Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetWU_APOPTOSIS_BY_CDKN1A_VIA_TP53
Enrichment Score (ES)-0.84066105
Normalized Enrichment Score (NES)-1.6675588
Nominal p-value0.0
FDR q-value0.0035788803
FWER p-Value0.065
Table: GSEA Results Summary



Fig 1: Enrichment plot: WU_APOPTOSIS_BY_CDKN1A_VIA_TP53   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1HNRNPA2B1heterogeneous nuclear ribonucleoprotein A2/B1 [Source:HGNC Symbol;Acc:HGNC:5033]17771.023-0.0348No
2CDKN1Acyclin dependent kinase inhibitor 1A [Source:HGNC Symbol;Acc:HGNC:1784]37220.467-0.0813No
3NPM1nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]51030.222-0.1157No
4P4HA1prolyl 4-hydroxylase subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:8546]57540.129-0.1316No
5TRIM44tripartite motif containing 44 [Source:HGNC Symbol;Acc:HGNC:19016]59930.090-0.1368No
6ZNF84zinc finger protein 84 [Source:HGNC Symbol;Acc:HGNC:13159]71090.000-0.1669No
7FAT2FAT atypical cadherin 2 [Source:HGNC Symbol;Acc:HGNC:3596]82460.000-0.1976No
8SERPINI2serpin family I member 2 [Source:HGNC Symbol;Acc:HGNC:8945]178290.000-0.4563No
9CCN1cellular communication network factor 1 [Source:HGNC Symbol;Acc:HGNC:2654]231000.000-0.5986No
10CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]27912-0.021-0.7282No
11HMGB1P5high mobility group box 1 pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:4997]29569-0.252-0.7697No
12VEGFAvascular endothelial growth factor A [Source:HGNC Symbol;Acc:HGNC:12680]30658-0.411-0.7938No
13TCN2transcobalamin 2 [Source:HGNC Symbol;Acc:HGNC:11653]31125-0.480-0.8002No
14AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]32625-0.776-0.8307Yes
15TYMSthymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]32700-0.796-0.8224Yes
16BIRC2baculoviral IAP repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:590]32757-0.814-0.8135Yes
17HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]33267-0.949-0.8150Yes
18PARP2poly(ADP-ribose) polymerase 2 [Source:HGNC Symbol;Acc:HGNC:272]33340-0.969-0.8045Yes
19CCNB1cyclin B1 [Source:HGNC Symbol;Acc:HGNC:1579]33479-1.012-0.7952Yes
20TPX2TPX2 microtubule nucleation factor [Source:HGNC Symbol;Acc:HGNC:1249]33713-1.082-0.7875Yes
21MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]34522-1.361-0.7918Yes
22KNTC1kinetochore associated 1 [Source:HGNC Symbol;Acc:HGNC:17255]34524-1.362-0.7743Yes
23TUBA1Atubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]34562-1.376-0.7576Yes
24MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]34655-1.411-0.7419Yes
25ZBTB5zinc finger and BTB domain containing 5 [Source:HGNC Symbol;Acc:HGNC:23836]34797-1.460-0.7270Yes
26DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]34894-1.508-0.7102Yes
27PBKPDZ binding kinase [Source:HGNC Symbol;Acc:HGNC:18282]34952-1.544-0.6918Yes
28TUBB3tubulin beta 3 class III [Source:HGNC Symbol;Acc:HGNC:20772]34958-1.547-0.6721Yes
29FANCIFA complementation group I [Source:HGNC Symbol;Acc:HGNC:25568]35012-1.573-0.6533Yes
30SPDL1spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]35028-1.585-0.6333Yes
31TUBB4Atubulin beta 4A class IVa [Source:HGNC Symbol;Acc:HGNC:20774]35203-1.676-0.6164Yes
32UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]35315-1.737-0.5970Yes
33RRM1ribonucleotide reductase catalytic subunit M1 [Source:HGNC Symbol;Acc:HGNC:10451]35455-1.811-0.5775Yes
34SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]35493-1.831-0.5549Yes
35PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]35527-1.854-0.5320Yes
36UBE2Tubiquitin conjugating enzyme E2 T [Source:HGNC Symbol;Acc:HGNC:25009]35736-2.006-0.5118Yes
37NCAPD3non-SMC condensin II complex subunit D3 [Source:HGNC Symbol;Acc:HGNC:28952]35822-2.072-0.4874Yes
38MCM2minichromosome maintenance complex component 2 [Source:HGNC Symbol;Acc:HGNC:6944]35912-2.142-0.4622Yes
39MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]35935-2.155-0.4351Yes
40TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]35968-2.186-0.4078Yes
41MCM6minichromosome maintenance complex component 6 [Source:HGNC Symbol;Acc:HGNC:6949]36012-2.211-0.3805Yes
42NCAPGnon-SMC condensin I complex subunit G [Source:HGNC Symbol;Acc:HGNC:24304]36024-2.225-0.3522Yes
43ANLNanillin actin binding protein [Source:HGNC Symbol;Acc:HGNC:14082]36095-2.274-0.3248Yes
44EXO1exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]36172-2.347-0.2967Yes
45BUB1BUB1 mitotic checkpoint serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1148]36249-2.411-0.2677Yes
46AURKBaurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]36286-2.451-0.2371Yes
47RACGAP1Rac GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9804]36326-2.499-0.2060Yes
48ATAD2ATPase family AAA domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30123]36387-2.570-0.1746Yes
49CEP55centrosomal protein 55 [Source:HGNC Symbol;Acc:HGNC:1161]36433-2.620-0.1421Yes
50CDC25Bcell division cycle 25B [Source:HGNC Symbol;Acc:HGNC:1726]36454-2.651-0.1085Yes
51MIS18BP1MIS18 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:20190]36694-3.042-0.0758Yes
52ASPMassembly factor for spindle microtubules [Source:HGNC Symbol;Acc:HGNC:19048]36747-3.148-0.0367Yes
53WDHD1WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23170]36899-3.5710.0052Yes
Table: GSEA details [plain text format]



Fig 2: WU_APOPTOSIS_BY_CDKN1A_VIA_TP53   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: WU_APOPTOSIS_BY_CDKN1A_VIA_TP53: Random ES distribution   
Gene set null distribution of ES for WU_APOPTOSIS_BY_CDKN1A_VIA_TP53