Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetGNF2_SMC4L1
Enrichment Score (ES)-0.78825223
Normalized Enrichment Score (NES)-1.6300867
Nominal p-value0.0
FDR q-value0.0021052342
FWER p-Value0.037
Table: GSEA Results Summary



Fig 1: Enrichment plot: GNF2_SMC4L1   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1GAR1GAR1 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:14264]6851.818-0.0045No
2DKC1dyskerin pseudouridine synthase 1 [Source:HGNC Symbol;Acc:HGNC:2890]11311.374-0.0058No
3EIF2S1eukaryotic translation initiation factor 2 subunit alpha [Source:HGNC Symbol;Acc:HGNC:3265]14731.164-0.0061No
4CKS2CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:2000]15041.1540.0021No
5HNRNPABheterogeneous nuclear ribonucleoprotein A/B [Source:HGNC Symbol;Acc:HGNC:5034]20490.918-0.0055No
6NUP153nucleoporin 153 [Source:HGNC Symbol;Acc:HGNC:8062]22060.861-0.0031No
7SRSF1serine and arginine rich splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:10780]25150.757-0.0056No
8SNRPD1small nuclear ribonucleoprotein D1 polypeptide [Source:HGNC Symbol;Acc:HGNC:11158]48940.258-0.0678No
9DNAJC9DnaJ heat shock protein family (Hsp40) member C9 [Source:HGNC Symbol;Acc:HGNC:19123]49560.250-0.0675No
10METAP2methionyl aminopeptidase 2 [Source:HGNC Symbol;Acc:HGNC:16672]52390.202-0.0736No
11MRPL35mitochondrial ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:14489]55920.147-0.0820No
12ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]264300.000-0.6450No
13CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]27912-0.021-0.6849No
14DHFRdihydrofolate reductase [Source:HGNC Symbol;Acc:HGNC:2861]27938-0.026-0.6854No
15SNRPGsmall nuclear ribonucleoprotein polypeptide G [Source:HGNC Symbol;Acc:HGNC:11163]27997-0.031-0.6867No
16SERBP1SERPINE1 mRNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:17860]28578-0.114-0.7015No
17ANP32Eacidic nuclear phosphoprotein 32 family member E [Source:HGNC Symbol;Acc:HGNC:16673]28974-0.167-0.7109No
18SLBPstem-loop binding protein [Source:HGNC Symbol;Acc:HGNC:10904]30070-0.326-0.7379No
19HNRNPA3P1heterogeneous nuclear ribonucleoprotein A3 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:13729]30190-0.339-0.7385No
20COPS3COP9 signalosome subunit 3 [Source:HGNC Symbol;Acc:HGNC:2239]30231-0.345-0.7369No
21FEN1flap structure-specific endonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3650]30452-0.375-0.7400No
22ANP32Bacidic nuclear phosphoprotein 32 family member B [Source:HGNC Symbol;Acc:HGNC:16677]30857-0.442-0.7475No
23SSRP1structure specific recognition protein 1 [Source:HGNC Symbol;Acc:HGNC:11327]30899-0.449-0.7451No
24SUPT16HSPT16 homolog, facilitates chromatin remodeling subunit [Source:HGNC Symbol;Acc:HGNC:11465]32023-0.646-0.7705No
25PCCBpropionyl-CoA carboxylase subunit beta [Source:HGNC Symbol;Acc:HGNC:8654]32450-0.733-0.7763No
26AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]32625-0.776-0.7750No
27TYMSthymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]32700-0.796-0.7708No
28HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]33267-0.949-0.7788No
29HAT1histone acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:4821]33618-1.054-0.7801Yes
30RFC3replication factor C subunit 3 [Source:HGNC Symbol;Acc:HGNC:9971]33690-1.077-0.7737Yes
31PLK4polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]33697-1.078-0.7655Yes
32PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]33721-1.084-0.7578Yes
33DTYMKdeoxythymidylate kinase [Source:HGNC Symbol;Acc:HGNC:3061]33914-1.155-0.7540Yes
34EXOSC8exosome component 8 [Source:HGNC Symbol;Acc:HGNC:17035]34270-1.270-0.7538Yes
35USP1ubiquitin specific peptidase 1 [Source:HGNC Symbol;Acc:HGNC:12607]34285-1.275-0.7443Yes
36VRK1VRK serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:12718]34454-1.336-0.7385Yes
37MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]34522-1.361-0.7298Yes
38CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]34533-1.364-0.7195Yes
39DUTdeoxyuridine triphosphatase [Source:HGNC Symbol;Acc:HGNC:3078]34584-1.386-0.7101Yes
40MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]34655-1.411-0.7011Yes
41PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]34665-1.416-0.6904Yes
42DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]34894-1.508-0.6849Yes
43SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]34896-1.510-0.6732Yes
44FANCIFA complementation group I [Source:HGNC Symbol;Acc:HGNC:25568]35012-1.573-0.6642Yes
45ZWILCHzwilch kinetochore protein [Source:HGNC Symbol;Acc:HGNC:25468]35080-1.616-0.6535Yes
46NASPnuclear autoantigenic sperm protein [Source:HGNC Symbol;Acc:HGNC:7644]35131-1.642-0.6421Yes
47CDCA8cell division cycle associated 8 [Source:HGNC Symbol;Acc:HGNC:14629]35266-1.714-0.6325Yes
48FBXO5F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]35355-1.754-0.6213Yes
49RRM1ribonucleotide reductase catalytic subunit M1 [Source:HGNC Symbol;Acc:HGNC:10451]35455-1.811-0.6100Yes
50SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]35493-1.831-0.5968Yes
51PRIM1DNA primase subunit 1 [Source:HGNC Symbol;Acc:HGNC:9369]35508-1.842-0.5829Yes
52DEKDEK proto-oncogene [Source:HGNC Symbol;Acc:HGNC:2768]35509-1.842-0.5687Yes
53PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]35527-1.854-0.5548Yes
54KIF18Bkinesin family member 18B [Source:HGNC Symbol;Acc:HGNC:27102]35530-1.855-0.5405Yes
55SHCBP1SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]35572-1.882-0.5271Yes
56BUB1BBUB1 mitotic checkpoint serine/threonine kinase B [Source:HGNC Symbol;Acc:HGNC:1149]35645-1.933-0.5141Yes
57HMMRhyaluronan mediated motility receptor [Source:HGNC Symbol;Acc:HGNC:5012]35723-1.996-0.5007Yes
58MCM5minichromosome maintenance complex component 5 [Source:HGNC Symbol;Acc:HGNC:6948]35755-2.023-0.4859Yes
59POLE2DNA polymerase epsilon 2, accessory subunit [Source:HGNC Symbol;Acc:HGNC:9178]35868-2.107-0.4726Yes
60MCM2minichromosome maintenance complex component 2 [Source:HGNC Symbol;Acc:HGNC:6944]35912-2.142-0.4572Yes
61GINS2GINS complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24575]35922-2.150-0.4408Yes
62KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]35930-2.153-0.4244Yes
63TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]35959-2.181-0.4082Yes
64TMPOthymopoietin [Source:HGNC Symbol;Acc:HGNC:11875]35963-2.182-0.3914Yes
65TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]35968-2.186-0.3746Yes
66RFC4replication factor C subunit 4 [Source:HGNC Symbol;Acc:HGNC:9972]36015-2.212-0.3588Yes
67CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]36049-2.239-0.3423Yes
68CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]36081-2.263-0.3257Yes
69CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36232-2.394-0.3112Yes
70CKAP2cytoskeleton associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1990]36277-2.444-0.2935Yes
71GMNNgeminin DNA replication inhibitor [Source:HGNC Symbol;Acc:HGNC:17493]36301-2.470-0.2750Yes
72RACGAP1Rac GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9804]36326-2.499-0.2563Yes
73CBX3chromobox 3 [Source:HGNC Symbol;Acc:HGNC:1553]36350-2.527-0.2374Yes
74RAD51AP1RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]36458-2.656-0.2198Yes
75H2AXH2A.X variant histone [Source:HGNC Symbol;Acc:HGNC:4739]36470-2.674-0.1994Yes
76GINS1GINS complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:28980]36505-2.720-0.1793Yes
77MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]36546-2.789-0.1588Yes
78NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]36555-2.800-0.1373Yes
79NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36620-2.903-0.1166Yes
80E2F8E2F transcription factor 8 [Source:HGNC Symbol;Acc:HGNC:24727]36622-2.908-0.0941Yes
81FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]36696-3.045-0.0726Yes
82ASPMassembly factor for spindle microtubules [Source:HGNC Symbol;Acc:HGNC:19048]36747-3.148-0.0496Yes
83DTLdenticleless E3 ubiquitin protein ligase homolog [Source:HGNC Symbol;Acc:HGNC:30288]36872-3.490-0.0259Yes
84MSH2mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]37024-4.1080.0018Yes
Table: GSEA details [plain text format]



Fig 2: GNF2_SMC4L1   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GNF2_SMC4L1: Random ES distribution   
Gene set null distribution of ES for GNF2_SMC4L1