Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetBRCA1_DN.V1_DN
Enrichment Score (ES)-0.6094835
Normalized Enrichment Score (NES)-1.3301705
Nominal p-value0.018538713
FDR q-value0.14194134
FWER p-Value0.936
Table: GSEA Results Summary



Fig 1: Enrichment plot: BRCA1_DN.V1_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IFI35interferon induced protein 35 [Source:HGNC Symbol;Acc:HGNC:5399]1143.3710.0336No
2RSAD2radical S-adenosyl methionine domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30908]4982.0810.0459No
3MX2MX dynamin like GTPase 2 [Source:HGNC Symbol;Acc:HGNC:7533]6471.8460.0619No
4CYTH3cytohesin 3 [Source:HGNC Symbol;Acc:HGNC:9504]13441.2460.0567No
5CCDC106coiled-coil domain containing 106 [Source:HGNC Symbol;Acc:HGNC:30181]14441.1790.0668No
6CDC42EP2CDC42 effector protein 2 [Source:HGNC Symbol;Acc:HGNC:16263]15531.1340.0762No
7CNIH4cornichon family AMPA receptor auxiliary protein 4 [Source:HGNC Symbol;Acc:HGNC:25013]16841.0720.0844No
8SPHK2sphingosine kinase 2 [Source:HGNC Symbol;Acc:HGNC:18859]17151.0540.0950No
9VAMP3vesicle associated membrane protein 3 [Source:HGNC Symbol;Acc:HGNC:12644]20710.9040.0953No
10ARF1P1ADP ribosylation factor 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:22500]24090.7890.0947No
11ZNF253zinc finger protein 253 [Source:HGNC Symbol;Acc:HGNC:13497]28370.6720.0905No
12CHD2chromodomain helicase DNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:1917]34020.5360.0811No
13PLBD1phospholipase B domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26215]35810.4960.0816No
14PTH2Rparathyroid hormone 2 receptor [Source:HGNC Symbol;Acc:HGNC:9609]36000.4930.0865No
15KANSL3KAT8 regulatory NSL complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25473]44450.3360.0673No
16ITGB1BP2integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]45020.3260.0694No
17C1orf116chromosome 1 open reading frame 116 [Source:HGNC Symbol;Acc:HGNC:28667]45130.3240.0726No
18ZNF668zinc finger protein 668 [Source:HGNC Symbol;Acc:HGNC:25821]48100.2760.0676No
19KLHL11kelch like family member 11 [Source:HGNC Symbol;Acc:HGNC:19008]53630.1820.0546No
20GATAD2AGATA zinc finger domain containing 2A [Source:HGNC Symbol;Acc:HGNC:29989]53940.1770.0558No
21NDOR1NADPH dependent diflavin oxidoreductase 1 [Source:HGNC Symbol;Acc:HGNC:29838]54530.1680.0560No
22PROX1prospero homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9459]57210.1340.0502No
23PCDHGB6protocadherin gamma subfamily B, 6 [Source:HGNC Symbol;Acc:HGNC:8713]58590.1120.0478No
24RAPGEF1Rap guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:4568]65470.0020.0292No
25LYVE1lymphatic vessel endothelial hyaluronan receptor 1 [Source:HGNC Symbol;Acc:HGNC:14687]67590.0000.0235No
26FGF22fibroblast growth factor 22 [Source:HGNC Symbol;Acc:HGNC:3679]71200.0000.0137No
27ZRSR2P1ZRSR2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:12456]77340.000-0.0028No
28ASPAaspartoacylase [Source:HGNC Symbol;Acc:HGNC:756]79990.000-0.0100No
29OR7A10olfactory receptor family 7 subfamily A member 10 [Source:HGNC Symbol;Acc:HGNC:8356]83020.000-0.0182No
30WFDC1WAP four-disulfide core domain 1 [Source:HGNC Symbol;Acc:HGNC:15466]83640.000-0.0198No
31DPYSL3dihydropyrimidinase like 3 [Source:HGNC Symbol;Acc:HGNC:3015]93510.000-0.0465No
32KCNQ2potassium voltage-gated channel subfamily Q member 2 [Source:HGNC Symbol;Acc:HGNC:6296]100330.000-0.0649No
33FCER1AFc fragment of IgE receptor Ia [Source:HGNC Symbol;Acc:HGNC:3609]100630.000-0.0657No
34CARD10caspase recruitment domain family member 10 [Source:HGNC Symbol;Acc:HGNC:16422]101010.000-0.0667No
35SPATA31A1SPATA31 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:23394]101180.000-0.0671No
36APOA4apolipoprotein A4 [Source:HGNC Symbol;Acc:HGNC:602]103050.000-0.0722No
37H4C5H4 clustered histone 5 [Source:HGNC Symbol;Acc:HGNC:4790]103400.000-0.0731No
38SUSD5sushi domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29061]103990.000-0.0747No
39PMCHpro-melanin concentrating hormone [Source:HGNC Symbol;Acc:HGNC:9109]104160.000-0.0751No
40KLK15kallikrein related peptidase 15 [Source:HGNC Symbol;Acc:HGNC:20453]106340.000-0.0810No
41SCNN1Dsodium channel epithelial 1 subunit delta [Source:HGNC Symbol;Acc:HGNC:10601]111970.000-0.0962No
42MS4A5membrane spanning 4-domains A5 [Source:HGNC Symbol;Acc:HGNC:13374]112180.000-0.0967No
43LRRC17leucine rich repeat containing 17 [Source:HGNC Symbol;Acc:HGNC:16895]115590.000-0.1059No
44GDF5growth differentiation factor 5 [Source:HGNC Symbol;Acc:HGNC:4220]135590.000-0.1600No
45HAND1heart and neural crest derivatives expressed 1 [Source:HGNC Symbol;Acc:HGNC:4807]138260.000-0.1672No
46IL19interleukin 19 [Source:HGNC Symbol;Acc:HGNC:5990]139340.000-0.1701No
47PCDHB1protocadherin beta 1 [Source:HGNC Symbol;Acc:HGNC:8680]141100.000-0.1748No
48EFNA5ephrin A5 [Source:HGNC Symbol;Acc:HGNC:3225]144560.000-0.1842No
49HSD11B2hydroxysteroid 11-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5209]145380.000-0.1864No
50MC4Rmelanocortin 4 receptor [Source:HGNC Symbol;Acc:HGNC:6932]157540.000-0.2192No
51SCN10Asodium voltage-gated channel alpha subunit 10 [Source:HGNC Symbol;Acc:HGNC:10582]158470.000-0.2217No
52XCL1X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:10645]159410.000-0.2243No
53DLK2delta like non-canonical Notch ligand 2 [Source:HGNC Symbol;Acc:HGNC:21113]167590.000-0.2464No
54TMPRSS11Dtransmembrane serine protease 11D [Source:HGNC Symbol;Acc:HGNC:24059]174890.000-0.2661No
55STX10syntaxin 10 [Source:HGNC Symbol;Acc:HGNC:11428]177250.000-0.2725No
56PDLIM3PDZ and LIM domain 3 [Source:HGNC Symbol;Acc:HGNC:20767]177980.000-0.2744No
57NYXnyctalopin [Source:HGNC Symbol;Acc:HGNC:8082]195240.000-0.3211No
58GNRH2gonadotropin releasing hormone 2 [Source:HGNC Symbol;Acc:HGNC:4420]197760.000-0.3279No
59GABRB3gamma-aminobutyric acid type A receptor subunit beta3 [Source:HGNC Symbol;Acc:HGNC:4083]199520.000-0.3326No
60CYSLTR2cysteinyl leukotriene receptor 2 [Source:HGNC Symbol;Acc:HGNC:18274]200170.000-0.3343No
61CLCA3Pchloride channel accessory 3, pseudogene [Source:HGNC Symbol;Acc:HGNC:2017]220040.000-0.3881No
62CA14carbonic anhydrase 14 [Source:HGNC Symbol;Acc:HGNC:1372]221250.000-0.3913No
63TCF7L1transcription factor 7 like 1 [Source:HGNC Symbol;Acc:HGNC:11640]228810.000-0.4118No
64CD80CD80 molecule [Source:HGNC Symbol;Acc:HGNC:1700]232430.000-0.4215No
65MEOX2mesenchyme homeobox 2 [Source:HGNC Symbol;Acc:HGNC:7014]234940.000-0.4283No
66COLQcollagen like tail subunit of asymmetric acetylcholinesterase [Source:HGNC Symbol;Acc:HGNC:2226]235200.000-0.4290No
67EXD3exonuclease 3'-5' domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26023]242300.000-0.4482No
68NRGNneurogranin [Source:HGNC Symbol;Acc:HGNC:8000]243670.000-0.4518No
69NPFFR1neuropeptide FF receptor 1 [Source:HGNC Symbol;Acc:HGNC:17425]244350.000-0.4536No
70AMBNameloblastin [Source:HGNC Symbol;Acc:HGNC:452]247930.000-0.4633No
71HAO2hydroxyacid oxidase 2 [Source:HGNC Symbol;Acc:HGNC:4810]250970.000-0.4715No
72CTSWcathepsin W [Source:HGNC Symbol;Acc:HGNC:2546]252720.000-0.4762No
73SLC3A1solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]255710.000-0.4843No
74FGF9fibroblast growth factor 9 [Source:HGNC Symbol;Acc:HGNC:3687]256760.000-0.4871No
75SMPXsmall muscle protein X-linked [Source:HGNC Symbol;Acc:HGNC:11122]257430.000-0.4889No
76CD79ACD79a molecule [Source:HGNC Symbol;Acc:HGNC:1698]258040.000-0.4905No
77SLC5A1solute carrier family 5 member 1 [Source:HGNC Symbol;Acc:HGNC:11036]259880.000-0.4955No
78CES1P1carboxylesterase 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:18546]267450.000-0.5159No
79PNMA3PNMA family member 3 [Source:HGNC Symbol;Acc:HGNC:18742]267810.000-0.5169No
80ITIH3inter-alpha-trypsin inhibitor heavy chain 3 [Source:HGNC Symbol;Acc:HGNC:6168]272000.000-0.5282No
81FOXJ1forkhead box J1 [Source:HGNC Symbol;Acc:HGNC:3816]27820-0.005-0.5449No
82TRAF3TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]28030-0.036-0.5501No
83PPP1R9Aprotein phosphatase 1 regulatory subunit 9A [Source:HGNC Symbol;Acc:HGNC:14946]28034-0.037-0.5498No
84BMPR1Bbone morphogenetic protein receptor type 1B [Source:HGNC Symbol;Acc:HGNC:1077]28186-0.061-0.5532No
85ZNF32zinc finger protein 32 [Source:HGNC Symbol;Acc:HGNC:13095]28386-0.087-0.5577No
86GREB1LGREB1 like retinoic acid receptor coactivator [Source:HGNC Symbol;Acc:HGNC:31042]28478-0.102-0.5590No
87OLFML2Bolfactomedin like 2B [Source:HGNC Symbol;Acc:HGNC:24558]28644-0.123-0.5621No
88KMT2Dlysine methyltransferase 2D [Source:HGNC Symbol;Acc:HGNC:7133]28719-0.134-0.5627No
89GRIP1glutamate receptor interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:18708]28791-0.143-0.5631No
90SLC5A2solute carrier family 5 member 2 [Source:HGNC Symbol;Acc:HGNC:11037]28859-0.152-0.5632No
91TLCD3ATLC domain containing 3A [Source:HGNC Symbol;Acc:HGNC:29646]29049-0.179-0.5664No
92ICAM4intercellular adhesion molecule 4 (Landsteiner-Wiener blood group) [Source:HGNC Symbol;Acc:HGNC:5347]29537-0.248-0.5769No
93SNAI1snail family transcriptional repressor 1 [Source:HGNC Symbol;Acc:HGNC:11128]29672-0.267-0.5776No
94RBP4retinol binding protein 4 [Source:HGNC Symbol;Acc:HGNC:9922]30083-0.328-0.5851No
95HHAThedgehog acyltransferase [Source:HGNC Symbol;Acc:HGNC:18270]30316-0.357-0.5875No
96VPS50VPS50 subunit of EARP/GARPII complex [Source:HGNC Symbol;Acc:HGNC:25956]30695-0.416-0.5932No
97ZMYND10zinc finger MYND-type containing 10 [Source:HGNC Symbol;Acc:HGNC:19412]30965-0.458-0.5955No
98GPTglutamic--pyruvic transaminase [Source:HGNC Symbol;Acc:HGNC:4552]31482-0.542-0.6036Yes
99H4C2H4 clustered histone 2 [Source:HGNC Symbol;Acc:HGNC:4789]31523-0.549-0.5987Yes
100INPP5Jinositol polyphosphate-5-phosphatase J [Source:HGNC Symbol;Acc:HGNC:8956]31712-0.581-0.5975Yes
101GPR157G protein-coupled receptor 157 [Source:HGNC Symbol;Acc:HGNC:23687]31717-0.582-0.5912Yes
102GSDMDgasdermin D [Source:HGNC Symbol;Acc:HGNC:25697]31813-0.600-0.5873Yes
103ICMTisoprenylcysteine carboxyl methyltransferase [Source:HGNC Symbol;Acc:HGNC:5350]31936-0.625-0.5838Yes
104CDK11Acyclin dependent kinase 11A [Source:HGNC Symbol;Acc:HGNC:1730]32561-0.761-0.5924Yes
105PTCD2pentatricopeptide repeat domain 2 [Source:HGNC Symbol;Acc:HGNC:25734]32827-0.828-0.5906Yes
106C14orf93chromosome 14 open reading frame 93 [Source:HGNC Symbol;Acc:HGNC:20162]33075-0.890-0.5876Yes
107CTDSP1CTD small phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:21614]33086-0.893-0.5781Yes
108SNHG20small nucleolar RNA host gene 20 [Source:HGNC Symbol;Acc:HGNC:33099]33277-0.952-0.5729Yes
109EXOC6Bexocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]33368-0.976-0.5647Yes
110PPM1Eprotein phosphatase, Mg2+/Mn2+ dependent 1E [Source:HGNC Symbol;Acc:HGNC:19322]33383-0.982-0.5544Yes
111RAB40CRAB40C, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18285]33602-1.050-0.5489Yes
112SPG21SPG21 abhydrolase domain containing, maspardin [Source:HGNC Symbol;Acc:HGNC:20373]33751-1.093-0.5410Yes
113ZNF124zinc finger protein 124 [Source:HGNC Symbol;Acc:HGNC:12907]33754-1.093-0.5292Yes
114ZBTB44zinc finger and BTB domain containing 44 [Source:HGNC Symbol;Acc:HGNC:25001]33764-1.098-0.5175Yes
115AURKCaurora kinase C [Source:HGNC Symbol;Acc:HGNC:11391]34090-1.207-0.5131Yes
116CRYBG2crystallin beta-gamma domain containing 2 [Source:HGNC Symbol;Acc:HGNC:17295]34264-1.268-0.5040Yes
117C1orf159chromosome 1 open reading frame 159 [Source:HGNC Symbol;Acc:HGNC:26062]34467-1.341-0.4949Yes
118GPR35G protein-coupled receptor 35 [Source:HGNC Symbol;Acc:HGNC:4492]34497-1.353-0.4810Yes
119GNA12G protein subunit alpha 12 [Source:HGNC Symbol;Acc:HGNC:4380]35231-1.693-0.4824Yes
120ERO1Bendoplasmic reticulum oxidoreductase 1 beta [Source:HGNC Symbol;Acc:HGNC:14355]35385-1.769-0.4673Yes
121SCARF1scavenger receptor class F member 1 [Source:HGNC Symbol;Acc:HGNC:16820]35591-1.900-0.4521Yes
122GPR19G protein-coupled receptor 19 [Source:HGNC Symbol;Acc:HGNC:4473]35595-1.902-0.4315Yes
123HTATIP2HIV-1 Tat interactive protein 2 [Source:HGNC Symbol;Acc:HGNC:16637]35767-2.031-0.4141Yes
124INSRinsulin receptor [Source:HGNC Symbol;Acc:HGNC:6091]35873-2.110-0.3939Yes
125MSH5mutS homolog 5 [Source:HGNC Symbol;Acc:HGNC:7328]36023-2.224-0.3738Yes
126LYL1LYL1 basic helix-loop-helix family member [Source:HGNC Symbol;Acc:HGNC:6734]36177-2.350-0.3524Yes
127DPY19L1P1DPY19L1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:22395]36184-2.353-0.3269Yes
128EPB41L5erythrocyte membrane protein band 4.1 like 5 [Source:HGNC Symbol;Acc:HGNC:19819]36209-2.369-0.3018Yes
129CYSLTR1cysteinyl leukotriene receptor 1 [Source:HGNC Symbol;Acc:HGNC:17451]36492-2.706-0.2800Yes
130HMGB3P30high mobility group box 3 pseudogene 30 [Source:HGNC Symbol;Acc:HGNC:39333]36516-2.748-0.2507Yes
131TMEM143transmembrane protein 143 [Source:HGNC Symbol;Acc:HGNC:25603]36607-2.888-0.2217Yes
132PLEKHO1pleckstrin homology domain containing O1 [Source:HGNC Symbol;Acc:HGNC:24310]36660-2.966-0.1909Yes
133BRCA1BRCA1 DNA repair associated [Source:HGNC Symbol;Acc:HGNC:1100]36830-3.352-0.1590Yes
134SMOsmoothened, frizzled class receptor [Source:HGNC Symbol;Acc:HGNC:11119]36928-3.672-0.1217Yes
135E2F2E2F transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:3114]36937-3.731-0.0813Yes
136GM2AGM2 ganglioside activator [Source:HGNC Symbol;Acc:HGNC:4367]36963-3.822-0.0404Yes
137ATP4AATPase H+/K+ transporting subunit alpha [Source:HGNC Symbol;Acc:HGNC:819]37008-4.0250.0022Yes
Table: GSEA details [plain text format]



Fig 2: BRCA1_DN.V1_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: BRCA1_DN.V1_DN: Random ES distribution   
Gene set null distribution of ES for BRCA1_DN.V1_DN