomal pseudogene 479 [Source:HGNC Symbol;Acc:HGNC:43379]174550.000-0.3230No
54RNA5SP478RNA, 5S ribosomal pseudogene 478 [Source:HGNC Symbol;Acc:HGNC:43378]174560.000-0.3230No
55GCNT1P1glucosaminyl (N-acetyl) transferase 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16532]175200.000-0.3247No
56RNU6ATAC34PRNA, U6atac small nuclear 34, pseudogene [Source:HGNC Symbol;Acc:HGNC:46933]175540.000-0.3256No
57CST11cystatin 11 [Source:HGNC Symbol;Acc:HGNC:15959]181760.000-0.3424No
58NKX2-2-AS1NKX2-2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:37154]183020.000-0.3458No
59CSTP2cystatin pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:2487]184830.000-0.3507No
60CSTP1cystatin pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:2486]184840.000-0.3507No
61CSTL1cystatin like 1 [Source:HGNC Symbol;Acc:HGNC:15958]185340.000-0.3520No
62RN7SL14PRNA, 7SL, cytoplasmic 14, pseudogene [Source:HGNC Symbol;Acc:HGNC:46030]186060.000-0.3539No
63CST9Lcystatin 9 like [Source:HGNC Symbol;Acc:HGNC:16233]187660.000-0.3582No
64RN7SKP74RN7SK pseudogene 74 [Source:HGNC Symbol;Acc:HGNC:45798]188110.000-0.3594No
65NKX2-4NK2 homeobox 4 [Source:HGNC Symbol;Acc:HGNC:7837]192250.000-0.3706No
66NKX2-2NK2 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:7835]192270.000-0.3706No
67DUXAP7double homeobox A pseudogene 7 [Source:HGNC Symbol;Acc:HGNC:32186]193320.000-0.3734No
68SMIM26small integral membrane protein 26 [Source:HGNC Symbol;Acc:HGNC:43430]197300.000-0.3842No
69CST2P1cystatin SA pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:45042]197640.000-0.3851No
70LINC01747long intergenic non-protein coding RNA 1747 [Source:HGNC Symbol;Acc:HGNC:52536]198950.000-0.3886No
71LINC01733long intergenic non-protein coding RNA 1733 [Source:HGNC Symbol;Acc:HGNC:52521]199130.000-0.3890No
72LINC01727long intergenic non-protein coding RNA 1727 [Source:HGNC Symbol;Acc:HGNC:52515]199840.000-0.3909No
73LINC01726long intergenic non-protein coding RNA 1726 [Source:HGNC Symbol;Acc:HGNC:52514]199850.000-0.3909No
74LINC01721long intergenic non-protein coding RNA 1721 [Source:HGNC Symbol;Acc:HGNC:52508]199930.000-0.3911No
75LLPHP1LLPH pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:50491]202860.000-0.3990No
76RN7SKP140RN7SK pseudogene 140 [Source:HGNC Symbol;Acc:HGNC:45864]204630.000-0.4038No
77MIR3192microRNA 3192 [Source:HGNC Symbol;Acc:HGNC:38202]213160.000-0.4268No
78INSM1INSM transcriptional repressor 1 [Source:HGNC Symbol;Acc:HGNC:6090]220090.000-0.4456No
79RN7SL638PRNA, 7SL, cytoplasmic 638, pseudogene [Source:HGNC Symbol;Acc:HGNC:46654]220340.000-0.4462No
80SYNDIG1synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]222420.000-0.4518No
81POM121L3PPOM121 transmembrane nucleoporin like 3, pseudogene [Source:HGNC Symbol;Acc:HGNC:16440]222830.000-0.4529No
82SNORD17small nucleolar RNA, C/D box 17 [Source:HGNC Symbol;Acc:HGNC:32713]224400.000-0.4571No
83MIR663AHGMIR663A host gene [Source:HGNC Symbol;Acc:HGNC:27662]225810.000-0.4609No
84ZNF337zinc finger protein 337 [Source:HGNC Symbol;Acc:HGNC:15809]226240.000-0.4621No
85RPL41P1ribosomal protein L41 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:10356]226720.000-0.4633No
86LINC00851long intergenic non-protein coding RNA 851 [Source:HGNC Symbol;Acc:HGNC:43424]233430.000-0.4815No
87CFAP61cilia and flagella associated protein 61 [Source:HGNC Symbol;Acc:HGNC:15872]236010.000-0.4884No
88FOXA2forkhead box A2 [Source:HGNC Symbol;Acc:HGNC:5022]238690.000-0.4956No
89ZNF877Pzinc finger protein 877, pseudogene [Source:HGNC Symbol;Acc:HGNC:38697]240110.000-0.4994No
90CST9cystatin 9 [Source:HGNC Symbol;Acc:HGNC:13261]249260.000-0.5242No
91CST8cystatin 8 [Source:HGNC Symbol;Acc:HGNC:2480]249270.000-0.5242No
92CST5cystatin D [Source:HGNC Symbol;Acc:HGNC:2477]249300.000-0.5242No
93CST4cystatin S [Source:HGNC Symbol;Acc:HGNC:2476]249310.000-0.5242No
94CST3cystatin C [Source:HGNC Symbol;Acc:HGNC:2475]249320.000-0.5242No
95CST2cystatin SA [Source:HGNC Symbol;Acc:HGNC:2474]249330.000-0.5242No
96CST1cystatin SN [Source:HGNC Symbol;Acc:HGNC:2473]249350.000-0.5243No
97LINC00656long intergenic non-protein coding RNA 656 [Source:HGNC Symbol;Acc:HGNC:27304]254010.000-0.5368No
98LINC00652long intergenic non-protein coding RNA 652 [Source:HGNC Symbol;Acc:HGNC:25003]254030.000-0.5369No
99RNU1-23PRNA, U1 small nuclear 23, pseudogene [Source:HGNC Symbol;Acc:HGNC:41964]260200.000-0.5535No
100AL118508.1novel transcript261160.000-0.5561No
101PTMAP3prothymosin alpha pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:9626]262030.000-0.5584No
102CST9LP1cystatin 9-like pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:39552]264560.000-0.5653No
103CST9LP2cystatin 9-like pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:44337]264570.000-0.5653No
104RNU6-1257PRNA, U6 small nuclear 1257, pseudogene [Source:HGNC Symbol;Acc:HGNC:48220]267460.000-0.5731No
105CFTRP1CFTR pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16182]275460.000-0.5947No
106PET117PET117 cytochrome c oxidase chaperone [Source:HGNC Symbol;Acc:HGNC:40045]28164-0.058-0.6098No
107CRNKL1crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]28994-0.170-0.6275No
108RPL15P1ribosomal protein L15 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16583]29928-0.307-0.6443Yes
109RPL24P2ribosomal protein L24 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:16597]30074-0.326-0.6393Yes
110GZF1GDNF inducible zinc finger protein 1 [Source:HGNC Symbol;Acc:HGNC:15808]30088-0.328-0.6306Yes
111MRPS11P1mitochondrial ribosomal protein S11 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16584]30428-0.372-0.6295Yes
112RPS19P1ribosomal protein S19 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16534]30723-0.420-0.6260Yes
113DZANK1double zinc ribbon and ankyrin repeat domains 1 [Source:HGNC Symbol;Acc:HGNC:15858]30910-0.450-0.6186Yes
114KAT14lysine acetyltransferase 14 [Source:HGNC Symbol;Acc:HGNC:15904]31046-0.469-0.6094Yes
115NCOR1P1NCOR1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16724]31057-0.470-0.5968Yes
116RPS15AP1ribosomal protein S15a pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16598]31087-0.475-0.5845Yes
117NAPBNSF attachment protein beta [Source:HGNC Symbol;Acc:HGNC:15751]31529-0.551-0.5813Yes
118NINLninein like [Source:HGNC Symbol;Acc:HGNC:29163]31646-0.569-0.5688Yes
119RPL12P12ribosomal protein L12 pseudogene 12 [Source:HGNC Symbol;Acc:HGNC:15951]32018-0.645-0.5611Yes
120ACSS1acyl-CoA synthetase short chain family member 1 [Source:HGNC Symbol;Acc:HGNC:16091]32083-0.659-0.5447Yes
121RBBP9RB binding protein 9, serine hydrolase [Source:HGNC Symbol;Acc:HGNC:9892]32153-0.671-0.5282Yes
122RPL21P3ribosomal protein L21 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:16533]32341-0.710-0.5137Yes
123APMAPadipocyte plasma membrane associated protein [Source:HGNC Symbol;Acc:HGNC:13238]32436-0.729-0.4962Yes
124RPL17P1ribosomal protein L17 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16559]32503-0.746-0.4775Yes
125SNX5sorting nexin 5 [Source:HGNC Symbol;Acc:HGNC:14969]32749-0.810-0.4619Yes
126ENTPD6ectonucleoside triphosphate diphosphohydrolase 6 [Source:HGNC Symbol;Acc:HGNC:3368]33093-0.895-0.4465Yes
127NANPN-acetylneuraminic acid phosphatase [Source:HGNC Symbol;Acc:HGNC:16140]33321-0.963-0.4262Yes
128CST7cystatin F [Source:HGNC Symbol;Acc:HGNC:2479]33358-0.974-0.4004Yes
129DTD1D-aminoacyl-tRNA deacylase 1 [Source:HGNC Symbol;Acc:HGNC:16219]34117-1.215-0.3875Yes
130SLC24A3solute carrier family 24 member 3 [Source:HGNC Symbol;Acc:HGNC:10977]34773-1.451-0.3654Yes
131MGME1mitochondrial genome maintenance exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:16205]34790-1.456-0.3258Yes
132ABHD12abhydrolase domain containing 12, lysophospholipase [Source:HGNC Symbol;Acc:HGNC:15868]35768-2.036-0.2963Yes
133GINS1GINS complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:28980]36505-2.720-0.2414Yes
134PYGBglycogen phosphorylase B [Source:HGNC Symbol;Acc:HGNC:9723]36591-2.873-0.1648Yes
135RIN2Ras and Rab interactor 2 [Source:HGNC Symbol;Acc:HGNC:18750]36775-3.203-0.0817Yes
136KIZkizuna centrosomal protein [Source:HGNC Symbol;Acc:HGNC:15865]36802-3.2810.0078Yes
Table: GSEA details [plain text format]



Fig 2: CHR20P11   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CHR20P11: Random ES distribution   
Gene set null distribution of ES for CHR20P11