Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetCSR_EARLY_UP.V1_DN
Enrichment Score (ES)-0.644994
Normalized Enrichment Score (NES)-1.3961594
Nominal p-value0.004530011
FDR q-value0.08191111
FWER p-Value0.572
Table: GSEA Results Summary



Fig 1: Enrichment plot: CSR_EARLY_UP.V1_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1STAT2signal transducer and activator of transcription 2 [Source:HGNC Symbol;Acc:HGNC:11363]4062.2520.0113No
2MINDY1MINDY lysine 48 deubiquitinase 1 [Source:HGNC Symbol;Acc:HGNC:25648]8491.6100.0154No
3ZNF585Bzinc finger protein 585B [Source:HGNC Symbol;Acc:HGNC:30948]10111.4650.0255No
4IP6K2inositol hexakisphosphate kinase 2 [Source:HGNC Symbol;Acc:HGNC:17313]11101.3900.0367No
5GRHL1grainyhead like transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:17923]13651.2300.0420No
6IFIT2interferon induced protein with tetratricopeptide repeats 2 [Source:HGNC Symbol;Acc:HGNC:5409]16331.0950.0456No
7APBB3amyloid beta precursor protein binding family B member 3 [Source:HGNC Symbol;Acc:HGNC:20708]18710.9900.0490No
8NR1H3nuclear receptor subfamily 1 group H member 3 [Source:HGNC Symbol;Acc:HGNC:7966]26210.7270.0360No
9DHRS3dehydrogenase/reductase 3 [Source:HGNC Symbol;Acc:HGNC:17693]26500.7170.0423No
10CC2D1Acoiled-coil and C2 domain containing 1A [Source:HGNC Symbol;Acc:HGNC:30237]27710.6890.0459No
11TRIM56tripartite motif containing 56 [Source:HGNC Symbol;Acc:HGNC:19028]30960.6090.0432No
12LTN1listerin E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:13082]34490.5250.0389No
13NDNFneuron derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:26256]37420.4630.0356No
14RNF20ring finger protein 20 [Source:HGNC Symbol;Acc:HGNC:10062]38530.4440.0370No
15LRIG2leucine rich repeats and immunoglobulin like domains 2 [Source:HGNC Symbol;Acc:HGNC:20889]39000.4350.0400No
16DENND11DENN domain containing 11 [Source:HGNC Symbol;Acc:HGNC:29472]46260.3080.0235No
17FBXO38F-box protein 38 [Source:HGNC Symbol;Acc:HGNC:28844]50690.2310.0138No
18ELMOD2ELMO domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28111]53120.1900.0092No
19TENT5Cterminal nucleotidyltransferase 5C [Source:HGNC Symbol;Acc:HGNC:24712]55940.1460.0030No
20ZNF33Azinc finger protein 33A [Source:HGNC Symbol;Acc:HGNC:13096]56760.1400.0022No
21SAGS-antigen visual arrestin [Source:HGNC Symbol;Acc:HGNC:10521]63600.029-0.0160No
22DAAM2dishevelled associated activator of morphogenesis 2 [Source:HGNC Symbol;Acc:HGNC:18143]71580.000-0.0375No
23ASPAaspartoacylase [Source:HGNC Symbol;Acc:HGNC:756]79990.000-0.0603No
24PMS2P1PMS1 homolog 2, mismatch repair system component pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:9123]81360.000-0.0639No
25TDRD6tudor domain containing 6 [Source:HGNC Symbol;Acc:HGNC:21339]93060.000-0.0956No
26HSPG2heparan sulfate proteoglycan 2 [Source:HGNC Symbol;Acc:HGNC:5273]104920.000-0.1276No
27GFRA1GDNF family receptor alpha 1 [Source:HGNC Symbol;Acc:HGNC:4243]113840.000-0.1517No
28ERAP2endoplasmic reticulum aminopeptidase 2 [Source:HGNC Symbol;Acc:HGNC:29499]116360.000-0.1585No
29COL1A1collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]130250.000-0.1961No
30GSDMBgasdermin B [Source:HGNC Symbol;Acc:HGNC:23690]133310.000-0.2043No
31CDRT4CMT1A duplicated region transcript 4 [Source:HGNC Symbol;Acc:HGNC:14383]134980.000-0.2088No
32GDF5growth differentiation factor 5 [Source:HGNC Symbol;Acc:HGNC:4220]135590.000-0.2104No
33PDE5Aphosphodiesterase 5A [Source:HGNC Symbol;Acc:HGNC:8784]136480.000-0.2128No
34NYNRINNYN domain and retroviral integrase containing [Source:HGNC Symbol;Acc:HGNC:20165]140930.000-0.2248No
35HOXA10homeobox A10 [Source:HGNC Symbol;Acc:HGNC:5100]144440.000-0.2343No
36STOX1storkhead box 1 [Source:HGNC Symbol;Acc:HGNC:23508]159520.000-0.2751No
37MAB21L1mab-21 like 1 [Source:HGNC Symbol;Acc:HGNC:6757]159600.000-0.2752No
38SLC7A14solute carrier family 7 member 14 [Source:HGNC Symbol;Acc:HGNC:29326]163290.000-0.2852No
39PAPLNpapilin, proteoglycan like sulfated glycoprotein [Source:HGNC Symbol;Acc:HGNC:19262]179480.000-0.3290No
40C14orf132chromosome 14 open reading frame 132 [Source:HGNC Symbol;Acc:HGNC:20346]179660.000-0.3294No
41IGLL1immunoglobulin lambda like polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:5870]184770.000-0.3432No
42SULF1sulfatase 1 [Source:HGNC Symbol;Acc:HGNC:20391]219100.000-0.4361No
43ZNF337zinc finger protein 337 [Source:HGNC Symbol;Acc:HGNC:15809]226240.000-0.4554No
44ZNF302zinc finger protein 302 [Source:HGNC Symbol;Acc:HGNC:13848]226670.000-0.4565No
45CYP2R1cytochrome P450 family 2 subfamily R member 1 [Source:HGNC Symbol;Acc:HGNC:20580]228640.000-0.4618No
46CAVIN2caveolae associated protein 2 [Source:HGNC Symbol;Acc:HGNC:10690]238610.000-0.4887No
47ALDH1A1aldehyde dehydrogenase 1 family member A1 [Source:HGNC Symbol;Acc:HGNC:402]259450.000-0.5451No
48SNPHsyntaphilin [Source:HGNC Symbol;Acc:HGNC:15931]261040.000-0.5494No
49NSUN5P2NSUN5 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:16609]262970.000-0.5546No
50PLCD1phospholipase C delta 1 [Source:HGNC Symbol;Acc:HGNC:9060]263490.000-0.5559No
51XAF1XIAP associated factor 1 [Source:HGNC Symbol;Acc:HGNC:30932]275390.000-0.5881No
52SLC9A7solute carrier family 9 member A7 [Source:HGNC Symbol;Acc:HGNC:17123]28400-0.089-0.6105No
53RABGAP1RAB GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:17155]28454-0.098-0.6110No
54ZFP64ZFP64 zinc finger protein [Source:HGNC Symbol;Acc:HGNC:15940]28480-0.102-0.6106No
55TCAIMT cell activation inhibitor, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25241]28587-0.115-0.6123No
56CROCCP2CROCC pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:28170]28611-0.120-0.6118No
57SLC25A46solute carrier family 25 member 46 [Source:HGNC Symbol;Acc:HGNC:25198]28650-0.124-0.6116No
58MSRB1methionine sulfoxide reductase B1 [Source:HGNC Symbol;Acc:HGNC:14133]28918-0.158-0.6172No
59EIF4EBP3eukaryotic translation initiation factor 4E binding protein 3 [Source:HGNC Symbol;Acc:HGNC:3290]29614-0.260-0.6335No
60PHIPpleckstrin homology domain interacting protein [Source:HGNC Symbol;Acc:HGNC:15673]29658-0.264-0.6320No
61STX16syntaxin 16 [Source:HGNC Symbol;Acc:HGNC:11431]29660-0.265-0.6294No
62PRRT2proline rich transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:30500]29771-0.286-0.6295No
63RAPGEF3Rap guanine nucleotide exchange factor 3 [Source:HGNC Symbol;Acc:HGNC:16629]29950-0.310-0.6313No
64TAF15TATA-box binding protein associated factor 15 [Source:HGNC Symbol;Acc:HGNC:11547]30393-0.368-0.6396No
65ATF7IPactivating transcription factor 7 interacting protein [Source:HGNC Symbol;Acc:HGNC:20092]30594-0.400-0.6410Yes
66ZFYVE1zinc finger FYVE-type containing 1 [Source:HGNC Symbol;Acc:HGNC:13180]30631-0.407-0.6380Yes
67GTPBP8GTP binding protein 8 (putative) [Source:HGNC Symbol;Acc:HGNC:25007]30727-0.421-0.6364Yes
68ADAMTSL4ADAMTS like 4 [Source:HGNC Symbol;Acc:HGNC:19706]30861-0.443-0.6356Yes
69USP33ubiquitin specific peptidase 33 [Source:HGNC Symbol;Acc:HGNC:20059]30902-0.449-0.6322Yes
70ELMOD3ELMO domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26158]30927-0.452-0.6284Yes
71PEX6peroxisomal biogenesis factor 6 [Source:HGNC Symbol;Acc:HGNC:8859]31117-0.479-0.6287Yes
72KBTBD6kelch repeat and BTB domain containing 6 [Source:HGNC Symbol;Acc:HGNC:25340]31228-0.500-0.6267Yes
73MOSPD2motile sperm domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28381]31257-0.504-0.6225Yes
74HEBP2heme binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15716]31296-0.509-0.6185Yes
75ZNF226zinc finger protein 226 [Source:HGNC Symbol;Acc:HGNC:13019]31355-0.519-0.6149Yes
76ZNF500zinc finger protein 500 [Source:HGNC Symbol;Acc:HGNC:23716]31417-0.530-0.6113Yes
77STC2stanniocalcin 2 [Source:HGNC Symbol;Acc:HGNC:11374]31438-0.533-0.6066Yes
78ARL4DADP ribosylation factor like GTPase 4D [Source:HGNC Symbol;Acc:HGNC:656]31623-0.565-0.6059Yes
79DXOdecapping exoribonuclease [Source:HGNC Symbol;Acc:HGNC:2992]31698-0.577-0.6022Yes
80TFAP2Atranscription factor AP-2 alpha [Source:HGNC Symbol;Acc:HGNC:11742]31952-0.630-0.6028Yes
81NATD1N-acetyltransferase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30770]32193-0.681-0.6025Yes
82ABCC10ATP binding cassette subfamily C member 10 [Source:HGNC Symbol;Acc:HGNC:52]32286-0.701-0.5981Yes
83ALDH3B2aldehyde dehydrogenase 3 family member B2 [Source:HGNC Symbol;Acc:HGNC:411]32549-0.757-0.5977Yes
84PAN2poly(A) specific ribonuclease subunit PAN2 [Source:HGNC Symbol;Acc:HGNC:20074]32622-0.776-0.5919Yes
85SIX1SIX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:10887]32727-0.805-0.5868Yes
86SKP2S-phase kinase associated protein 2 [Source:HGNC Symbol;Acc:HGNC:10901]32857-0.837-0.5819Yes
87LRRK2leucine rich repeat kinase 2 [Source:HGNC Symbol;Acc:HGNC:18618]32917-0.851-0.5751Yes
88UBN2ubinuclein 2 [Source:HGNC Symbol;Acc:HGNC:21931]32997-0.872-0.5686Yes
89YEATS2YEATS domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25489]33114-0.902-0.5628Yes
90ZNF467zinc finger protein 467 [Source:HGNC Symbol;Acc:HGNC:23154]33268-0.950-0.5575Yes
91AMTaminomethyltransferase [Source:HGNC Symbol;Acc:HGNC:473]33336-0.967-0.5497Yes
92AKIP1A-kinase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:1170]33559-1.038-0.5454Yes
93LRIG3leucine rich repeats and immunoglobulin like domains 3 [Source:HGNC Symbol;Acc:HGNC:30991]33655-1.065-0.5374Yes
94SLC16A7solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]34000-1.185-0.5350Yes
95ACBD4acyl-CoA binding domain containing 4 [Source:HGNC Symbol;Acc:HGNC:23337]34140-1.222-0.5266Yes
96UFSP2UFM1 specific peptidase 2 [Source:HGNC Symbol;Acc:HGNC:25640]34212-1.249-0.5162Yes
97CIRBPcold inducible RNA binding protein [Source:HGNC Symbol;Acc:HGNC:1982]34508-1.357-0.5107Yes
98BRD8bromodomain containing 8 [Source:HGNC Symbol;Acc:HGNC:19874]34513-1.359-0.4973Yes
99DDX17DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]34515-1.360-0.4839Yes
100LDB1LIM domain binding 1 [Source:HGNC Symbol;Acc:HGNC:6532]34611-1.397-0.4726Yes
101OTUD1OTU deubiquitinase 1 [Source:HGNC Symbol;Acc:HGNC:27346]34656-1.411-0.4598Yes
102POLLDNA polymerase lambda [Source:HGNC Symbol;Acc:HGNC:9184]34660-1.414-0.4458Yes
103FBXO25F-box protein 25 [Source:HGNC Symbol;Acc:HGNC:13596]34859-1.492-0.4364Yes
104ADMadrenomedullin [Source:HGNC Symbol;Acc:HGNC:259]34931-1.530-0.4232Yes
105DCP1Bdecapping mRNA 1B [Source:HGNC Symbol;Acc:HGNC:24451]35007-1.568-0.4096Yes
106MRI1methylthioribose-1-phosphate isomerase 1 [Source:HGNC Symbol;Acc:HGNC:28469]35053-1.599-0.3950Yes
107ARRDC3arrestin domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29263]35126-1.640-0.3807Yes
108NMT2N-myristoyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:7858]35145-1.649-0.3648Yes
109NDUFAF7NADH:ubiquinone oxidoreductase complex assembly factor 7 [Source:HGNC Symbol;Acc:HGNC:28816]35241-1.698-0.3505Yes
110ALDH1L2aldehyde dehydrogenase 1 family member L2 [Source:HGNC Symbol;Acc:HGNC:26777]35374-1.763-0.3366Yes
111C2CD5C2 calcium dependent domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29062]35458-1.813-0.3209Yes
112ING4inhibitor of growth family member 4 [Source:HGNC Symbol;Acc:HGNC:19423]35648-1.936-0.3068Yes
113ACYP1acylphosphatase 1 [Source:HGNC Symbol;Acc:HGNC:179]35704-1.980-0.2887Yes
114SIX5SIX homeobox 5 [Source:HGNC Symbol;Acc:HGNC:10891]35707-1.981-0.2691Yes
115CDKN1Bcyclin dependent kinase inhibitor 1B [Source:HGNC Symbol;Acc:HGNC:1785]35764-2.028-0.2505Yes
116ANKZF1ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 [Source:HGNC Symbol;Acc:HGNC:25527]35803-2.063-0.2311Yes
117MPPE1metallophosphoesterase 1 [Source:HGNC Symbol;Acc:HGNC:15988]35911-2.142-0.2127Yes
118CKBcreatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]35929-2.153-0.1918Yes
119FZD2frizzled class receptor 2 [Source:HGNC Symbol;Acc:HGNC:4040]36171-2.345-0.1751Yes
120TXNIPthioredoxin interacting protein [Source:HGNC Symbol;Acc:HGNC:16952]36328-2.503-0.1545Yes
121HBP1HMG-box transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:23200]36337-2.510-0.1298Yes
122WEE1WEE1 G2 checkpoint kinase [Source:HGNC Symbol;Acc:HGNC:12761]36455-2.653-0.1067Yes
123BBC3BCL2 binding component 3 [Source:HGNC Symbol;Acc:HGNC:17868]36586-2.867-0.0818Yes
124NPHP3nephrocystin 3 [Source:HGNC Symbol;Acc:HGNC:7907]36606-2.886-0.0537Yes
125FUT10fucosyltransferase 10 [Source:HGNC Symbol;Acc:HGNC:19234]36807-3.288-0.0265Yes
126ACCS1-aminocyclopropane-1-carboxylate synthase homolog (inactive) [Source:HGNC Symbol;Acc:HGNC:23989]36852-3.4390.0064Yes
Table: GSEA details [plain text format]



Fig 2: CSR_EARLY_UP.V1_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CSR_EARLY_UP.V1_DN: Random ES distribution   
Gene set null distribution of ES for CSR_EARLY_UP.V1_DN