Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_GAQ
GeneSetCHR2Q11
Enrichment Score (ES)0.5057215
Normalized Enrichment Score (NES)1.3311609
Nominal p-value0.009803922
FDR q-value0.39875573
FWER p-Value0.802
Table: GSEA Results Summary



Fig 1: Enrichment plot: CHR2Q11   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1DUSP2dual specificity phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:3068]164.6220.0950Yes
2SEMA4Csemaphorin 4C [Source:HGNC Symbol;Acc:HGNC:10731]244.4660.1870Yes
3ITPRIPL1ITPRIP like 1 [Source:HGNC Symbol;Acc:HGNC:29371]3572.3680.2269Yes
4ARID5AAT-rich interaction domain 5A [Source:HGNC Symbol;Acc:HGNC:17361]3812.2970.2737Yes
5MITD1microtubule interacting and trafficking domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25207]4722.1260.3152Yes
6RNF149ring finger protein 149 [Source:HGNC Symbol;Acc:HGNC:23137]5012.0770.3573Yes
7TMEM127transmembrane protein 127 [Source:HGNC Symbol;Acc:HGNC:26038]7441.7350.3866Yes
8ZNF2zinc finger protein 2 [Source:HGNC Symbol;Acc:HGNC:12991]10091.4660.4097Yes
9TXNDC9thioredoxin domain containing 9 [Source:HGNC Symbol;Acc:HGNC:24110]15961.1180.4169Yes
10HMGN2P22high mobility group nucleosomal binding domain 2 pseudogene 22 [Source:HGNC Symbol;Acc:HGNC:39387]20910.8970.4221Yes
11EIF5Beukaryotic translation initiation factor 5B [Source:HGNC Symbol;Acc:HGNC:30793]21790.8700.4377Yes
12TMEM131transmembrane protein 131 [Source:HGNC Symbol;Acc:HGNC:30366]22570.8410.4530Yes
13SNORD89small nucleolar RNA, C/D box 89 [Source:HGNC Symbol;Acc:HGNC:32750]28560.6650.4505Yes
14PDCL3phosducin like 3 [Source:HGNC Symbol;Acc:HGNC:28860]32730.5660.4510Yes
15BBIP1P1BBSome interacting protein 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:52781]33070.5600.4617Yes
16COA5cytochrome c oxidase assembly factor 5 [Source:HGNC Symbol;Acc:HGNC:33848]34730.5200.4679Yes
17CIAO1cytosolic iron-sulfur assembly component 1 [Source:HGNC Symbol;Acc:HGNC:14280]37160.4680.4710Yes
18MRPS5mitochondrial ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:14498]37630.4590.4793Yes
19AC097374.1pseudogene similar to part of asparagine synthetase (ASNS)38280.4490.4868Yes
20ANKRD39ankyrin repeat domain 39 [Source:HGNC Symbol;Acc:HGNC:28640]39180.4320.4933Yes
21CRACDLCRACD like [Source:HGNC Symbol;Acc:HGNC:33454]39740.4200.5005Yes
22SNX18P14sorting nexin 18 pseudogene 14 [Source:HGNC Symbol;Acc:HGNC:39622]40890.4020.5057Yes
23KANSL3KAT8 regulatory NSL complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25473]44450.3360.5030No
24YWHAQP5YWHAQ pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:37684]49220.2570.4955No
25ACTR1Bactin related protein 1B [Source:HGNC Symbol;Acc:HGNC:168]50380.2350.4972No
26ATP5F1BP1ATP synthase F1 subunit beta pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:831]56110.1450.4847No
27MGAT4Aalpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A [Source:HGNC Symbol;Acc:HGNC:7047]58230.1190.4815No
28LONRF2LON peptidase N-terminal domain and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:24788]73750.0000.4395No
29AC013270.1novel transcript74510.0000.4375No
30ANKRD36ankyrin repeat domain 36 [Source:HGNC Symbol;Acc:HGNC:24079]78920.0000.4256No
31ASTLastacin like metalloendopeptidase [Source:HGNC Symbol;Acc:HGNC:31704]80420.0000.4216No
32PROM2prominin 2 [Source:HGNC Symbol;Acc:HGNC:20685]84820.0000.4097No
33OR7E102Polfactory receptor family 7 subfamily E member 102 pseudogene [Source:HGNC Symbol;Acc:HGNC:15043]85540.0000.4078No
34TBC1D8-AS1TBC1D8 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:52782]89560.0000.3969No
35LINC01104long intergenic non-protein coding RNA 1104 [Source:HGNC Symbol;Acc:HGNC:49226]90960.0000.3932No
36IGKV3OR2-5immunoglobulin kappa variable 3/OR2-5 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5832]92950.0000.3878No
37FER1L5fer-1 like family member 5 [Source:HGNC Symbol;Acc:HGNC:19044]95150.0000.3819No
38TRIM43CPtripartite motif containing 43C, pseudogene [Source:HGNC Symbol;Acc:HGNC:43981]97310.0000.3761No
39IGKV1OR2-6immunoglobulin kappa variable 1/OR2-6 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5770]100890.0000.3664No
40IGKV1OR2-9immunoglobulin kappa variable 1/OR2-9 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5771]100930.0000.3663No
41IGKV1OR2-3immunoglobulin kappa variable 1/OR2-3 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5769]101000.0000.3661No
42FAHD2Bfumarylacetoacetate hydrolase domain containing 2B [Source:HGNC Symbol;Acc:HGNC:25318]105290.0000.3546No
43FAM178Bfamily with sequence similarity 178 member B [Source:HGNC Symbol;Acc:HGNC:28036]106890.0000.3503No
44FABP7P2fatty acid binding protein 7 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:41952]110590.0000.3403No
45ANKRD20A8Pankyrin repeat domain 20 family member A8, pseudogene [Source:HGNC Symbol;Acc:HGNC:23666]111570.0000.3377No
46RNU4-84PRNA, U4 small nuclear 84, pseudogene [Source:HGNC Symbol;Acc:HGNC:47020]113270.0000.3331No
47RNU6-1320PRNA, U6 small nuclear 1320, pseudogene [Source:HGNC Symbol;Acc:HGNC:48283]116530.0000.3243No
48SLC2AXP1solute carrier family 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:31077]117460.0000.3218No
49AFF3AF4/FMR2 family member 3 [Source:HGNC Symbol;Acc:HGNC:6473]117710.0000.3212No
50LINC00342long intergenic non-protein coding RNA 342 [Source:HGNC Symbol;Acc:HGNC:42470]131490.0000.2839No
51MTCO1P48MT-CO1 pseudogene 48 [Source:HGNC Symbol;Acc:HGNC:52113]132630.0000.2808No
52MTCO3P45MT-CO3 pseudogene 45 [Source:HGNC Symbol;Acc:HGNC:52148]142340.0000.2546No
53RFX8RFX family member 8, lacking RFX DNA binding domain [Source:HGNC Symbol;Acc:HGNC:37253]145250.0000.2467No
54RNU7-46PRNA, U7 small nuclear 46 pseudogene [Source:HGNC Symbol;Acc:HGNC:34142]150010.0000.2339No
55TRIM43tripartite motif containing 43 [Source:HGNC Symbol;Acc:HGNC:19015]154620.0000.2215No
56MIR5696microRNA 5696 [Source:HGNC Symbol;Acc:HGNC:43516]155320.0000.2196No
57CNN2P8calponin 2 pseudogene 8 [Source:HGNC Symbol;Acc:HGNC:39533]156010.0000.2177No
58RN7SL575PRNA, 7SL, cytoplasmic 575, pseudogene [Source:HGNC Symbol;Acc:HGNC:46591]158420.0000.2113No
59IL1R1interleukin 1 receptor type 1 [Source:HGNC Symbol;Acc:HGNC:5993]159700.0000.2078No
60IL1R2interleukin 1 receptor type 2 [Source:HGNC Symbol;Acc:HGNC:5994]159710.0000.2078No
61ZAP70zeta chain of T cell receptor associated protein kinase 70 [Source:HGNC Symbol;Acc:HGNC:12858]160990.0000.2044No
62RN7SL313PRNA, 7SL, cytoplasmic 313, pseudogene [Source:HGNC Symbol;Acc:HGNC:46329]163840.0000.1967No
63ADRA2Badrenoceptor alpha 2B [Source:HGNC Symbol;Acc:HGNC:282]165800.0000.1914No
64AL845331.1putative aquaporin-7-like protein 3 [Source:NCBI gene (formerly Entrezgene);Acc:100509620]177470.0000.1599No
65ANKRD36Cankyrin repeat domain 36C [Source:HGNC Symbol;Acc:HGNC:32946]178810.0000.1563No
66ANKRD36Bankyrin repeat domain 36B [Source:HGNC Symbol;Acc:HGNC:29333]178870.0000.1561No
67STARD7-AS1STARD7 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40827]182790.0000.1456No
68IGKV1OR2-11immunoglobulin kappa variable 1/OR2-11 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5768]184390.0000.1413No
69IGKV2OR2-7Dimmunoglobulin kappa variable 2/OR2-7D (pseudogene) [Source:HGNC Symbol;Acc:HGNC:37489]185610.0000.1380No
70IGKV2OR2-10immunoglobulin kappa variable 2/OR2-10 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5806]186080.0000.1367No
71MALmal, T cell differentiation protein [Source:HGNC Symbol;Acc:HGNC:6817]189250.0000.1282No
72RNA5SP101RNA, 5S ribosomal pseudogene 101 [Source:HGNC Symbol;Acc:HGNC:42899]190410.0000.1251No
73NMSneuromedin S [Source:HGNC Symbol;Acc:HGNC:32203]193530.0000.1167No
74NANOGNBP1NANOGNB pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:42158]194210.0000.1149No
75LINC01870long intergenic non-protein coding RNA 1870 [Source:HGNC Symbol;Acc:HGNC:52689]195300.0000.1119No
76LINC01868long intergenic non-protein coding RNA 1868 [Source:HGNC Symbol;Acc:HGNC:52688]195370.0000.1118No
77LINC01849long intergenic non-protein coding RNA 1849 [Source:HGNC Symbol;Acc:HGNC:52665]196370.0000.1091No
78TEKT4tektin 4 [Source:HGNC Symbol;Acc:HGNC:31012]198260.0000.1040No
79GPAT2P2glycerol-3-phosphate acyltransferase 2 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:52331]200180.0000.0988No
80GPAT2P1glycerol-3-phosphate acyltransferase 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:52330]200220.0000.0988No
81RNU7-96PRNA, U7 small nuclear 96 pseudogene [Source:HGNC Symbol;Acc:HGNC:45630]208680.0000.0759No
82MIR3127microRNA 3127 [Source:HGNC Symbol;Acc:HGNC:38269]211740.0000.0676No
83RNU4-8PRNA, U4 small nuclear 8, pseudogene [Source:HGNC Symbol;Acc:HGNC:10195]213890.0000.0618No
84VWA3Bvon Willebrand factor A domain containing 3B [Source:HGNC Symbol;Acc:HGNC:28385]214860.0000.0592No
85C2orf92chromosome 2 open reading frame 92 [Source:HGNC Symbol;Acc:HGNC:49272]215410.0000.0578No
86C2orf15chromosome 2 open reading frame 15 [Source:HGNC Symbol;Acc:HGNC:28436]216680.0000.0544No
87TRIM64FPtripartite motif containing 64F, pseudogene [Source:HGNC Symbol;Acc:HGNC:43976]217840.0000.0513No
88ZNF514zinc finger protein 514 [Source:HGNC Symbol;Acc:HGNC:25894]219890.0000.0457No
89CYP4F32Pcytochrome P450 family 4 subfamily F member 32, pseudogene [Source:HGNC Symbol;Acc:HGNC:39951]229540.0000.0197No
90CREG2cellular repressor of E1A stimulated genes 2 [Source:HGNC Symbol;Acc:HGNC:14272]232050.0000.0129No
91KCNIP3potassium voltage-gated channel interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:15523]240800.000-0.0107No
92UBTFL3UBTF like 3 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:35402]241730.000-0.0132No
93UBTFL6UBTF like 6 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:35406]241760.000-0.0133No
94UBTFL5UBTF like 5 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:35405]241770.000-0.0133No
95RN7SL210PRNA, 7SL, cytoplasmic 210, pseudogene [Source:HGNC Symbol;Acc:HGNC:46226]242350.000-0.0148No
96HMGN1P36high mobility group nucleosome binding domain 1 pseudogene 36 [Source:HGNC Symbol;Acc:HGNC:39380]252120.000-0.0412No
97TRIM43Btripartite motif containing 43B [Source:HGNC Symbol;Acc:HGNC:37146]252330.000-0.0418No
98LYG1lysozyme g1 [Source:HGNC Symbol;Acc:HGNC:27014]255030.000-0.0491No
99LYG2lysozyme g2 [Source:HGNC Symbol;Acc:HGNC:29615]255040.000-0.0491No
100GPAT2glycerol-3-phosphate acyltransferase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:27168]256580.000-0.0532No
101TRIM51JPtripartite motif-containing 51J, pseudogene [Source:HGNC Symbol;Acc:HGNC:43978]263130.000-0.0709No
102CNN2P11calponin 2 pseudogene 11 [Source:HGNC Symbol;Acc:HGNC:39536]271610.000-0.0938No
103IGKV2OR2-2immunoglobulin kappa variable 2/OR2-2 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5808]272270.000-0.0956No
104IGKV2OR2-1immunoglobulin kappa variable 2/OR2-1 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5805]272290.000-0.0956No
105IGKV2OR2-8immunoglobulin kappa variable 2/OR2-8 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5811]272410.000-0.0959No
106IGKV2OR2-7immunoglobulin kappa variable 2/OR2-7 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5810]272420.000-0.0959No
107CNOT11CCR4-NOT transcription complex subunit 11 [Source:HGNC Symbol;Acc:HGNC:25217]28003-0.032-0.1158No
108MRPL30mitochondrial ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:14036]28333-0.082-0.1230No
109CNNM4cyclin and CBS domain divalent metal cation transport mediator 4 [Source:HGNC Symbol;Acc:HGNC:105]28829-0.147-0.1334No
110CNGA3cyclic nucleotide gated channel subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:2150]29186-0.199-0.1389No
111CHST10carbohydrate sulfotransferase 10 [Source:HGNC Symbol;Acc:HGNC:19650]29669-0.267-0.1464No
112TSGA10testis specific 10 [Source:HGNC Symbol;Acc:HGNC:14927]29681-0.269-0.1412No
113RPS24P6ribosomal protein S24 pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:36240]30024-0.320-0.1438No
114COX5Bcytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]30048-0.323-0.1378No
115UNC50unc-50 inner nuclear membrane RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16046]30059-0.324-0.1314No
116ANKRD23ankyrin repeat domain 23 [Source:HGNC Symbol;Acc:HGNC:24470]30101-0.330-0.1257No
117RPL31ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]30489-0.381-0.1283No
118NPAS2neuronal PAS domain protein 2 [Source:HGNC Symbol;Acc:HGNC:7895]30593-0.400-0.1228No
119MAP4K4mitogen-activated protein kinase kinase kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6866]31187-0.492-0.1287No
120SNRNP200small nuclear ribonucleoprotein U5 subunit 200 [Source:HGNC Symbol;Acc:HGNC:30859]31316-0.513-0.1215No
121FAHD2Afumarylacetoacetate hydrolase domain containing 2A [Source:HGNC Symbol;Acc:HGNC:24252]31439-0.533-0.1138No
122LMAN2Llectin, mannose binding 2 like [Source:HGNC Symbol;Acc:HGNC:19263]31866-0.609-0.1128No
123STARD7StAR related lipid transfer domain containing 7 [Source:HGNC Symbol;Acc:HGNC:18063]32258-0.695-0.1090No
124LIPT1lipoyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:29569]33102-0.898-0.1133No
125NEURL3neuralized E3 ubiquitin protein ligase 3 [Source:HGNC Symbol;Acc:HGNC:25162]33359-0.974-0.1001No
126REV1REV1 DNA directed polymerase [Source:HGNC Symbol;Acc:HGNC:14060]34024-1.192-0.0935No
127TBC1D8TBC1 domain family member 8 [Source:HGNC Symbol;Acc:HGNC:17791]34257-1.266-0.0736No
128INPP4Ainositol polyphosphate-4-phosphatase type I A [Source:HGNC Symbol;Acc:HGNC:6074]34444-1.333-0.0511No
129FAHD2CPfumarylacetoacetate hydrolase domain containing 2C, pseudogene [Source:HGNC Symbol;Acc:HGNC:44135]34647-1.410-0.0275No
130NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]36062-2.250-0.0193No
131CNNM3cyclin and CBS domain divalent metal cation transport mediator 3 [Source:HGNC Symbol;Acc:HGNC:104]36103-2.2800.0267No
Table: GSEA details [plain text format]



Fig 2: CHR2Q11   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CHR2Q11: Random ES distribution   
Gene set null distribution of ES for CHR2Q11