Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetMORI_IMMATURE_B_LYMPHOCYTE_DN
Enrichment Score (ES)-0.8095299
Normalized Enrichment Score (NES)-1.6983801
Nominal p-value0.0
FDR q-value0.0016585741
FWER p-Value0.021
Table: GSEA Results Summary



Fig 1: Enrichment plot: MORI_IMMATURE_B_LYMPHOCYTE_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1TXNthioredoxin [Source:HGNC Symbol;Acc:HGNC:12435]17421.042-0.0392No
2HMGN2high mobility group nucleosomal binding domain 2 [Source:HGNC Symbol;Acc:HGNC:4986]19090.973-0.0363No
3HNRNPABheterogeneous nuclear ribonucleoprotein A/B [Source:HGNC Symbol;Acc:HGNC:5034]20490.918-0.0332No
4PREPprolyl endopeptidase [Source:HGNC Symbol;Acc:HGNC:9358]35830.496-0.0709No
5CDKN1Acyclin dependent kinase inhibitor 1A [Source:HGNC Symbol;Acc:HGNC:1784]37220.467-0.0711No
6MTHFD2methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase [Source:HGNC Symbol;Acc:HGNC:7434]44390.337-0.0879No
7SMARCA4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]52890.194-0.1093No
8SMARCA5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:HGNC Symbol;Acc:HGNC:11101]58550.113-0.1238No
9H2AC4H2A clustered histone 4 [Source:HGNC Symbol;Acc:HGNC:4734]60250.087-0.1277No
10HAUS3HAUS augmin like complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:28719]60840.083-0.1286No
11RAG1recombination activating 1 [Source:HGNC Symbol;Acc:HGNC:9831]126650.000-0.3064No
12CDCA5cell division cycle associated 5 [Source:HGNC Symbol;Acc:HGNC:14626]167750.000-0.4175No
13IGLL1immunoglobulin lambda like polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:5870]184770.000-0.4635No
14RAMP1receptor activity modifying protein 1 [Source:HGNC Symbol;Acc:HGNC:9843]203650.000-0.5145No
15CENPAcentromere protein A [Source:HGNC Symbol;Acc:HGNC:1851]243010.000-0.6208No
16CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]27912-0.021-0.7182No
17ENPEPglutamyl aminopeptidase [Source:HGNC Symbol;Acc:HGNC:3355]28082-0.044-0.7225No
18SLC16A1solute carrier family 16 member 1 [Source:HGNC Symbol;Acc:HGNC:10922]28501-0.103-0.7330No
19CBX1chromobox 1 [Source:HGNC Symbol;Acc:HGNC:1551]28853-0.150-0.7413No
20ANP32Eacidic nuclear phosphoprotein 32 family member E [Source:HGNC Symbol;Acc:HGNC:16673]28974-0.167-0.7433No
21SLBPstem-loop binding protein [Source:HGNC Symbol;Acc:HGNC:10904]30070-0.326-0.7704No
22HJURPHolliday junction recognition protein [Source:HGNC Symbol;Acc:HGNC:25444]30352-0.363-0.7753No
23ACTN4actinin alpha 4 [Source:HGNC Symbol;Acc:HGNC:166]30879-0.446-0.7861No
24TUBB4Btubulin beta 4B class IVb [Source:HGNC Symbol;Acc:HGNC:20771]31056-0.470-0.7874No
25DCKdeoxycytidine kinase [Source:HGNC Symbol;Acc:HGNC:2704]31121-0.480-0.7855No
26MCM10minichromosome maintenance 10 replication initiation factor [Source:HGNC Symbol;Acc:HGNC:18043]31158-0.486-0.7828No
27UCK2uridine-cytidine kinase 2 [Source:HGNC Symbol;Acc:HGNC:12562]31199-0.495-0.7801No
28PRDX4peroxiredoxin 4 [Source:HGNC Symbol;Acc:HGNC:17169]31269-0.505-0.7782No
29HMGB1high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]31772-0.593-0.7872No
30KPNA2karyopherin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6395]32085-0.659-0.7907No
31CKS1BCDC28 protein kinase regulatory subunit 1B [Source:HGNC Symbol;Acc:HGNC:19083]32783-0.819-0.8033Yes
32HNRNPA3heterogeneous nuclear ribonucleoprotein A3 [Source:HGNC Symbol;Acc:HGNC:24941]32819-0.827-0.7980Yes
33LMNB1lamin B1 [Source:HGNC Symbol;Acc:HGNC:6637]32854-0.836-0.7926Yes
34HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]33267-0.949-0.7966Yes
35XRCC6X-ray repair cross complementing 6 [Source:HGNC Symbol;Acc:HGNC:4055]33316-0.961-0.7906Yes
36RBBP4RB binding protein 4, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:9887]33360-0.974-0.7844Yes
37CCNB1cyclin B1 [Source:HGNC Symbol;Acc:HGNC:1579]33479-1.012-0.7800Yes
38PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]33721-1.084-0.7783Yes
39CENPLcentromere protein L [Source:HGNC Symbol;Acc:HGNC:17879]33808-1.114-0.7722Yes
40CHEK1checkpoint kinase 1 [Source:HGNC Symbol;Acc:HGNC:1925]33838-1.126-0.7645Yes
41PCK2phosphoenolpyruvate carboxykinase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:8725]33972-1.176-0.7592Yes
42TUBA1Btubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]34314-1.283-0.7587Yes
43CKAP5cytoskeleton associated protein 5 [Source:HGNC Symbol;Acc:HGNC:28959]34435-1.328-0.7519Yes
44MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]34522-1.361-0.7440Yes
45CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]34533-1.364-0.7339Yes
46TUBA1Atubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]34562-1.376-0.7243Yes
47CDCA7cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]34637-1.405-0.7157Yes
48DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]34894-1.508-0.7112Yes
49SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]34896-1.510-0.6998Yes
50KIFC1kinesin family member C1 [Source:HGNC Symbol;Acc:HGNC:6389]34899-1.514-0.6884Yes
51LGALS1galectin 1 [Source:HGNC Symbol;Acc:HGNC:6561]34905-1.518-0.6771Yes
52CDC45cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]35304-1.732-0.6748Yes
53UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]35315-1.737-0.6619Yes
54RAD51RAD51 recombinase [Source:HGNC Symbol;Acc:HGNC:9817]35417-1.787-0.6512Yes
55RRM1ribonucleotide reductase catalytic subunit M1 [Source:HGNC Symbol;Acc:HGNC:10451]35455-1.811-0.6385Yes
56SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]35493-1.831-0.6256Yes
57PRIM1DNA primase subunit 1 [Source:HGNC Symbol;Acc:HGNC:9369]35508-1.842-0.6121Yes
58PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]35527-1.854-0.5986Yes
59CDKN3cyclin dependent kinase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:1791]35659-1.943-0.5874Yes
60EZH2enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]35732-2.004-0.5743Yes
61RAD54LRAD54 like [Source:HGNC Symbol;Acc:HGNC:9826]35882-2.115-0.5623Yes
62MCM2minichromosome maintenance complex component 2 [Source:HGNC Symbol;Acc:HGNC:6944]35912-2.142-0.5469Yes
63MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]35935-2.155-0.5312Yes
64TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]35959-2.181-0.5154Yes
65TMPOthymopoietin [Source:HGNC Symbol;Acc:HGNC:11875]35963-2.182-0.4989Yes
66TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]35968-2.186-0.4825Yes
67MCM6minichromosome maintenance complex component 6 [Source:HGNC Symbol;Acc:HGNC:6949]36012-2.211-0.4670Yes
68TUBBtubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]36040-2.235-0.4509Yes
69NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]36062-2.250-0.4344Yes
70IQGAP3IQ motif containing GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:20669]36078-2.261-0.4177Yes
71CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]36081-2.263-0.4007Yes
72HMGB3high mobility group box 3 [Source:HGNC Symbol;Acc:HGNC:5004]36099-2.278-0.3840Yes
73STMN1stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]36191-2.357-0.3686Yes
74CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36232-2.394-0.3516Yes
75MELKmaternal embryonic leucine zipper kinase [Source:HGNC Symbol;Acc:HGNC:16870]36289-2.458-0.3345Yes
76NEK2NIMA related kinase 2 [Source:HGNC Symbol;Acc:HGNC:7745]36304-2.474-0.3162Yes
77SLC29A1solute carrier family 29 member 1 (Augustine blood group) [Source:HGNC Symbol;Acc:HGNC:11003]36380-2.561-0.2989Yes
78H2AXH2A.X variant histone [Source:HGNC Symbol;Acc:HGNC:4739]36470-2.674-0.2811Yes
79MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]36546-2.789-0.2621Yes
80NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]36555-2.800-0.2411Yes
81CDCA3cell division cycle associated 3 [Source:HGNC Symbol;Acc:HGNC:14624]36562-2.813-0.2201Yes
82PTGR1prostaglandin reductase 1 [Source:HGNC Symbol;Acc:HGNC:18429]36600-2.879-0.1993Yes
83GSNgelsolin [Source:HGNC Symbol;Acc:HGNC:4620]36609-2.892-0.1777Yes
84NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36620-2.903-0.1560Yes
85E2F8E2F transcription factor 8 [Source:HGNC Symbol;Acc:HGNC:24727]36622-2.908-0.1341Yes
86LIG1DNA ligase 1 [Source:HGNC Symbol;Acc:HGNC:6598]36627-2.912-0.1122Yes
87CDKN2Ccyclin dependent kinase inhibitor 2C [Source:HGNC Symbol;Acc:HGNC:1789]36629-2.914-0.0902Yes
88RRM2ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]36679-3.000-0.0689Yes
89DNMT1DNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:2976]36757-3.180-0.0469Yes
90DTLdenticleless E3 ubiquitin protein ligase homolog [Source:HGNC Symbol;Acc:HGNC:30288]36872-3.490-0.0236Yes
91H2AZ2H2A.Z variant histone 2 [Source:HGNC Symbol;Acc:HGNC:20664]36988-3.9040.0028Yes
Table: GSEA details [plain text format]



Fig 2: MORI_IMMATURE_B_LYMPHOCYTE_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: MORI_IMMATURE_B_LYMPHOCYTE_DN: Random ES distribution   
Gene set null distribution of ES for MORI_IMMATURE_B_LYMPHOCYTE_DN