Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_GAQ
GeneSetNAGASHIMA_EGF_SIGNALING_UP
Enrichment Score (ES)0.82688993
Normalized Enrichment Score (NES)1.90686
Nominal p-value0.0
FDR q-value0.0022193596
FWER p-Value0.023
Table: GSEA Results Summary



Fig 1: Enrichment plot: NAGASHIMA_EGF_SIGNALING_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1FOSL1FOS like 1, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:13718]154.6780.0477Yes
2DUSP2dual specificity phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:3068]164.6220.0952Yes
3MYCMYC proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7553]184.5780.1422Yes
4ID1inhibitor of DNA binding 1, HLH protein [Source:HGNC Symbol;Acc:HGNC:5360]274.4390.1876Yes
5ZFP36ZFP36 ring finger protein [Source:HGNC Symbol;Acc:HGNC:12862]294.4170.2330Yes
6TRIB1tribbles pseudokinase 1 [Source:HGNC Symbol;Acc:HGNC:16891]484.1240.2749Yes
7ID3inhibitor of DNA binding 3, HLH protein [Source:HGNC Symbol;Acc:HGNC:5362]753.7370.3126Yes
8EDN1endothelin 1 [Source:HGNC Symbol;Acc:HGNC:3176]763.7350.3510Yes
9KDM6Blysine demethylase 6B [Source:HGNC Symbol;Acc:HGNC:29012]943.5340.3869Yes
10IER3immediate early response 3 [Source:HGNC Symbol;Acc:HGNC:5392]1023.4370.4220Yes
11JUNBJunB proto-oncogene, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:6205]1163.3630.4562Yes
12ARCactivity regulated cytoskeleton associated protein [Source:HGNC Symbol;Acc:HGNC:648]1593.1210.4872Yes
13ETS2ETS proto-oncogene 2, transcription factor [Source:HGNC Symbol;Acc:HGNC:3489]1623.1150.5191Yes
14DUSP5dual specificity phosphatase 5 [Source:HGNC Symbol;Acc:HGNC:3071]1882.9680.5489Yes
15DUSP1dual specificity phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:3064]2112.8700.5779Yes
16SOWAHCsosondowah ankyrin repeat domain family member C [Source:HGNC Symbol;Acc:HGNC:26149]2282.8060.6063Yes
17NR4A3nuclear receptor subfamily 4 group A member 3 [Source:HGNC Symbol;Acc:HGNC:7982]2732.6590.6324Yes
18NR4A1nuclear receptor subfamily 4 group A member 1 [Source:HGNC Symbol;Acc:HGNC:7980]3412.4010.6553Yes
19RYBPRING1 and YY1 binding protein [Source:HGNC Symbol;Acc:HGNC:10480]4392.1800.6751Yes
20AENapoptosis enhancing nuclease [Source:HGNC Symbol;Acc:HGNC:25722]4852.1090.6955Yes
21EGR3early growth response 3 [Source:HGNC Symbol;Acc:HGNC:3240]5931.9320.7125Yes
22NAB2NGFI-A binding protein 2 [Source:HGNC Symbol;Acc:HGNC:7627]6621.8340.7295Yes
23IER2immediate early response 2 [Source:HGNC Symbol;Acc:HGNC:28871]6771.8240.7479Yes
24FOSBFosB proto-oncogene, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:3797]6881.8110.7662Yes
25LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]7111.7790.7839Yes
26ATF3activating transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:785]7641.7120.8001Yes
27MAFFMAF bZIP transcription factor F [Source:HGNC Symbol;Acc:HGNC:6780]9281.5350.8115Yes
28NR4A2nuclear receptor subfamily 4 group A member 2 [Source:HGNC Symbol;Acc:HGNC:7981]10741.4140.8221Yes
29SIK1salt inducible kinase 1 [Source:HGNC Symbol;Acc:HGNC:11142]17381.0440.8149Yes
30PLEKHO2pleckstrin homology domain containing O2 [Source:HGNC Symbol;Acc:HGNC:30026]21020.8940.8143Yes
31TNFRSF12ATNF receptor superfamily member 12A [Source:HGNC Symbol;Acc:HGNC:18152]24580.7780.8127Yes
32KBTBD2kelch repeat and BTB domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21751]27680.6900.8115Yes
33MIR22HGMIR22 host gene [Source:HGNC Symbol;Acc:HGNC:28219]27870.6850.8180Yes
34EGR1early growth response 1 [Source:HGNC Symbol;Acc:HGNC:3238]30360.6220.8177Yes
35JUNJun proto-oncogene, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:6204]31440.5960.8210Yes
36BCL10BCL10 immune signaling adaptor [Source:HGNC Symbol;Acc:HGNC:989]31520.5950.8269Yes
37HBEGFheparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059]44740.3320.7946No
38TNFRSF11BTNF receptor superfamily member 11b [Source:HGNC Symbol;Acc:HGNC:11909]46520.3040.7930No
39TIPARPTCDD inducible poly(ADP-ribose) polymerase [Source:HGNC Symbol;Acc:HGNC:23696]47060.2950.7946No
40KLF6Kruppel like factor 6 [Source:HGNC Symbol;Acc:HGNC:2235]52740.1960.7813No
41MCL1MCL1 apoptosis regulator, BCL2 family member [Source:HGNC Symbol;Acc:HGNC:6943]59240.1020.7648No
42DNAJB1DnaJ heat shock protein family (Hsp40) member B1 [Source:HGNC Symbol;Acc:HGNC:5270]59420.0990.7654No
43CCN2cellular communication network factor 2 [Source:HGNC Symbol;Acc:HGNC:2500]60400.0870.7636No
44FOSFos proto-oncogene, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:3796]60780.0830.7635No
45HES1hes family bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:5192]74150.0000.7274No
46AREGamphiregulin [Source:HGNC Symbol;Acc:HGNC:651]75130.0000.7248No
47DLX2distal-less homeobox 2 [Source:HGNC Symbol;Acc:HGNC:2915]168360.0000.4731No
48F2RL1F2R like trypsin receptor 1 [Source:HGNC Symbol;Acc:HGNC:3538]212860.0000.3530No
49EGR4early growth response 4 [Source:HGNC Symbol;Acc:HGNC:3241]223940.0000.3231No
50CCN1cellular communication network factor 1 [Source:HGNC Symbol;Acc:HGNC:2654]231000.0000.3040No
51EPHA2EPH receptor A2 [Source:HGNC Symbol;Acc:HGNC:3386]28126-0.0520.1689No
52NAP1L1nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]29462-0.2390.1353No
53NEDD9neural precursor cell expressed, developmentally down-regulated 9 [Source:HGNC Symbol;Acc:HGNC:7733]29527-0.2450.1361No
54GEMGTP binding protein overexpressed in skeletal muscle [Source:HGNC Symbol;Acc:HGNC:4234]29835-0.2940.1308No
55SPRED2sprouty related EVH1 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:17722]33888-1.1420.0331No
56BHLHE40basic helix-loop-helix family member e40 [Source:HGNC Symbol;Acc:HGNC:1046]35081-1.6170.0176No
57KLF10Kruppel like factor 10 [Source:HGNC Symbol;Acc:HGNC:11810]36897-3.5660.0052No
Table: GSEA details [plain text format]



Fig 2: NAGASHIMA_EGF_SIGNALING_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: NAGASHIMA_EGF_SIGNALING_UP: Random ES distribution   
Gene set null distribution of ES for NAGASHIMA_EGF_SIGNALING_UP