Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_GAQ
GeneSetBMI1_DN_MEL18_DN.V1_UP
Enrichment Score (ES)0.5051219
Normalized Enrichment Score (NES)1.3574628
Nominal p-value0.0
FDR q-value0.09447338
FWER p-Value0.29
Table: GSEA Results Summary



Fig 1: Enrichment plot: BMI1_DN_MEL18_DN.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1VEGFCvascular endothelial growth factor C [Source:HGNC Symbol;Acc:HGNC:12682]64.8530.0355Yes
2IL1Ainterleukin 1 alpha [Source:HGNC Symbol;Acc:HGNC:5991]84.8500.0712Yes
3FOSL1FOS like 1, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:13718]154.6780.1054Yes
4ZC3H12Azinc finger CCCH-type containing 12A [Source:HGNC Symbol;Acc:HGNC:26259]504.1000.1347Yes
5ITGA5integrin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6141]693.8080.1622Yes
6C3AR1complement C3a receptor 1 [Source:HGNC Symbol;Acc:HGNC:1319]743.7550.1897Yes
7EDN1endothelin 1 [Source:HGNC Symbol;Acc:HGNC:3176]763.7350.2172Yes
8SLC7A11solute carrier family 7 member 11 [Source:HGNC Symbol;Acc:HGNC:11059]823.6360.2438Yes
9ABCA1ATP binding cassette subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:29]2192.8430.2610Yes
10EHD1EH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:3242]2712.6600.2792Yes
11PMEPA1prostate transmembrane protein, androgen induced 1 [Source:HGNC Symbol;Acc:HGNC:14107]2762.6490.2986Yes
12CHST11carbohydrate sulfotransferase 11 [Source:HGNC Symbol;Acc:HGNC:17422]2902.5960.3173Yes
13PIEZO1piezo type mechanosensitive ion channel component 1 [Source:HGNC Symbol;Acc:HGNC:28993]3072.5110.3353Yes
14FAPfibroblast activation protein alpha [Source:HGNC Symbol;Acc:HGNC:3590]3932.2650.3497Yes
15PIM1Pim-1 proto-oncogene, serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:8986]3952.2610.3663Yes
16CRISPLD2cysteine rich secretory protein LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25248]4072.2500.3826Yes
17TNIP3TNFAIP3 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:19315]5721.9620.3925Yes
18GFPT2glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]5741.9610.4069Yes
19NRP2neuropilin 2 [Source:HGNC Symbol;Acc:HGNC:8005]6541.8390.4183Yes
20LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]7111.7790.4299Yes
21ATF3activating transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:785]7641.7120.4411Yes
22GADD45Agrowth arrest and DNA damage inducible alpha [Source:HGNC Symbol;Acc:HGNC:4095]8401.6190.4510Yes
23RUSC2RUN and SH3 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23625]12331.3080.4500Yes
24LCP1lymphocyte cytosolic protein 1 [Source:HGNC Symbol;Acc:HGNC:6528]13181.2610.4570Yes
25FJX1four-jointed box kinase 1 [Source:HGNC Symbol;Acc:HGNC:17166]13591.2330.4650Yes
26CDC42EP2CDC42 effector protein 2 [Source:HGNC Symbol;Acc:HGNC:16263]15531.1340.4681Yes
27SIK1salt inducible kinase 1 [Source:HGNC Symbol;Acc:HGNC:11142]17381.0440.4708Yes
28KCNN4potassium calcium-activated channel subfamily N member 4 [Source:HGNC Symbol;Acc:HGNC:6293]18500.9980.4751Yes
29SLC7A5solute carrier family 7 member 5 [Source:HGNC Symbol;Acc:HGNC:11063]19140.9700.4806Yes
30ARL4AADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]19380.9630.4870Yes
31KMT2Alysine methyltransferase 2A [Source:HGNC Symbol;Acc:HGNC:7132]19510.9600.4938Yes
32NKAIN1sodium/potassium transporting ATPase interacting 1 [Source:HGNC Symbol;Acc:HGNC:25743]20290.9230.4985Yes
33TFECtranscription factor EC [Source:HGNC Symbol;Acc:HGNC:11754]22330.8500.4992Yes
34ZEB2zinc finger E-box binding homeobox 2 [Source:HGNC Symbol;Acc:HGNC:14881]23030.8260.5034Yes
35SLC1A4solute carrier family 1 member 4 [Source:HGNC Symbol;Acc:HGNC:10942]25850.7370.5012Yes
36KLF7Kruppel like factor 7 [Source:HGNC Symbol;Acc:HGNC:6350]26790.7070.5039Yes
37SLC19A1solute carrier family 19 member 1 [Source:HGNC Symbol;Acc:HGNC:10937]28200.6780.5051Yes
38DUSP10dual specificity phosphatase 10 [Source:HGNC Symbol;Acc:HGNC:3065]34470.5250.4920No
39MAP3K7CLMAP3K7 C-terminal like [Source:HGNC Symbol;Acc:HGNC:16457]34740.5190.4952No
40TNFAIP6TNF alpha induced protein 6 [Source:HGNC Symbol;Acc:HGNC:11898]36330.4870.4945No
41MICALL1MICAL like 1 [Source:HGNC Symbol;Acc:HGNC:29804]36340.4860.4980No
42PODXLpodocalyxin like [Source:HGNC Symbol;Acc:HGNC:9171]37680.4590.4978No
43MT1Fmetallothionein 1F [Source:HGNC Symbol;Acc:HGNC:7398]44050.3420.4831No
44HBEGFheparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059]44740.3320.4837No
45TGFB2transforming growth factor beta 2 [Source:HGNC Symbol;Acc:HGNC:11768]46710.3010.4806No
46PIK3CGphosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma [Source:HGNC Symbol;Acc:HGNC:8978]47540.2870.4805No
47TNFRSF8TNF receptor superfamily member 8 [Source:HGNC Symbol;Acc:HGNC:11923]47690.2840.4822No
48BIRC3baculoviral IAP repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:591]50080.2420.4776No
49IL7Rinterleukin 7 receptor [Source:HGNC Symbol;Acc:HGNC:6024]50120.2410.4793No
50ZNF639zinc finger protein 639 [Source:HGNC Symbol;Acc:HGNC:30950]50550.2320.4798No
51GAB2GRB2 associated binding protein 2 [Source:HGNC Symbol;Acc:HGNC:14458]51310.2170.4794No
52INHBAinhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066]53800.1790.4740No
53RREB1ras responsive element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:10449]55590.1530.4703No
54TEKTEK receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:11724]58000.1240.4647No
55ASPHaspartate beta-hydroxylase [Source:HGNC Symbol;Acc:HGNC:757]59490.0970.4614No
56CSPG4chondroitin sulfate proteoglycan 4 [Source:HGNC Symbol;Acc:HGNC:2466]60120.0870.4604No
57FGF21fibroblast growth factor 21 [Source:HGNC Symbol;Acc:HGNC:3678]71210.0000.4304No
58ABLIM3actin binding LIM protein family member 3 [Source:HGNC Symbol;Acc:HGNC:29132]72660.0000.4265No
59GREM1gremlin 1, DAN family BMP antagonist [Source:HGNC Symbol;Acc:HGNC:2001]84490.0000.3945No
60TNFSF9TNF superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11939]90540.0000.3782No
61VLDLRvery low density lipoprotein receptor [Source:HGNC Symbol;Acc:HGNC:12698]97150.0000.3603No
62TNFRSF9TNF receptor superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11924]99760.0000.3533No
63PLATplasminogen activator, tissue type [Source:HGNC Symbol;Acc:HGNC:9051]100920.0000.3502No
64ADAM19ADAM metallopeptidase domain 19 [Source:HGNC Symbol;Acc:HGNC:197]101040.0000.3499No
65ADAM12ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]101060.0000.3498No
66ADM2adrenomedullin 2 [Source:HGNC Symbol;Acc:HGNC:28898]112930.0000.3177No
67LRRC15leucine rich repeat containing 15 [Source:HGNC Symbol;Acc:HGNC:20818]115560.0000.3106No
68PTHLHparathyroid hormone like hormone [Source:HGNC Symbol;Acc:HGNC:9607]117930.0000.3043No
69VNN1vanin 1 [Source:HGNC Symbol;Acc:HGNC:12705]128790.0000.2749No
70TACR3tachykinin receptor 3 [Source:HGNC Symbol;Acc:HGNC:11528]133440.0000.2623No
71GDF5growth differentiation factor 5 [Source:HGNC Symbol;Acc:HGNC:4220]135590.0000.2565No
72P2RX5purinergic receptor P2X 5 [Source:HGNC Symbol;Acc:HGNC:8536]142700.0000.2373No
73COL13A1collagen type XIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2190]156180.0000.2009No
74HTR1D5-hydroxytryptamine receptor 1D [Source:HGNC Symbol;Acc:HGNC:5289]156710.0000.1995No
75F3coagulation factor III, tissue factor [Source:HGNC Symbol;Acc:HGNC:3541]162160.0000.1847No
76COL16A1collagen type XVI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2193]165370.0000.1761No
77GALgalanin and GMAP prepropeptide [Source:HGNC Symbol;Acc:HGNC:4114]169590.0000.1647No
78TIMP3TIMP metallopeptidase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:11822]171960.0000.1583No
79MGLLmonoglyceride lipase [Source:HGNC Symbol;Acc:HGNC:17038]172080.0000.1580No
80FAM189A1family with sequence similarity 189 member A1 [Source:HGNC Symbol;Acc:HGNC:29075]173740.0000.1535No
81HAPLN1hyaluronan and proteoglycan link protein 1 [Source:HGNC Symbol;Acc:HGNC:2380]174690.0000.1510No
82MICAMHC class I polypeptide-related sequence A [Source:HGNC Symbol;Acc:HGNC:7090]177300.0000.1439No
83PAPPApappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]179220.0000.1388No
84CDH13cadherin 13 [Source:HGNC Symbol;Acc:HGNC:1753]187560.0000.1162No
85BMP5bone morphogenetic protein 5 [Source:HGNC Symbol;Acc:HGNC:1072]191000.0000.1069No
86MMP7matrix metallopeptidase 7 [Source:HGNC Symbol;Acc:HGNC:7174]191260.0000.1063No
87CXCL8C-X-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:6025]194710.0000.0970No
88CXCL1C-X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:4602]194800.0000.0967No
89TCIMtranscriptional and immune response regulator [Source:HGNC Symbol;Acc:HGNC:1357]198790.0000.0860No
90SCML2Scm polycomb group protein like 2 [Source:HGNC Symbol;Acc:HGNC:10581]203380.0000.0736No
91KRT75keratin 75 [Source:HGNC Symbol;Acc:HGNC:24431]221330.0000.0250No
92CPA4carboxypeptidase A4 [Source:HGNC Symbol;Acc:HGNC:15740]237020.000-0.0174No
93NPPBnatriuretic peptide B [Source:HGNC Symbol;Acc:HGNC:7940]238760.000-0.0221No
94LAMB3laminin subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:6490]239400.000-0.0238No
95CSF2colony stimulating factor 2 [Source:HGNC Symbol;Acc:HGNC:2434]247240.000-0.0450No
96NT5E5'-nucleotidase ecto [Source:HGNC Symbol;Acc:HGNC:8021]249340.000-0.0507No
97LSAMPlimbic system associated membrane protein [Source:HGNC Symbol;Acc:HGNC:6705]249390.000-0.0508No
98WNT5BWnt family member 5B [Source:HGNC Symbol;Acc:HGNC:16265]249620.000-0.0514No
99CLDN1claudin 1 [Source:HGNC Symbol;Acc:HGNC:2032]250690.000-0.0542No
100PDCD1LG2programmed cell death 1 ligand 2 [Source:HGNC Symbol;Acc:HGNC:18731]258410.000-0.0751No
101PLAURplasminogen activator, urokinase receptor [Source:HGNC Symbol;Acc:HGNC:9053]259400.000-0.0778No
102ITGB8integrin subunit beta 8 [Source:HGNC Symbol;Acc:HGNC:6163]266970.000-0.0982No
103ITGB6integrin subunit beta 6 [Source:HGNC Symbol;Acc:HGNC:6161]267000.000-0.0983No
104PAGE1PAGE family member 1 [Source:HGNC Symbol;Acc:HGNC:4107]267920.000-0.1007No
105APBB2amyloid beta precursor protein binding family B member 2 [Source:HGNC Symbol;Acc:HGNC:582]27942-0.027-0.1316No
106HAS2hyaluronan synthase 2 [Source:HGNC Symbol;Acc:HGNC:4819]28337-0.082-0.1417No
107CSF1colony stimulating factor 1 [Source:HGNC Symbol;Acc:HGNC:2432]28392-0.088-0.1425No
108ITGA3integrin subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:6139]28425-0.093-0.1427No
109ADGBandroglobin [Source:HGNC Symbol;Acc:HGNC:21212]28648-0.124-0.1478No
110STX1Asyntaxin 1A [Source:HGNC Symbol;Acc:HGNC:11433]28704-0.133-0.1483No
111TRIB3tribbles pseudokinase 3 [Source:HGNC Symbol;Acc:HGNC:16228]28809-0.145-0.1501No
112KCNN3potassium calcium-activated channel subfamily N member 3 [Source:HGNC Symbol;Acc:HGNC:6292]28970-0.167-0.1532No
113BST1bone marrow stromal cell antigen 1 [Source:HGNC Symbol;Acc:HGNC:1118]29127-0.188-0.1560No
114TAGLNtransgelin [Source:HGNC Symbol;Acc:HGNC:11553]29242-0.208-0.1576No
115TUFT1tuftelin 1 [Source:HGNC Symbol;Acc:HGNC:12422]29880-0.301-0.1726No
116VEGFAvascular endothelial growth factor A [Source:HGNC Symbol;Acc:HGNC:12680]30658-0.411-0.1906No
117ARNTL2aryl hydrocarbon receptor nuclear translocator like 2 [Source:HGNC Symbol;Acc:HGNC:18984]30697-0.417-0.1886No
118STC2stanniocalcin 2 [Source:HGNC Symbol;Acc:HGNC:11374]31438-0.533-0.2047No
119C2CD2C2 calcium dependent domain containing 2 [Source:HGNC Symbol;Acc:HGNC:1266]31618-0.565-0.2054No
120PSAT1phosphoserine aminotransferase 1 [Source:HGNC Symbol;Acc:HGNC:19129]32025-0.646-0.2116No
121ANXA3annexin A3 [Source:HGNC Symbol;Acc:HGNC:541]32049-0.651-0.2074No
122CCND1cyclin D1 [Source:HGNC Symbol;Acc:HGNC:1582]32180-0.677-0.2060No
123INHBEinhibin subunit beta E [Source:HGNC Symbol;Acc:HGNC:24029]32435-0.728-0.2075No
124JAG1jagged canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:6188]32521-0.751-0.2043No
125ARL4CADP ribosylation factor like GTPase 4C [Source:HGNC Symbol;Acc:HGNC:698]32703-0.797-0.2033No
126TRIOtrio Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:12303]32869-0.839-0.2016No
127ADGRE5adhesion G protein-coupled receptor E5 [Source:HGNC Symbol;Acc:HGNC:1711]33070-0.889-0.2005No
128COL7A1collagen type VII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2214]33570-1.040-0.2063No
129SLC22A4solute carrier family 22 member 4 [Source:HGNC Symbol;Acc:HGNC:10968]33571-1.041-0.1987No
130SLC6A9solute carrier family 6 member 9 [Source:HGNC Symbol;Acc:HGNC:11056]33804-1.112-0.1968No
131KIF21Bkinesin family member 21B [Source:HGNC Symbol;Acc:HGNC:29442]34542-1.366-0.2067No
132ADMadrenomedullin [Source:HGNC Symbol;Acc:HGNC:259]34931-1.530-0.2059No
133CHST3carbohydrate sulfotransferase 3 [Source:HGNC Symbol;Acc:HGNC:1971]35516-1.846-0.2081No
134FADS3fatty acid desaturase 3 [Source:HGNC Symbol;Acc:HGNC:3576]35844-2.085-0.2016No
135LHFPL2LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]36048-2.239-0.1907No
136NAV2neuron navigator 2 [Source:HGNC Symbol;Acc:HGNC:15997]36253-2.421-0.1784No
137C2CD2LC2CD2 like [Source:HGNC Symbol;Acc:HGNC:29000]36280-2.447-0.1611No
138WEE1WEE1 G2 checkpoint kinase [Source:HGNC Symbol;Acc:HGNC:12761]36455-2.653-0.1463No
139PLEKHO1pleckstrin homology domain containing O1 [Source:HGNC Symbol;Acc:HGNC:24310]36660-2.966-0.1300No
140OGFRL1opioid growth factor receptor like 1 [Source:HGNC Symbol;Acc:HGNC:21378]36734-3.109-0.1091No
141ATP13A2ATPase cation transporting 13A2 [Source:HGNC Symbol;Acc:HGNC:30213]36833-3.366-0.0870No
142ITGA4integrin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6140]37018-4.063-0.0621No
143ADRB2adrenoceptor beta 2 [Source:HGNC Symbol;Acc:HGNC:286]37036-4.226-0.0314No
144TMEM51transmembrane protein 51 [Source:HGNC Symbol;Acc:HGNC:25488]37069-4.4700.0006No
Table: GSEA details [plain text format]



Fig 2: BMI1_DN_MEL18_DN.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: BMI1_DN_MEL18_DN.V1_UP: Random ES distribution   
Gene set null distribution of ES for BMI1_DN_MEL18_DN.V1_UP