Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_GAQ
GeneSetGGGNNTTTCC_NFKB_Q6_01
Enrichment Score (ES)0.48031014
Normalized Enrichment Score (NES)1.2685095
Nominal p-value0.028301887
FDR q-value1.0
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: GGGNNTTTCC_NFKB_Q6_01   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IL1RNinterleukin 1 receptor antagonist [Source:HGNC Symbol;Acc:HGNC:6000]34.9210.0387Yes
2CCL5C-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10632]44.8870.0772Yes
3TNFRSF1BTNF receptor superfamily member 1B [Source:HGNC Symbol;Acc:HGNC:11917]174.6150.1132Yes
4BCL3BCL3 transcription coactivator [Source:HGNC Symbol;Acc:HGNC:998]324.4020.1475Yes
5BCL6BBCL6B transcription repressor [Source:HGNC Symbol;Acc:HGNC:1002]544.0520.1788Yes
6TNIP1TNFAIP3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16903]993.4870.2051Yes
7RELREL proto-oncogene, NF-kB subunit [Source:HGNC Symbol;Acc:HGNC:9954]1183.3530.2310Yes
8NFKBIANFKB inhibitor alpha [Source:HGNC Symbol;Acc:HGNC:7797]1223.3230.2571Yes
9EHD1EH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:3242]2712.6600.2740Yes
10CCND2cyclin D2 [Source:HGNC Symbol;Acc:HGNC:1583]3482.3770.2907Yes
11NFKB2nuclear factor kappa B subunit 2 [Source:HGNC Symbol;Acc:HGNC:7795]3852.2910.3078Yes
12RYBPRING1 and YY1 binding protein [Source:HGNC Symbol;Acc:HGNC:10480]4392.1800.3235Yes
13FHL3four and a half LIM domains 3 [Source:HGNC Symbol;Acc:HGNC:3704]5422.0140.3366Yes
14RAP2CRAP2C, member of RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21165]5761.9570.3511Yes
15PTGESprostaglandin E synthase [Source:HGNC Symbol;Acc:HGNC:9599]6081.9070.3653Yes
16CCDC80coiled-coil domain containing 80 [Source:HGNC Symbol;Acc:HGNC:30649]6821.8200.3777Yes
17SH2B3SH2B adaptor protein 3 [Source:HGNC Symbol;Acc:HGNC:29605]7781.6930.3884Yes
18PFN1profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]7811.6860.4016Yes
19CPEB4cytoplasmic polyadenylation element binding protein 4 [Source:HGNC Symbol;Acc:HGNC:21747]8751.5800.4116Yes
20IPO4importin 4 [Source:HGNC Symbol;Acc:HGNC:19426]9591.5080.4212Yes
21ORAI1ORAI calcium release-activated calcium modulator 1 [Source:HGNC Symbol;Acc:HGNC:25896]10261.4540.4309Yes
22BATFbasic leucine zipper ATF-like transcription factor [Source:HGNC Symbol;Acc:HGNC:958]11011.3940.4398Yes
23ZFAND3zinc finger AN1-type containing 3 [Source:HGNC Symbol;Acc:HGNC:18019]12691.2900.4455Yes
24IER5immediate early response 5 [Source:HGNC Symbol;Acc:HGNC:5393]15021.1550.4483Yes
25E2F3E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]18121.0120.4479Yes
26GDPD5glycerophosphodiester phosphodiesterase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:28804]18640.9920.4543Yes
27TPM3tropomyosin 3 [Source:HGNC Symbol;Acc:HGNC:12012]21400.8830.4538Yes
28LASP1LIM and SH3 protein 1 [Source:HGNC Symbol;Acc:HGNC:6513]21740.8710.4598Yes
29TFECtranscription factor EC [Source:HGNC Symbol;Acc:HGNC:11754]22330.8500.4649Yes
30WNT10AWnt family member 10A [Source:HGNC Symbol;Acc:HGNC:13829]23880.7940.4670Yes
31UBE2Mubiquitin conjugating enzyme E2 M [Source:HGNC Symbol;Acc:HGNC:12491]24100.7890.4727Yes
32MT2Ametallothionein 2A [Source:HGNC Symbol;Acc:HGNC:7406]26130.7290.4729Yes
33RSPRY1ring finger and SPRY domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29420]28580.6650.4716Yes
34MYADMmyeloid associated differentiation marker [Source:HGNC Symbol;Acc:HGNC:7544]29910.6320.4730Yes
35RBMS1RNA binding motif single stranded interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9907]29930.6320.4779Yes
36TNFSF15TNF superfamily member 15 [Source:HGNC Symbol;Acc:HGNC:11931]31910.5860.4772Yes
37ETV1ETS variant transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:3490]32440.5720.4803Yes
38UPF2UPF2 regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:17854]35200.5080.4769No
39IL6interleukin 6 [Source:HGNC Symbol;Acc:HGNC:6018]35630.5000.4797No
40FUT7fucosyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4018]43660.3490.4607No
41SLAMF8SLAM family member 8 [Source:HGNC Symbol;Acc:HGNC:21391]44990.3270.4597No
42KYkyphoscoliosis peptidase [Source:HGNC Symbol;Acc:HGNC:26576]46070.3100.4593No
43G3BP1G3BP stress granule assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:30292]47980.2780.4563No
44CDC27cell division cycle 27 [Source:HGNC Symbol;Acc:HGNC:1728]49240.2570.4550No
45BIRC3baculoviral IAP repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:591]50080.2420.4546No
46SMPD3sphingomyelin phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:14240]50130.2410.4564No
47LTBlymphotoxin beta [Source:HGNC Symbol;Acc:HGNC:6711]52500.2010.4516No
48ENTHD1ENTH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26352]55750.1500.4440No
49N4BP1NEDD4 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:29850]58420.1160.4377No
50CXCR5C-X-C motif chemokine receptor 5 [Source:HGNC Symbol;Acc:HGNC:1060]59800.0920.4347No
51WRAP53WD repeat containing antisense to TP53 [Source:HGNC Symbol;Acc:HGNC:25522]60830.0830.4326No
52MAML2mastermind like transcriptional coactivator 2 [Source:HGNC Symbol;Acc:HGNC:16259]65090.0090.4212No
53GREM1gremlin 1, DAN family BMP antagonist [Source:HGNC Symbol;Acc:HGNC:2001]84490.0000.3687No
54POU2F3POU class 2 homeobox 3 [Source:HGNC Symbol;Acc:HGNC:19864]86330.0000.3638No
55DCLK1doublecortin like kinase 1 [Source:HGNC Symbol;Acc:HGNC:2700]88750.0000.3573No
56PRR34PRR34 long non-coding RNA [Source:HGNC Symbol;Acc:HGNC:25606]90590.0000.3523No
57MADCAM1mucosal vascular addressin cell adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:6765]93150.0000.3454No
58TNFRSF9TNF receptor superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11924]99760.0000.3276No
59KCNS3potassium voltage-gated channel modifier subfamily S member 3 [Source:HGNC Symbol;Acc:HGNC:6302]100870.0000.3246No
60HSPG2heparan sulfate proteoglycan 2 [Source:HGNC Symbol;Acc:HGNC:5273]104920.0000.3136No
61IL1RAPL1interleukin 1 receptor accessory protein like 1 [Source:HGNC Symbol;Acc:HGNC:5996]105780.0000.3113No
62NRIP2nuclear receptor interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:23078]109840.0000.3004No
63NTRK3neurotrophic receptor tyrosine kinase 3 [Source:HGNC Symbol;Acc:HGNC:8033]111080.0000.2971No
64CNTFciliary neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:2169]124970.0000.2595No
65SP6Sp6 transcription factor [Source:HGNC Symbol;Acc:HGNC:14530]125240.0000.2588No
66MSX1msh homeobox 1 [Source:HGNC Symbol;Acc:HGNC:7391]126460.0000.2555No
67UBDubiquitin D [Source:HGNC Symbol;Acc:HGNC:18795]129360.0000.2477No
68GATA4GATA binding protein 4 [Source:HGNC Symbol;Acc:HGNC:4173]136780.0000.2277No
69PLXNB1plexin B1 [Source:HGNC Symbol;Acc:HGNC:9103]142150.0000.2132No
70TLX1T cell leukemia homeobox 1 [Source:HGNC Symbol;Acc:HGNC:5056]144670.0000.2064No
71PCSK2proprotein convertase subtilisin/kexin type 2 [Source:HGNC Symbol;Acc:HGNC:8744]163280.0000.1560No
72GPR182G protein-coupled receptor 182 [Source:HGNC Symbol;Acc:HGNC:13708]164520.0000.1527No
73IL2interleukin 2 [Source:HGNC Symbol;Acc:HGNC:6001]177680.0000.1171No
74LPOlactoperoxidase [Source:HGNC Symbol;Acc:HGNC:6678]187150.0000.0915No
75MSCmusculin [Source:HGNC Symbol;Acc:HGNC:7321]190790.0000.0817No
76BNC2basonuclin 2 [Source:HGNC Symbol;Acc:HGNC:30988]192920.0000.0760No
77NR2F2nuclear receptor subfamily 2 group F member 2 [Source:HGNC Symbol;Acc:HGNC:7976]195840.0000.0681No
78ZNF532zinc finger protein 532 [Source:HGNC Symbol;Acc:HGNC:30940]219580.0000.0039No
79CD70CD70 molecule [Source:HGNC Symbol;Acc:HGNC:11937]232210.000-0.0303No
80C1QL1complement C1q like 1 [Source:HGNC Symbol;Acc:HGNC:24182]234360.000-0.0361No
81FOXS1forkhead box S1 [Source:HGNC Symbol;Acc:HGNC:3735]236400.000-0.0416No
82SLC25A18solute carrier family 25 member 18 [Source:HGNC Symbol;Acc:HGNC:10988]237670.000-0.0450No
83LAMA1laminin subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:6481]239320.000-0.0494No
84NRGNneurogranin [Source:HGNC Symbol;Acc:HGNC:8000]243670.000-0.0611No
85FTHL17ferritin heavy chain like 17 [Source:HGNC Symbol;Acc:HGNC:3987]246220.000-0.0680No
86FGF1fibroblast growth factor 1 [Source:HGNC Symbol;Acc:HGNC:3665]256620.000-0.0961No
87SOX5SRY-box transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:11201]264110.000-0.1164No
88CD86CD86 molecule [Source:HGNC Symbol;Acc:HGNC:1705]28229-0.068-0.1650No
89STAT6signal transducer and activator of transcription 6 [Source:HGNC Symbol;Acc:HGNC:11368]28266-0.073-0.1654No
90PPP2R5Eprotein phosphatase 2 regulatory subunit B'epsilon [Source:HGNC Symbol;Acc:HGNC:9313]28527-0.106-0.1716No
91RASSF2Ras association domain family member 2 [Source:HGNC Symbol;Acc:HGNC:9883]28790-0.143-0.1776No
92TNKS1BP1tankyrase 1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:19081]29211-0.202-0.1873No
93CCR10C-C motif chemokine receptor 10 [Source:HGNC Symbol;Acc:HGNC:4474]29525-0.245-0.1939No
94GEMGTP binding protein overexpressed in skeletal muscle [Source:HGNC Symbol;Acc:HGNC:4234]29835-0.294-0.1999No
95ARID1AAT-rich interaction domain 1A [Source:HGNC Symbol;Acc:HGNC:11110]30413-0.370-0.2126No
96BMP2KBMP2 inducible kinase [Source:HGNC Symbol;Acc:HGNC:18041]30493-0.382-0.2117No
97SH3KBP1SH3 domain containing kinase binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13867]30613-0.404-0.2118No
98TCEA2transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614]30759-0.426-0.2123No
99ENO3enolase 3 [Source:HGNC Symbol;Acc:HGNC:3354]31272-0.506-0.2222No
100PSME3IP1proteasome activator subunit 3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29856]31627-0.566-0.2273No
101CREB1cAMP responsive element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2345]31635-0.567-0.2231No
102NFAT5nuclear factor of activated T cells 5 [Source:HGNC Symbol;Acc:HGNC:7774]32010-0.643-0.2281No
103CSF2RBcolony stimulating factor 2 receptor subunit beta [Source:HGNC Symbol;Acc:HGNC:2436]32767-0.816-0.2422No
104CNIH2cornichon family AMPA receptor auxiliary protein 2 [Source:HGNC Symbol;Acc:HGNC:28744]32821-0.827-0.2371No
105UBE2Hubiquitin conjugating enzyme E2 H [Source:HGNC Symbol;Acc:HGNC:12484]32853-0.836-0.2313No
106CHD6chromodomain helicase DNA binding protein 6 [Source:HGNC Symbol;Acc:HGNC:19057]32922-0.853-0.2265No
107MIDEASmitotic deacetylase associated SANT domain protein [Source:HGNC Symbol;Acc:HGNC:19853]33237-0.943-0.2275No
108ALG6ALG6 alpha-1,3-glucosyltransferase [Source:HGNC Symbol;Acc:HGNC:23157]33354-0.973-0.2230No
109SLC12A2solute carrier family 12 member 2 [Source:HGNC Symbol;Acc:HGNC:10911]33366-0.976-0.2156No
110PNKDPNKD metallo-beta-lactamase domain containing [Source:HGNC Symbol;Acc:HGNC:9153]33670-1.071-0.2154No
111PKN1protein kinase N1 [Source:HGNC Symbol;Acc:HGNC:9405]33776-1.103-0.2095No
112SLC6A12solute carrier family 6 member 12 [Source:HGNC Symbol;Acc:HGNC:11045]33870-1.135-0.2031No
113RPS6KA4ribosomal protein S6 kinase A4 [Source:HGNC Symbol;Acc:HGNC:10433]33906-1.153-0.1950No
114STX4syntaxin 4 [Source:HGNC Symbol;Acc:HGNC:11439]33908-1.153-0.1859No
115KAT7lysine acetyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:17016]33997-1.185-0.1790No
116TP53tumor protein p53 [Source:HGNC Symbol;Acc:HGNC:11998]34112-1.214-0.1725No
117CNTNAP1contactin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:8011]34205-1.247-0.1652No
118RELBRELB proto-oncogene, NF-kB subunit [Source:HGNC Symbol;Acc:HGNC:9956]34378-1.310-0.1595No
119CCDC107coiled-coil domain containing 107 [Source:HGNC Symbol;Acc:HGNC:28465]34388-1.315-0.1494No
120HOXA4homeobox A4 [Source:HGNC Symbol;Acc:HGNC:5105]34441-1.332-0.1403No
121TUBA1Atubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]34562-1.376-0.1327No
122ENKD1enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]34624-1.401-0.1233No
123SLC44A1solute carrier family 44 member 1 [Source:HGNC Symbol;Acc:HGNC:18798]34628-1.402-0.1124No
124CD74CD74 molecule [Source:HGNC Symbol;Acc:HGNC:1697]35074-1.612-0.1117No
125CYLDCYLD lysine 63 deubiquitinase [Source:HGNC Symbol;Acc:HGNC:2584]35113-1.633-0.0999No
126JAK3Janus kinase 3 [Source:HGNC Symbol;Acc:HGNC:6193]35209-1.679-0.0892No
127CALCOCO1calcium binding and coiled-coil domain 1 [Source:HGNC Symbol;Acc:HGNC:29306]35218-1.684-0.0762No
128TOM1L1target of myb1 like 1 membrane trafficking protein [Source:HGNC Symbol;Acc:HGNC:11983]35556-1.870-0.0706No
129HIVEP1HIVEP zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:4920]35977-2.194-0.0647No
130LIX1Llimb and CNS expressed 1 like [Source:HGNC Symbol;Acc:HGNC:28715]35989-2.198-0.0477No
131TRIM47tripartite motif containing 47 [Source:HGNC Symbol;Acc:HGNC:19020]36010-2.210-0.0308No
132FAM117Afamily with sequence similarity 117 member A [Source:HGNC Symbol;Acc:HGNC:24179]36047-2.239-0.0141No
133S1PR2sphingosine-1-phosphate receptor 2 [Source:HGNC Symbol;Acc:HGNC:3169]36182-2.3510.0007No
134CSF1Rcolony stimulating factor 1 receptor [Source:HGNC Symbol;Acc:HGNC:2433]36686-3.0210.0109No
Table: GSEA details [plain text format]



Fig 2: GGGNNTTTCC_NFKB_Q6_01   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GGGNNTTTCC_NFKB_Q6_01: Random ES distribution   
Gene set null distribution of ES for GGGNNTTTCC_NFKB_Q6_01