Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_GAQ
GeneSetREACTOME_INTERFERON_ALPHA_BETA_SIGNALING
Enrichment Score (ES)0.7943799
Normalized Enrichment Score (NES)1.9436823
Nominal p-value0.0
FDR q-value9.275816E-4
FWER p-Value0.006
Table: GSEA Results Summary



Fig 1: Enrichment plot: REACTOME_INTERFERON_ALPHA_BETA_SIGNALING   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1SOCS3suppressor of cytokine signaling 3 [Source:HGNC Symbol;Acc:HGNC:19391]134.7400.0707Yes
2USP18ubiquitin specific peptidase 18 [Source:HGNC Symbol;Acc:HGNC:12616]683.8160.1264Yes
3IFI35interferon induced protein 35 [Source:HGNC Symbol;Acc:HGNC:5399]1143.3710.1757Yes
4OAS12'-5'-oligoadenylate synthetase 1 [Source:HGNC Symbol;Acc:HGNC:8086]1343.2250.2235Yes
5IRF7interferon regulatory factor 7 [Source:HGNC Symbol;Acc:HGNC:6122]2622.6880.2604Yes
6OAS22'-5'-oligoadenylate synthetase 2 [Source:HGNC Symbol;Acc:HGNC:8087]3302.4460.2952Yes
7IFITM3interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]3492.3750.3303Yes
8OAS32'-5'-oligoadenylate synthetase 3 [Source:HGNC Symbol;Acc:HGNC:8088]3722.3180.3645Yes
9SOCS1suppressor of cytokine signaling 1 [Source:HGNC Symbol;Acc:HGNC:19383]3732.3090.3991Yes
10OASL2'-5'-oligoadenylate synthetase like [Source:HGNC Symbol;Acc:HGNC:8090]3742.3080.4336Yes
11STAT2signal transducer and activator of transcription 2 [Source:HGNC Symbol;Acc:HGNC:11363]4062.2520.4666Yes
12STAT1signal transducer and activator of transcription 1 [Source:HGNC Symbol;Acc:HGNC:11362]4542.1490.4975Yes
13ADARadenosine deaminase RNA specific [Source:HGNC Symbol;Acc:HGNC:225]4582.1420.5295Yes
14RSAD2radical S-adenosyl methionine domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30908]4982.0810.5596Yes
15IFITM2interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]6061.9090.5853Yes
16MX1MX dynamin like GTPase 1 [Source:HGNC Symbol;Acc:HGNC:7532]6351.8630.6125Yes
17ISG20interferon stimulated exonuclease gene 20 [Source:HGNC Symbol;Acc:HGNC:6130]6411.8570.6402Yes
18MX2MX dynamin like GTPase 2 [Source:HGNC Symbol;Acc:HGNC:7533]6471.8460.6677Yes
19IRF9interferon regulatory factor 9 [Source:HGNC Symbol;Acc:HGNC:6131]6681.8330.6947Yes
20IRF8interferon regulatory factor 8 [Source:HGNC Symbol;Acc:HGNC:5358]9461.5200.7100Yes
21PTPN11protein tyrosine phosphatase non-receptor type 11 [Source:HGNC Symbol;Acc:HGNC:9644]9621.5060.7321Yes
22IP6K2inositol hexakisphosphate kinase 2 [Source:HGNC Symbol;Acc:HGNC:17313]11101.3900.7490Yes
23IFIT1interferon induced protein with tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:5407]13961.2080.7594Yes
24GBP2guanylate binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4183]14371.1860.7761Yes
25IFIT2interferon induced protein with tetratricopeptide repeats 2 [Source:HGNC Symbol;Acc:HGNC:5409]16331.0950.7872Yes
26PTPN1protein tyrosine phosphatase non-receptor type 1 [Source:HGNC Symbol;Acc:HGNC:9642]19230.9660.7939Yes
27HLA-Bmajor histocompatibility complex, class I, B [Source:HGNC Symbol;Acc:HGNC:4932]25310.7520.7888Yes
28EGR1early growth response 1 [Source:HGNC Symbol;Acc:HGNC:3238]30360.6220.7845Yes
29IRF6interferon regulatory factor 6 [Source:HGNC Symbol;Acc:HGNC:6121]30380.6220.7938Yes
30PSMB8proteasome 20S subunit beta 8 [Source:HGNC Symbol;Acc:HGNC:9545]36880.4740.7833Yes
31IRF5interferon regulatory factor 5 [Source:HGNC Symbol;Acc:HGNC:6120]39090.4340.7839Yes
32ABCE1ATP binding cassette subfamily E member 1 [Source:HGNC Symbol;Acc:HGNC:69]39590.4250.7889Yes
33IRF4interferon regulatory factor 4 [Source:HGNC Symbol;Acc:HGNC:6119]40480.4070.7927Yes
34KPNA1karyopherin subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:6394]42250.3750.7935Yes
35HLA-Fmajor histocompatibility complex, class I, F [Source:HGNC Symbol;Acc:HGNC:4963]43860.3460.7944Yes
36HLA-Emajor histocompatibility complex, class I, E [Source:HGNC Symbol;Acc:HGNC:4962]46940.2980.7906No
37JAK1Janus kinase 1 [Source:HGNC Symbol;Acc:HGNC:6190]47840.2810.7924No
38IFIT3interferon induced protein with tetratricopeptide repeats 3 [Source:HGNC Symbol;Acc:HGNC:5411]51570.2120.7855No
39KPNB1karyopherin subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:6400]54100.1760.7813No
40HLA-Amajor histocompatibility complex, class I, A [Source:HGNC Symbol;Acc:HGNC:4931]59030.1060.7696No
41HLA-Cmajor histocompatibility complex, class I, C [Source:HGNC Symbol;Acc:HGNC:4933]61460.0710.7641No
42BST2bone marrow stromal cell antigen 2 [Source:HGNC Symbol;Acc:HGNC:1119]126080.0000.5896No
43IFNA13interferon alpha 13 [Source:HGNC Symbol;Acc:HGNC:5419]182160.0000.4381No
44IFNA14interferon alpha 14 [Source:HGNC Symbol;Acc:HGNC:5420]182170.0000.4381No
45IFNA16interferon alpha 16 [Source:HGNC Symbol;Acc:HGNC:5421]182190.0000.4381No
46IFNA17interferon alpha 17 [Source:HGNC Symbol;Acc:HGNC:5422]182210.0000.4381No
47IFNA10interferon alpha 10 [Source:HGNC Symbol;Acc:HGNC:5418]182280.0000.4379No
48IFNA21interferon alpha 21 [Source:HGNC Symbol;Acc:HGNC:5424]182350.0000.4378No
49IFNAR2interferon alpha and beta receptor subunit 2 [Source:HGNC Symbol;Acc:HGNC:5433]184970.0000.4307No
50IFNAR1interferon alpha and beta receptor subunit 1 [Source:HGNC Symbol;Acc:HGNC:5432]185050.0000.4305No
51IFI6interferon alpha inducible protein 6 [Source:HGNC Symbol;Acc:HGNC:4054]207300.0000.3704No
52ISG15ISG15 ubiquitin like modifier [Source:HGNC Symbol;Acc:HGNC:4053]232620.0000.3021No
53IFIT5interferon induced protein with tetratricopeptide repeats 5 [Source:HGNC Symbol;Acc:HGNC:13328]234550.0000.2969No
54IFNA5interferon alpha 5 [Source:HGNC Symbol;Acc:HGNC:5426]248970.0000.2580No
55IFNA4interferon alpha 4 [Source:HGNC Symbol;Acc:HGNC:5425]248980.0000.2580No
56IFNA7interferon alpha 7 [Source:HGNC Symbol;Acc:HGNC:5428]249000.0000.2579No
57IFNA6interferon alpha 6 [Source:HGNC Symbol;Acc:HGNC:5427]249010.0000.2579No
58IFNA1interferon alpha 1 [Source:HGNC Symbol;Acc:HGNC:5417]249020.0000.2579No
59IFNA2interferon alpha 2 [Source:HGNC Symbol;Acc:HGNC:5423]249030.0000.2579No
60IFNA8interferon alpha 8 [Source:HGNC Symbol;Acc:HGNC:5429]249060.0000.2579No
61IFNB1interferon beta 1 [Source:HGNC Symbol;Acc:HGNC:5434]249360.0000.2571No
62XAF1XIAP associated factor 1 [Source:HGNC Symbol;Acc:HGNC:30932]275390.0000.1868No
63IRF3interferon regulatory factor 3 [Source:HGNC Symbol;Acc:HGNC:6118]28146-0.0550.1713No
64SAMHD1SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 [Source:HGNC Symbol;Acc:HGNC:15925]28821-0.1460.1552No
65IFITM1interferon induced transmembrane protein 1 [Source:HGNC Symbol;Acc:HGNC:5412]29283-0.2130.1460No
66IRF1interferon regulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:6116]29766-0.2850.1372No
67HLA-Hmajor histocompatibility complex, class I, H (pseudogene) [Source:HGNC Symbol;Acc:HGNC:4965]30341-0.3610.1271No
68IFI27interferon alpha inducible protein 27 [Source:HGNC Symbol;Acc:HGNC:5397]30371-0.3650.1318No
69HLA-Gmajor histocompatibility complex, class I, G [Source:HGNC Symbol;Acc:HGNC:4964]30483-0.3790.1345No
70PTPN6protein tyrosine phosphatase non-receptor type 6 [Source:HGNC Symbol;Acc:HGNC:9658]31450-0.5350.1164No
71TYK2tyrosine kinase 2 [Source:HGNC Symbol;Acc:HGNC:12440]32274-0.6980.1047No
72IRF2interferon regulatory factor 2 [Source:HGNC Symbol;Acc:HGNC:6117]32740-0.8090.1042No
73RNASELribonuclease L [Source:HGNC Symbol;Acc:HGNC:10050]33050-0.8850.1091No
Table: GSEA details [plain text format]



Fig 2: REACTOME_INTERFERON_ALPHA_BETA_SIGNALING   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: REACTOME_INTERFERON_ALPHA_BETA_SIGNALING: Random ES distribution   
Gene set null distribution of ES for REACTOME_INTERFERON_ALPHA_BETA_SIGNALING