Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetGNF2_RFC4
Enrichment Score (ES)-0.8039972
Normalized Enrichment Score (NES)-1.6127537
Nominal p-value0.0012738854
FDR q-value0.0033051795
FWER p-Value0.067
Table: GSEA Results Summary



Fig 1: Enrichment plot: GNF2_RFC4   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1DKC1dyskerin pseudouridine synthase 1 [Source:HGNC Symbol;Acc:HGNC:2890]11311.374-0.0163No
2CKS2CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:2000]15041.154-0.0144No
3RANBP1RAN binding protein 1 [Source:HGNC Symbol;Acc:HGNC:9847]22440.846-0.0256No
4RANRAN, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9846]26170.727-0.0281No
5SNRPD1small nuclear ribonucleoprotein D1 polypeptide [Source:HGNC Symbol;Acc:HGNC:11158]48940.258-0.0869No
6SNRPEsmall nuclear ribonucleoprotein polypeptide E [Source:HGNC Symbol;Acc:HGNC:11161]55020.162-0.1016No
7CCT2chaperonin containing TCP1 subunit 2 [Source:HGNC Symbol;Acc:HGNC:1615]56290.142-0.1035No
8ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]264300.000-0.6652No
9CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]27912-0.021-0.7050No
10SLBPstem-loop binding protein [Source:HGNC Symbol;Acc:HGNC:10904]30070-0.326-0.7598No
11FEN1flap structure-specific endonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3650]30452-0.375-0.7662No
12SSRP1structure specific recognition protein 1 [Source:HGNC Symbol;Acc:HGNC:11327]30899-0.449-0.7736No
13MCM10minichromosome maintenance 10 replication initiation factor [Source:HGNC Symbol;Acc:HGNC:18043]31158-0.486-0.7756No
14MLH1mutL homolog 1 [Source:HGNC Symbol;Acc:HGNC:7127]31170-0.489-0.7708No
15CTPS1CTP synthase 1 [Source:HGNC Symbol;Acc:HGNC:2519]31341-0.517-0.7700No
16ITGB3BPintegrin subunit beta 3 binding protein [Source:HGNC Symbol;Acc:HGNC:6157]31636-0.567-0.7721No
17SUPT16HSPT16 homolog, facilitates chromatin remodeling subunit [Source:HGNC Symbol;Acc:HGNC:11465]32023-0.646-0.7758No
18TYMSthymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]32700-0.796-0.7858No
19CKS1BCDC28 protein kinase regulatory subunit 1B [Source:HGNC Symbol;Acc:HGNC:19083]32783-0.819-0.7795No
20RFC3replication factor C subunit 3 [Source:HGNC Symbol;Acc:HGNC:9971]33690-1.077-0.7928Yes
21PLK4polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]33697-1.078-0.7818Yes
22PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]33721-1.084-0.7712Yes
23TIMELESStimeless circadian regulator [Source:HGNC Symbol;Acc:HGNC:11813]34130-1.218-0.7696Yes
24H2AZ1H2A.Z variant histone 1 [Source:HGNC Symbol;Acc:HGNC:4741]34219-1.252-0.7590Yes
25MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]34522-1.361-0.7530Yes
26KNTC1kinetochore associated 1 [Source:HGNC Symbol;Acc:HGNC:17255]34524-1.362-0.7389Yes
27MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]34655-1.411-0.7278Yes
28PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]34665-1.416-0.7134Yes
29SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]34896-1.510-0.7039Yes
30RPA3replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291]34976-1.554-0.6900Yes
31FANCIFA complementation group I [Source:HGNC Symbol;Acc:HGNC:25568]35012-1.573-0.6746Yes
32UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]35315-1.737-0.6647Yes
33RRM1ribonucleotide reductase catalytic subunit M1 [Source:HGNC Symbol;Acc:HGNC:10451]35455-1.811-0.6497Yes
34SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]35493-1.831-0.6317Yes
35PRIM1DNA primase subunit 1 [Source:HGNC Symbol;Acc:HGNC:9369]35508-1.842-0.6130Yes
36RFC5replication factor C subunit 5 [Source:HGNC Symbol;Acc:HGNC:9973]35534-1.859-0.5944Yes
37RAD54LRAD54 like [Source:HGNC Symbol;Acc:HGNC:9826]35882-2.115-0.5819Yes
38BIRC5baculoviral IAP repeat containing 5 [Source:HGNC Symbol;Acc:HGNC:593]35889-2.122-0.5600Yes
39MCM2minichromosome maintenance complex component 2 [Source:HGNC Symbol;Acc:HGNC:6944]35912-2.142-0.5384Yes
40GINS2GINS complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24575]35922-2.150-0.5164Yes
41KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]35930-2.153-0.4942Yes
42TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]35959-2.181-0.4724Yes
43TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]35968-2.186-0.4499Yes
44MCM6minichromosome maintenance complex component 6 [Source:HGNC Symbol;Acc:HGNC:6949]36012-2.211-0.4282Yes
45RFC4replication factor C subunit 4 [Source:HGNC Symbol;Acc:HGNC:9972]36015-2.212-0.4053Yes
46CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]36049-2.239-0.3830Yes
47CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]36081-2.263-0.3604Yes
48CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36232-2.394-0.3396Yes
49GMNNgeminin DNA replication inhibitor [Source:HGNC Symbol;Acc:HGNC:17493]36301-2.470-0.3158Yes
50RAD51AP1RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]36458-2.656-0.2925Yes
51PAICSphosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase [Source:HGNC Symbol;Acc:HGNC:8587]36467-2.673-0.2650Yes
52GINS1GINS complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:28980]36505-2.720-0.2378Yes
53NCAPD2non-SMC condensin I complex subunit D2 [Source:HGNC Symbol;Acc:HGNC:24305]36519-2.751-0.2096Yes
54MSH6mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]36544-2.786-0.1814Yes
55MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]36546-2.789-0.1525Yes
56NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36620-2.903-0.1244Yes
57LIG1DNA ligase 1 [Source:HGNC Symbol;Acc:HGNC:6598]36627-2.912-0.0944Yes
58FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]36696-3.045-0.0646Yes
59ASPMassembly factor for spindle microtubules [Source:HGNC Symbol;Acc:HGNC:19048]36747-3.148-0.0334Yes
60MSH2mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]37024-4.1080.0018Yes
Table: GSEA details [plain text format]



Fig 2: GNF2_RFC4   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GNF2_RFC4: Random ES distribution   
Gene set null distribution of ES for GNF2_RFC4