Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetGOBP_HOMOLOGOUS_CHROMOSOME_PAIRING_AT_MEIOSIS
Enrichment Score (ES)-0.82928616
Normalized Enrichment Score (NES)-1.6208957
Nominal p-value0.0012903226
FDR q-value0.042894974
FWER p-Value0.475
Table: GSEA Results Summary



Fig 1: Enrichment plot: GOBP_HOMOLOGOUS_CHROMOSOME_PAIRING_AT_MEIOSIS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1RNF212ring finger protein 212 [Source:HGNC Symbol;Acc:HGNC:27729]48340.271-0.1209No
2BAG6BAG cochaperone 6 [Source:HGNC Symbol;Acc:HGNC:13919]62990.042-0.1589No
3UBE2Bubiquitin conjugating enzyme E2 B [Source:HGNC Symbol;Acc:HGNC:12473]63720.027-0.1599No
4ANKRD31ankyrin repeat domain 31 [Source:HGNC Symbol;Acc:HGNC:26853]79010.000-0.2012No
5STAG3stromal antigen 3 [Source:HGNC Symbol;Acc:HGNC:11356]80550.000-0.2053No
6RAD21L1RAD21 cohesin complex component like 1 [Source:HGNC Symbol;Acc:HGNC:16271]82760.000-0.2113No
7C1orf146chromosome 1 open reading frame 146 [Source:HGNC Symbol;Acc:HGNC:24032]103000.000-0.2659No
8MEIOCmeiosis specific with coiled-coil domain [Source:HGNC Symbol;Acc:HGNC:26670]109370.000-0.2830No
9RNF212Bring finger protein 212B [Source:HGNC Symbol;Acc:HGNC:20438]117740.000-0.3056No
10IHO1interactor of HORMAD1 1 [Source:HGNC Symbol;Acc:HGNC:27945]129190.000-0.3365No
11TERB1telomere repeat binding bouquet formation protein 1 [Source:HGNC Symbol;Acc:HGNC:26675]132720.000-0.3460No
12TERB2telomere repeat binding bouquet formation protein 2 [Source:HGNC Symbol;Acc:HGNC:28520]132730.000-0.3460No
13REC8REC8 meiotic recombination protein [Source:HGNC Symbol;Acc:HGNC:16879]138400.000-0.3613No
14TEX11testis expressed 11 [Source:HGNC Symbol;Acc:HGNC:11733]153800.000-0.4028No
15TEX12testis expressed 12 [Source:HGNC Symbol;Acc:HGNC:11734]153810.000-0.4028No
16TEX15testis expressed 15, meiosis and synapsis associated [Source:HGNC Symbol;Acc:HGNC:11738]153820.000-0.4028No
17MEI4meiotic double-stranded break formation protein 4 [Source:HGNC Symbol;Acc:HGNC:43638]164590.000-0.4319No
18DMC1DNA meiotic recombinase 1 [Source:HGNC Symbol;Acc:HGNC:2927]169620.000-0.4454No
19SYCE3synaptonemal complex central element protein 3 [Source:HGNC Symbol;Acc:HGNC:35245]170500.000-0.4478No
20SYCE1synaptonemal complex central element protein 1 [Source:HGNC Symbol;Acc:HGNC:28852]170510.000-0.4478No
21SYCP1synaptonemal complex protein 1 [Source:HGNC Symbol;Acc:HGNC:11487]178990.000-0.4706No
22CCNB1IP1cyclin B1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:19437]183480.000-0.4827No
23P3H4prolyl 3-hydroxylase family member 4 (inactive) [Source:HGNC Symbol;Acc:HGNC:16946]186010.000-0.4895No
24SPO11SPO11 initiator of meiotic double stranded breaks [Source:HGNC Symbol;Acc:HGNC:11250]194740.000-0.5131No
25C14orf39chromosome 14 open reading frame 39 [Source:HGNC Symbol;Acc:HGNC:19849]197140.000-0.5195No
26SYCE1Lsynaptonemal complex central element protein 1 like [Source:HGNC Symbol;Acc:HGNC:37236]228300.000-0.6036No
27MAJINmembrane anchored junction protein [Source:HGNC Symbol;Acc:HGNC:27441]251070.000-0.6651No
28SPATA22spermatogenesis associated 22 [Source:HGNC Symbol;Acc:HGNC:30705]252490.000-0.6689No
29MAELmaelstrom spermatogenic transposon silencer [Source:HGNC Symbol;Acc:HGNC:25929]274540.000-0.7284No
30SYCE2synaptonemal complex central element protein 2 [Source:HGNC Symbol;Acc:HGNC:27411]27963-0.029-0.7411No
31SYCP2synaptonemal complex protein 2 [Source:HGNC Symbol;Acc:HGNC:11490]28828-0.147-0.7592No
32NDC1NDC1 transmembrane nucleoporin [Source:HGNC Symbol;Acc:HGNC:25525]29144-0.191-0.7610No
33MSH4mutS homolog 4 [Source:HGNC Symbol;Acc:HGNC:7327]29297-0.215-0.7574No
34PRDM9PR/SET domain 9 [Source:HGNC Symbol;Acc:HGNC:13994]29615-0.261-0.7568No
35MLH1mutL homolog 1 [Source:HGNC Symbol;Acc:HGNC:7127]31170-0.489-0.7814No
36SIRT7sirtuin 7 [Source:HGNC Symbol;Acc:HGNC:14935]32945-0.861-0.7988Yes
37HORMAD1HORMA domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25245]33681-1.073-0.7806Yes
38ZCWPW1zinc finger CW-type and PWWP domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23486]33716-1.082-0.7432Yes
39TRIP13thyroid hormone receptor interactor 13 [Source:HGNC Symbol;Acc:HGNC:12307]33877-1.138-0.7072Yes
40BRIP1BRCA1 interacting protein C-terminal helicase 1 [Source:HGNC Symbol;Acc:HGNC:20473]34013-1.188-0.6687Yes
41MRE11MRE11 homolog, double strand break repair nuclease [Source:HGNC Symbol;Acc:HGNC:7230]34816-1.469-0.6383Yes
42KASH5KASH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:26520]34858-1.491-0.5866Yes
43RAD21RAD21 cohesin complex component [Source:HGNC Symbol;Acc:HGNC:9811]35250-1.704-0.5368Yes
44AGO4argonaute RISC component 4 [Source:HGNC Symbol;Acc:HGNC:18424]35279-1.719-0.4766Yes
45FANCD2FA complementation group D2 [Source:HGNC Symbol;Acc:HGNC:3585]35542-1.863-0.4177Yes
46MLH3mutL homolog 3 [Source:HGNC Symbol;Acc:HGNC:7128]36170-2.345-0.3516Yes
47CCNE1cyclin E1 [Source:HGNC Symbol;Acc:HGNC:1589]36789-3.243-0.2534Yes
48CCNE2cyclin E2 [Source:HGNC Symbol;Acc:HGNC:1590]36884-3.527-0.1309Yes
49MEIOBmeiosis specific with OB-fold [Source:HGNC Symbol;Acc:HGNC:28569]36974-3.8520.0031Yes
Table: GSEA details [plain text format]



Fig 2: GOBP_HOMOLOGOUS_CHROMOSOME_PAIRING_AT_MEIOSIS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GOBP_HOMOLOGOUS_CHROMOSOME_PAIRING_AT_MEIOSIS: Random ES distribution   
Gene set null distribution of ES for GOBP_HOMOLOGOUS_CHROMOSOME_PAIRING_AT_MEIOSIS