Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetGNF2_PCNA
Enrichment Score (ES)-0.84569097
Normalized Enrichment Score (NES)-1.7302701
Nominal p-value0.0
FDR q-value8.6577376E-4
FWER p-Value0.002
Table: GSEA Results Summary



Fig 1: Enrichment plot: GNF2_PCNA   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PA2G4proliferation-associated 2G4 [Source:HGNC Symbol;Acc:HGNC:8550]14351.187-0.0294No
2CKS2CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:2000]15041.154-0.0221No
3HNRNPABheterogeneous nuclear ribonucleoprotein A/B [Source:HGNC Symbol;Acc:HGNC:5034]20490.918-0.0296No
4DNAJC9DnaJ heat shock protein family (Hsp40) member C9 [Source:HGNC Symbol;Acc:HGNC:19123]49560.250-0.1061No
5ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]264300.000-0.6861No
6CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]27912-0.021-0.7259No
7SLBPstem-loop binding protein [Source:HGNC Symbol;Acc:HGNC:10904]30070-0.326-0.7816No
8FEN1flap structure-specific endonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3650]30452-0.375-0.7889No
9MT1JPmetallothionein 1J, pseudogene [Source:HGNC Symbol;Acc:HGNC:7402]32199-0.682-0.8307No
10NSD2nuclear receptor binding SET domain protein 2 [Source:HGNC Symbol;Acc:HGNC:12766]32214-0.686-0.8257No
11AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]32625-0.776-0.8306No
12TYMSthymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]32700-0.796-0.8263No
13HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]33267-0.949-0.8341No
14PLK4polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]33697-1.078-0.8372Yes
15TPX2TPX2 microtubule nucleation factor [Source:HGNC Symbol;Acc:HGNC:1249]33713-1.082-0.8290Yes
16PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]33721-1.084-0.8207Yes
17VRK1VRK serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:12718]34454-1.336-0.8299Yes
18MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]34522-1.361-0.8210Yes
19CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]34533-1.364-0.8105Yes
20MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]34655-1.411-0.8026Yes
21PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]34665-1.416-0.7916Yes
22DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]34894-1.508-0.7859Yes
23SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]34896-1.510-0.7740Yes
24FANCIFA complementation group I [Source:HGNC Symbol;Acc:HGNC:25568]35012-1.573-0.7647Yes
25CENPEcentromere protein E [Source:HGNC Symbol;Acc:HGNC:1856]35165-1.659-0.7557Yes
26CDCA8cell division cycle associated 8 [Source:HGNC Symbol;Acc:HGNC:14629]35266-1.714-0.7449Yes
27RRM1ribonucleotide reductase catalytic subunit M1 [Source:HGNC Symbol;Acc:HGNC:10451]35455-1.811-0.7356Yes
28PAXIP1PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]35480-1.825-0.7219Yes
29SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]35493-1.831-0.7077Yes
30PRIM1DNA primase subunit 1 [Source:HGNC Symbol;Acc:HGNC:9369]35508-1.842-0.6936Yes
31PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]35527-1.854-0.6794Yes
32KIF18Bkinesin family member 18B [Source:HGNC Symbol;Acc:HGNC:27102]35530-1.855-0.6648Yes
33SHCBP1SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]35572-1.882-0.6511Yes
34BUB1BBUB1 mitotic checkpoint serine/threonine kinase B [Source:HGNC Symbol;Acc:HGNC:1149]35645-1.933-0.6377Yes
35HMMRhyaluronan mediated motility receptor [Source:HGNC Symbol;Acc:HGNC:5012]35723-1.996-0.6241Yes
36MCM5minichromosome maintenance complex component 5 [Source:HGNC Symbol;Acc:HGNC:6948]35755-2.023-0.6089Yes
37POLE2DNA polymerase epsilon 2, accessory subunit [Source:HGNC Symbol;Acc:HGNC:9178]35868-2.107-0.5953Yes
38RAD54LRAD54 like [Source:HGNC Symbol;Acc:HGNC:9826]35882-2.115-0.5790Yes
39BIRC5baculoviral IAP repeat containing 5 [Source:HGNC Symbol;Acc:HGNC:593]35889-2.122-0.5624Yes
40MCM2minichromosome maintenance complex component 2 [Source:HGNC Symbol;Acc:HGNC:6944]35912-2.142-0.5461Yes
41GINS2GINS complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24575]35922-2.150-0.5293Yes
42KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]35930-2.153-0.5125Yes
43MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]35935-2.155-0.4956Yes
44TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]35959-2.181-0.4790Yes
45TMPOthymopoietin [Source:HGNC Symbol;Acc:HGNC:11875]35963-2.182-0.4618Yes
46TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]35968-2.186-0.4447Yes
47MCM6minichromosome maintenance complex component 6 [Source:HGNC Symbol;Acc:HGNC:6949]36012-2.211-0.4284Yes
48RFC4replication factor C subunit 4 [Source:HGNC Symbol;Acc:HGNC:9972]36015-2.212-0.4110Yes
49CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]36049-2.239-0.3942Yes
50CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]36081-2.263-0.3772Yes
51CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36232-2.394-0.3623Yes
52KIF15kinesin family member 15 [Source:HGNC Symbol;Acc:HGNC:17273]36265-2.434-0.3440Yes
53MELKmaternal embryonic leucine zipper kinase [Source:HGNC Symbol;Acc:HGNC:16870]36289-2.458-0.3252Yes
54GMNNgeminin DNA replication inhibitor [Source:HGNC Symbol;Acc:HGNC:17493]36301-2.470-0.3060Yes
55RACGAP1Rac GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9804]36326-2.499-0.2869Yes
56ESPL1extra spindle pole bodies like 1, separase [Source:HGNC Symbol;Acc:HGNC:16856]36438-2.629-0.2691Yes
57RAD51AP1RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]36458-2.656-0.2487Yes
58H2AXH2A.X variant histone [Source:HGNC Symbol;Acc:HGNC:4739]36470-2.674-0.2279Yes
59GINS1GINS complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:28980]36505-2.720-0.2073Yes
60MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]36546-2.789-0.1864Yes
61NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]36555-2.800-0.1645Yes
62NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36620-2.903-0.1433Yes
63MYBL2MYB proto-oncogene like 2 [Source:HGNC Symbol;Acc:HGNC:7548]36643-2.941-0.1206Yes
64RRM2ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]36679-3.000-0.0979Yes
65FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]36696-3.045-0.0743Yes
66ASPMassembly factor for spindle microtubules [Source:HGNC Symbol;Acc:HGNC:19048]36747-3.148-0.0508Yes
67DTLdenticleless E3 ubiquitin protein ligase homolog [Source:HGNC Symbol;Acc:HGNC:30288]36872-3.490-0.0266Yes
68MSH2mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]37024-4.1080.0018Yes
Table: GSEA details [plain text format]



Fig 2: GNF2_PCNA   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GNF2_PCNA: Random ES distribution   
Gene set null distribution of ES for GNF2_PCNA