Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.Nof1.cls #KO_GAQ_versus_KO_NA.Nof1.cls #KO_GAQ_versus_KO_NA_repos |
| Phenotype | Nof1.cls#KO_GAQ_versus_KO_NA_repos |
| Upregulated in class | KO_GAQ |
| GeneSet | GNF2_CDH11 |
| Enrichment Score (ES) | 0.7726763 |
| Normalized Enrichment Score (NES) | 1.5332465 |
| Nominal p-value | 0.007905139 |
| FDR q-value | 0.2386138 |
| FWER p-Value | 0.871 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | SERPINE1 | serpin family E member 1 [Source:HGNC Symbol;Acc:HGNC:8583] | 492 | 2.096 | 0.1939 | Yes |
| 2 | GFPT2 | glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242] | 574 | 1.961 | 0.3856 | Yes |
| 3 | LAMC1 | laminin subunit gamma 1 [Source:HGNC Symbol;Acc:HGNC:6492] | 763 | 1.713 | 0.5499 | Yes |
| 4 | PXDN | peroxidasin [Source:HGNC Symbol;Acc:HGNC:14966] | 2002 | 0.935 | 0.6089 | Yes |
| 5 | RAI14 | retinoic acid induced 14 [Source:HGNC Symbol;Acc:HGNC:14873] | 2372 | 0.801 | 0.6782 | Yes |
| 6 | CALU | calumenin [Source:HGNC Symbol;Acc:HGNC:1458] | 2956 | 0.642 | 0.7259 | Yes |
| 7 | FBN1 | fibrillin 1 [Source:HGNC Symbol;Acc:HGNC:3603] | 3286 | 0.563 | 0.7727 | Yes |
| 8 | FKBP9 | FKBP prolyl isomerase 9 [Source:HGNC Symbol;Acc:HGNC:3725] | 10284 | 0.000 | 0.5839 | No |
| 9 | PTX3 | pentraxin 3 [Source:HGNC Symbol;Acc:HGNC:9692] | 12493 | 0.000 | 0.5243 | No |
| 10 | COL1A1 | collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197] | 13025 | 0.000 | 0.5100 | No |
| 11 | FN1 | fibronectin 1 [Source:HGNC Symbol;Acc:HGNC:3778] | 16781 | 0.000 | 0.4087 | No |
| 12 | COL6A2 | collagen type VI alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2212] | 18753 | 0.000 | 0.3555 | No |
| 13 | COL6A1 | collagen type VI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2211] | 18754 | 0.000 | 0.3555 | No |
| 14 | COL3A1 | collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201] | 19651 | 0.000 | 0.3314 | No |
| 15 | LOXL1 | lysyl oxidase like 1 [Source:HGNC Symbol;Acc:HGNC:6665] | 19822 | 0.000 | 0.3268 | No |
| 16 | LOXL2 | lysyl oxidase like 2 [Source:HGNC Symbol;Acc:HGNC:6666] | 19823 | 0.000 | 0.3268 | No |
| 17 | COL5A1 | collagen type V alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2209] | 20384 | 0.000 | 0.3117 | No |
| 18 | COL5A2 | collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210] | 20385 | 0.000 | 0.3117 | No |
| 19 | FSTL1 | follistatin like 1 [Source:HGNC Symbol;Acc:HGNC:3972] | 21471 | 0.000 | 0.2824 | No |
| 20 | THBS2 | thrombospondin 2 [Source:HGNC Symbol;Acc:HGNC:11786] | 22875 | 0.000 | 0.2445 | No |
| 21 | LAMB1 | laminin subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:6486] | 23943 | 0.000 | 0.2158 | No |
| 22 | SRPX | sushi repeat containing protein X-linked [Source:HGNC Symbol;Acc:HGNC:11309] | 27113 | 0.000 | 0.1303 | No |
| 23 | COL1A2 | collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198] | 30125 | -0.333 | 0.0819 | No |
| 24 | SERPINH1 | serpin family H member 1 [Source:HGNC Symbol;Acc:HGNC:1546] | 30923 | -0.452 | 0.1051 | No |
| 25 | CDH11 | cadherin 11 [Source:HGNC Symbol;Acc:HGNC:1750] | 31915 | -0.619 | 0.1396 | No |
