Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetWHITEFORD_PEDIATRIC_CANCER_MARKERS
Enrichment Score (ES)-0.76787245
Normalized Enrichment Score (NES)-1.6643858
Nominal p-value0.0
FDR q-value0.003459336
FWER p-Value0.071
Table: GSEA Results Summary



Fig 1: Enrichment plot: WHITEFORD_PEDIATRIC_CANCER_MARKERS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1ODC1ornithine decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:8109]613.9850.0217No
2BCAT1branched chain amino acid transaminase 1 [Source:HGNC Symbol;Acc:HGNC:976]2772.6480.0314No
3NME1NME/NM23 nucleoside diphosphate kinase 1 [Source:HGNC Symbol;Acc:HGNC:7849]5731.9610.0350No
4CKS2CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:2000]15041.1540.0166No
5MLLT11MLLT11 transcription factor 7 cofactor [Source:HGNC Symbol;Acc:HGNC:16997]21380.8840.0047No
6CDK6cyclin dependent kinase 6 [Source:HGNC Symbol;Acc:HGNC:1777]22990.8280.0052No
7CDC25Acell division cycle 25A [Source:HGNC Symbol;Acc:HGNC:1725]32220.578-0.0164No
8EIF4A1eukaryotic translation initiation factor 4A1 [Source:HGNC Symbol;Acc:HGNC:3282]39320.429-0.0330No
9CCNT1cyclin T1 [Source:HGNC Symbol;Acc:HGNC:1599]39830.419-0.0319No
10TMEFF1transmembrane protein with EGF like and two follistatin like domains 1 [Source:HGNC Symbol;Acc:HGNC:11866]41490.392-0.0341No
11ILF2interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]44340.339-0.0398No
12EIF4EBP1eukaryotic translation initiation factor 4E binding protein 1 [Source:HGNC Symbol;Acc:HGNC:3288]45110.325-0.0399No
13MFN2mitofusin 2 [Source:HGNC Symbol;Acc:HGNC:16877]46410.305-0.0416No
14GPX7glutathione peroxidase 7 [Source:HGNC Symbol;Acc:HGNC:4559]96680.000-0.1776No
15H4C3H4 clustered histone 3 [Source:HGNC Symbol;Acc:HGNC:4787]103370.000-0.1956No
16KLKB1kallikrein B1 [Source:HGNC Symbol;Acc:HGNC:6371]112950.000-0.2215No
17CDCA5cell division cycle associated 5 [Source:HGNC Symbol;Acc:HGNC:14626]167750.000-0.3697No
18TWIST1twist family bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:12428]172920.000-0.3836No
19GABRB2gamma-aminobutyric acid type A receptor subunit beta2 [Source:HGNC Symbol;Acc:HGNC:4082]199530.000-0.4556No
20SNORD22small nucleolar RNA, C/D box 22 [Source:HGNC Symbol;Acc:HGNC:10145]224750.000-0.5238No
21CENPAcentromere protein A [Source:HGNC Symbol;Acc:HGNC:1851]243010.000-0.5731No
22SOX4SRY-box transcription factor 4 [Source:HGNC Symbol;Acc:HGNC:11200]264100.000-0.6301No
23ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]264300.000-0.6307No
24CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]27912-0.021-0.6706No
25DHFRdihydrofolate reductase [Source:HGNC Symbol;Acc:HGNC:2861]27938-0.026-0.6711No
26JPT1Jupiter microtubule associated homolog 1 [Source:HGNC Symbol;Acc:HGNC:14569]28159-0.057-0.6767No
27ZNF300zinc finger protein 300 [Source:HGNC Symbol;Acc:HGNC:13091]28416-0.091-0.6831No
28PTTG1PTTG1 regulator of sister chromatid separation, securin [Source:HGNC Symbol;Acc:HGNC:9690]28646-0.123-0.6886No
29POLQDNA polymerase theta [Source:HGNC Symbol;Acc:HGNC:9186]28779-0.141-0.6913No
30ZMYM2zinc finger MYM-type containing 2 [Source:HGNC Symbol;Acc:HGNC:12989]28986-0.169-0.6959No
31GGHgamma-glutamyl hydrolase [Source:HGNC Symbol;Acc:HGNC:4248]29206-0.201-0.7006No
32ENO1enolase 1 [Source:HGNC Symbol;Acc:HGNC:3350]29354-0.225-0.7033No
33ADGRL3adhesion G protein-coupled receptor L3 [Source:HGNC Symbol;Acc:HGNC:20974]29776-0.286-0.7130No
34RRP1ribosomal RNA processing 1 [Source:HGNC Symbol;Acc:HGNC:18785]30008-0.318-0.7174No
35ILF3interleukin enhancer binding factor 3 [Source:HGNC Symbol;Acc:HGNC:6038]30768-0.428-0.7354No
36SNRNP200small nuclear ribonucleoprotein U5 subunit 200 [Source:HGNC Symbol;Acc:HGNC:30859]31316-0.513-0.7472No
37RCC2regulator of chromosome condensation 2 [Source:HGNC Symbol;Acc:HGNC:30297]31493-0.544-0.7488No
38PSAT1phosphoserine aminotransferase 1 [Source:HGNC Symbol;Acc:HGNC:19129]32025-0.646-0.7593No
39KPNA2karyopherin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6395]32085-0.659-0.7571No
40NSD2nuclear receptor binding SET domain protein 2 [Source:HGNC Symbol;Acc:HGNC:12766]32214-0.686-0.7565No
41AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]32625-0.776-0.7630Yes
42TYMSthymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]32700-0.796-0.7604Yes
43CKS1BCDC28 protein kinase regulatory subunit 1B [Source:HGNC Symbol;Acc:HGNC:19083]32783-0.819-0.7578Yes
44LMNB2lamin B2 [Source:HGNC Symbol;Acc:HGNC:6638]33031-0.881-0.7593Yes
45MND1meiotic nuclear divisions 1 [Source:HGNC Symbol;Acc:HGNC:24839]33349-0.972-0.7622Yes
46CCNB1cyclin B1 [Source:HGNC Symbol;Acc:HGNC:1579]33479-1.012-0.7597Yes
47RFC3replication factor C subunit 3 [Source:HGNC Symbol;Acc:HGNC:9971]33690-1.077-0.7591Yes
48PLK4polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]33697-1.078-0.7529Yes
49TPX2TPX2 microtubule nucleation factor [Source:HGNC Symbol;Acc:HGNC:1249]33713-1.082-0.7470Yes
50PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]33721-1.084-0.7408Yes
51DTYMKdeoxythymidylate kinase [Source:HGNC Symbol;Acc:HGNC:3061]33914-1.155-0.7392Yes
52MAD2L1mitotic arrest deficient 2 like 1 [Source:HGNC Symbol;Acc:HGNC:6763]33947-1.167-0.7333Yes
53ZNF367zinc finger protein 367 [Source:HGNC Symbol;Acc:HGNC:18320]34053-1.200-0.7291Yes
54GAPDHglyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]34158-1.229-0.7247Yes
55CDK4cyclin dependent kinase 4 [Source:HGNC Symbol;Acc:HGNC:1773]34451-1.336-0.7247Yes
56TUBA1Atubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]34562-1.376-0.7196Yes
57ADCY3adenylate cyclase 3 [Source:HGNC Symbol;Acc:HGNC:234]34598-1.390-0.7124Yes
58CDCA7cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]34637-1.405-0.7052Yes
59MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]34655-1.411-0.6974Yes
60NUDT1nudix hydrolase 1 [Source:HGNC Symbol;Acc:HGNC:8048]34724-1.434-0.6908Yes
61DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]34894-1.508-0.6865Yes
62SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]34896-1.510-0.6777Yes
63PBKPDZ binding kinase [Source:HGNC Symbol;Acc:HGNC:18282]34952-1.544-0.6701Yes
64RNASEH2Aribonuclease H2 subunit A [Source:HGNC Symbol;Acc:HGNC:18518]35022-1.580-0.6627Yes
65NASPnuclear autoantigenic sperm protein [Source:HGNC Symbol;Acc:HGNC:7644]35131-1.642-0.6560Yes
66CENPEcentromere protein E [Source:HGNC Symbol;Acc:HGNC:1856]35165-1.659-0.6472Yes
67CDCA8cell division cycle associated 8 [Source:HGNC Symbol;Acc:HGNC:14629]35266-1.714-0.6398Yes
68ASF1Banti-silencing function 1B histone chaperone [Source:HGNC Symbol;Acc:HGNC:20996]35303-1.732-0.6306Yes
69CDC45cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]35304-1.732-0.6205Yes
70UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]35315-1.737-0.6106Yes
71PON3paraoxonase 3 [Source:HGNC Symbol;Acc:HGNC:9206]35370-1.762-0.6017Yes
72CCDC34coiled-coil domain containing 34 [Source:HGNC Symbol;Acc:HGNC:25079]35451-1.809-0.5932Yes
73PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]35527-1.854-0.5844Yes
74RECQL4RecQ like helicase 4 [Source:HGNC Symbol;Acc:HGNC:9949]35599-1.907-0.5751Yes
75CDCA2cell division cycle associated 2 [Source:HGNC Symbol;Acc:HGNC:14623]35638-1.929-0.5648Yes
76CENPNcentromere protein N [Source:HGNC Symbol;Acc:HGNC:30873]35643-1.931-0.5536Yes
77MEX3Bmex-3 RNA binding family member B [Source:HGNC Symbol;Acc:HGNC:25297]35721-1.994-0.5440Yes
78UBE2Tubiquitin conjugating enzyme E2 T [Source:HGNC Symbol;Acc:HGNC:25009]35736-2.006-0.5326Yes
79MCM5minichromosome maintenance complex component 5 [Source:HGNC Symbol;Acc:HGNC:6948]35755-2.023-0.5212Yes
80HAUS1HAUS augmin like complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:25174]35756-2.023-0.5094Yes
81CENPUcentromere protein U [Source:HGNC Symbol;Acc:HGNC:21348]35816-2.070-0.4988Yes
82POLE2DNA polymerase epsilon 2, accessory subunit [Source:HGNC Symbol;Acc:HGNC:9178]35868-2.107-0.4879Yes
83DBF4DBF4 zinc finger [Source:HGNC Symbol;Acc:HGNC:17364]35886-2.120-0.4759Yes
84BIRC5baculoviral IAP repeat containing 5 [Source:HGNC Symbol;Acc:HGNC:593]35889-2.122-0.4635Yes
85UHRF1ubiquitin like with PHD and ring finger domains 1 [Source:HGNC Symbol;Acc:HGNC:12556]35897-2.126-0.4512Yes
86GINS2GINS complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24575]35922-2.150-0.4392Yes
87KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]35930-2.153-0.4268Yes
88MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]35935-2.155-0.4143Yes
89TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]35959-2.181-0.4021Yes
90TMPOthymopoietin [Source:HGNC Symbol;Acc:HGNC:11875]35963-2.182-0.3894Yes
91TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]35968-2.186-0.3767Yes
92RFC4replication factor C subunit 4 [Source:HGNC Symbol;Acc:HGNC:9972]36015-2.212-0.3649Yes
93CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]36049-2.239-0.3527Yes
94NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]36062-2.250-0.3398Yes
95CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]36081-2.263-0.3270Yes
96HMGB3high mobility group box 3 [Source:HGNC Symbol;Acc:HGNC:5004]36099-2.278-0.3141Yes
97STMN1stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]36191-2.357-0.3028Yes
98MYCNMYCN proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7559]36198-2.363-0.2891Yes
99CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36232-2.394-0.2759Yes
100KIF14kinesin family member 14 [Source:HGNC Symbol;Acc:HGNC:19181]36238-2.399-0.2620Yes
101BUB1BUB1 mitotic checkpoint serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1148]36249-2.411-0.2481Yes
102CKAP2cytoskeleton associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1990]36277-2.444-0.2345Yes
103MELKmaternal embryonic leucine zipper kinase [Source:HGNC Symbol;Acc:HGNC:16870]36289-2.458-0.2204Yes
104NEK2NIMA related kinase 2 [Source:HGNC Symbol;Acc:HGNC:7745]36304-2.474-0.2063Yes
105NUF2NUF2 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:14621]36360-2.539-0.1928Yes
106ATAD2ATPase family AAA domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30123]36387-2.570-0.1785Yes
107ESPL1extra spindle pole bodies like 1, separase [Source:HGNC Symbol;Acc:HGNC:16856]36438-2.629-0.1644Yes
108H2AXH2A.X variant histone [Source:HGNC Symbol;Acc:HGNC:4739]36470-2.674-0.1496Yes
109MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]36546-2.789-0.1352Yes
110NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]36555-2.800-0.1190Yes
111MYBL2MYB proto-oncogene like 2 [Source:HGNC Symbol;Acc:HGNC:7548]36643-2.941-0.1041Yes
112RRM2ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]36679-3.000-0.0875Yes
113PAFAH1B3platelet activating factor acetylhydrolase 1b catalytic subunit 3 [Source:HGNC Symbol;Acc:HGNC:8576]36709-3.062-0.0703Yes
114SLC25A40solute carrier family 25 member 40 [Source:HGNC Symbol;Acc:HGNC:29680]36748-3.155-0.0528Yes
115DNMT1DNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:2976]36757-3.180-0.0344Yes
116E2F1E2F transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:3113]36787-3.234-0.0162Yes
117TK1thymidine kinase 1 [Source:HGNC Symbol;Acc:HGNC:11830]37029-4.1530.0016Yes
Table: GSEA details [plain text format]



Fig 2: WHITEFORD_PEDIATRIC_CANCER_MARKERS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: WHITEFORD_PEDIATRIC_CANCER_MARKERS: Random ES distribution   
Gene set null distribution of ES for WHITEFORD_PEDIATRIC_CANCER_MARKERS