Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetCROONQUIST_NRAS_SIGNALING_DN
Enrichment Score (ES)-0.8226935
Normalized Enrichment Score (NES)-1.674777
Nominal p-value0.0
FDR q-value0.0031401755
FWER p-Value0.051
Table: GSEA Results Summary



Fig 1: Enrichment plot: CROONQUIST_NRAS_SIGNALING_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1SBNO2strawberry notch homolog 2 [Source:HGNC Symbol;Acc:HGNC:29158]1263.2780.0241No
2GNAI1G protein subunit alpha i1 [Source:HGNC Symbol;Acc:HGNC:4384]17621.031-0.0114No
3EIF5eukaryotic translation initiation factor 5 [Source:HGNC Symbol;Acc:HGNC:3299]20790.901-0.0124No
4SNRPA1small nuclear ribonucleoprotein polypeptide A' [Source:HGNC Symbol;Acc:HGNC:11152]30070.629-0.0322No
5HMGA1high mobility group AT-hook 1 [Source:HGNC Symbol;Acc:HGNC:5010]32830.564-0.0349No
6APOBEC3Bapolipoprotein B mRNA editing enzyme catalytic subunit 3B [Source:HGNC Symbol;Acc:HGNC:17352]126190.000-0.2870No
7MYRFmyelin regulatory factor [Source:HGNC Symbol;Acc:HGNC:1181]145680.000-0.3396No
8CENPAcentromere protein A [Source:HGNC Symbol;Acc:HGNC:1851]243010.000-0.6025No
9ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]264300.000-0.6600No
10CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]27912-0.021-0.6998No
11PTTG1PTTG1 regulator of sister chromatid separation, securin [Source:HGNC Symbol;Acc:HGNC:9690]28646-0.123-0.7186No
12PLOD2procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 [Source:HGNC Symbol;Acc:HGNC:9082]30655-0.410-0.7694No
13CSE1Lchromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]30914-0.450-0.7726No
14AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]32625-0.776-0.8123No
15CKS1BCDC28 protein kinase regulatory subunit 1B [Source:HGNC Symbol;Acc:HGNC:19083]32783-0.819-0.8096No
16HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]33267-0.949-0.8147Yes
17CCNB1cyclin B1 [Source:HGNC Symbol;Acc:HGNC:1579]33479-1.012-0.8119Yes
18RFC3replication factor C subunit 3 [Source:HGNC Symbol;Acc:HGNC:9971]33690-1.077-0.8086Yes
19PLK4polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]33697-1.078-0.7997Yes
20TPX2TPX2 microtubule nucleation factor [Source:HGNC Symbol;Acc:HGNC:1249]33713-1.082-0.7911Yes
21PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]33721-1.084-0.7821Yes
22CHEK1checkpoint kinase 1 [Source:HGNC Symbol;Acc:HGNC:1925]33838-1.126-0.7758Yes
23TRIP13thyroid hormone receptor interactor 13 [Source:HGNC Symbol;Acc:HGNC:12307]33877-1.138-0.7673Yes
24TRAIPTRAF interacting protein [Source:HGNC Symbol;Acc:HGNC:30764]34108-1.212-0.7634Yes
25CDC25Ccell division cycle 25C [Source:HGNC Symbol;Acc:HGNC:1727]34490-1.349-0.7624Yes
26BRD8bromodomain containing 8 [Source:HGNC Symbol;Acc:HGNC:19874]34513-1.359-0.7516Yes
27MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]34522-1.361-0.7404Yes
28CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]34533-1.364-0.7292Yes
29DUTdeoxyuridine triphosphatase [Source:HGNC Symbol;Acc:HGNC:3078]34584-1.386-0.7189Yes
30MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]34655-1.411-0.7090Yes
31PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]34665-1.416-0.6974Yes
32POLD3DNA polymerase delta 3, accessory subunit [Source:HGNC Symbol;Acc:HGNC:20932]34705-1.428-0.6864Yes
33KIF2Ckinesin family member 2C [Source:HGNC Symbol;Acc:HGNC:6393]34826-1.475-0.6773Yes
34PLK1polo like kinase 1 [Source:HGNC Symbol;Acc:HGNC:9077]34860-1.492-0.6657Yes
35SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]34896-1.510-0.6540Yes
36NASPnuclear autoantigenic sperm protein [Source:HGNC Symbol;Acc:HGNC:7644]35131-1.642-0.6465Yes
37SPAG5sperm associated antigen 5 [Source:HGNC Symbol;Acc:HGNC:13452]35207-1.677-0.6345Yes
38UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]35315-1.737-0.6228Yes
39SPC25SPC25 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:24031]35454-1.811-0.6113Yes
40CHAF1Achromatin assembly factor 1 subunit A [Source:HGNC Symbol;Acc:HGNC:1910]35484-1.828-0.5968Yes
41SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]35493-1.831-0.5817Yes
42BUB1BBUB1 mitotic checkpoint serine/threonine kinase B [Source:HGNC Symbol;Acc:HGNC:1149]35645-1.933-0.5695Yes
43CDKN3cyclin dependent kinase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:1791]35659-1.943-0.5536Yes
44CDC6cell division cycle 6 [Source:HGNC Symbol;Acc:HGNC:1744]35748-2.016-0.5391Yes
45RAD51CRAD51 paralog C [Source:HGNC Symbol;Acc:HGNC:9820]35799-2.059-0.5231Yes
46MCM2minichromosome maintenance complex component 2 [Source:HGNC Symbol;Acc:HGNC:6944]35912-2.142-0.5082Yes
47KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]35930-2.153-0.4906Yes
48MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]35935-2.155-0.4727Yes
49TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]35959-2.181-0.4550Yes
50STILSTIL centriolar assembly protein [Source:HGNC Symbol;Acc:HGNC:10879]35983-2.196-0.4372Yes
51GALEUDP-galactose-4-epimerase [Source:HGNC Symbol;Acc:HGNC:4116]35988-2.197-0.4189Yes
52NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]36062-2.250-0.4020Yes
53CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]36081-2.263-0.3835Yes
54KIF22kinesin family member 22 [Source:HGNC Symbol;Acc:HGNC:6391]36186-2.355-0.3666Yes
55STMN1stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]36191-2.357-0.3469Yes
56CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36232-2.394-0.3279Yes
57AURKBaurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]36286-2.451-0.3088Yes
58PTP4A3protein tyrosine phosphatase 4A3 [Source:HGNC Symbol;Acc:HGNC:9636]36321-2.496-0.2888Yes
59WEE1WEE1 G2 checkpoint kinase [Source:HGNC Symbol;Acc:HGNC:12761]36455-2.653-0.2701Yes
60H2AXH2A.X variant histone [Source:HGNC Symbol;Acc:HGNC:4739]36470-2.674-0.2481Yes
61GINS1GINS complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:28980]36505-2.720-0.2262Yes
62MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]36546-2.789-0.2039Yes
63NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36620-2.903-0.1815Yes
64MYBL2MYB proto-oncogene like 2 [Source:HGNC Symbol;Acc:HGNC:7548]36643-2.941-0.1575Yes
65POLD1DNA polymerase delta 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9175]36649-2.950-0.1329Yes
66FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]36696-3.045-0.1086Yes
67GPX4glutathione peroxidase 4 [Source:HGNC Symbol;Acc:HGNC:4556]36733-3.106-0.0835Yes
68OIP5Opa interacting protein 5 [Source:HGNC Symbol;Acc:HGNC:20300]36858-3.461-0.0578Yes
69CHEK2checkpoint kinase 2 [Source:HGNC Symbol;Acc:HGNC:16627]36870-3.488-0.0289Yes
70TK1thymidine kinase 1 [Source:HGNC Symbol;Acc:HGNC:11830]37029-4.1530.0016Yes
Table: GSEA details [plain text format]



Fig 2: CROONQUIST_NRAS_SIGNALING_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CROONQUIST_NRAS_SIGNALING_DN: Random ES distribution   
Gene set null distribution of ES for CROONQUIST_NRAS_SIGNALING_DN