Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_GAQ
GeneSetKRAS.BREAST_UP.V1_UP
Enrichment Score (ES)0.50027907
Normalized Enrichment Score (NES)1.3154889
Nominal p-value0.008695652
FDR q-value0.09082104
FWER p-Value0.387
Table: GSEA Results Summary



Fig 1: Enrichment plot: KRAS.BREAST_UP.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IL1Binterleukin 1 beta [Source:HGNC Symbol;Acc:HGNC:5992]04.9890.0770Yes
2TRAF1TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]913.5720.1296Yes
3GLRXglutaredoxin [Source:HGNC Symbol;Acc:HGNC:4330]1483.1740.1771Yes
4IL13RA2interleukin 13 receptor subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:5975]1693.0640.2238Yes
5TNFAIP3TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]2402.7670.2646Yes
6IL1RL1interleukin 1 receptor like 1 [Source:HGNC Symbol;Acc:HGNC:5998]2412.7560.3072Yes
7SYPsynaptophysin [Source:HGNC Symbol;Acc:HGNC:11506]2872.6010.3461Yes
8DHRS9dehydrogenase/reductase 9 [Source:HGNC Symbol;Acc:HGNC:16888]5152.0550.3716Yes
9LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]7111.7790.3938Yes
10PRDM1PR/SET domain 1 [Source:HGNC Symbol;Acc:HGNC:9346]7791.6890.4181Yes
11MMP9matrix metallopeptidase 9 [Source:HGNC Symbol;Acc:HGNC:7176]8251.6300.4420Yes
12ACP3acid phosphatase 3 [Source:HGNC Symbol;Acc:HGNC:125]9451.5210.4622Yes
13IL2RGinterleukin 2 receptor subunit gamma [Source:HGNC Symbol;Acc:HGNC:6010]13101.2670.4719Yes
14CXCL2C-X-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:4603]17281.0500.4768Yes
15SPRY2sprouty RTK signaling antagonist 2 [Source:HGNC Symbol;Acc:HGNC:11270]18181.0090.4900Yes
16FCRL2Fc receptor like 2 [Source:HGNC Symbol;Acc:HGNC:14875]19790.9460.5003Yes
17AKAP12A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]35400.5050.4658No
18CXCL3C-X-C motif chemokine ligand 3 [Source:HGNC Symbol;Acc:HGNC:4604]39100.4340.4626No
19BAIAP3BAI1 associated protein 3 [Source:HGNC Symbol;Acc:HGNC:948]42890.3640.4579No
20DNAJA4DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]46850.2990.4519No
21MKRN3makorin ring finger protein 3 [Source:HGNC Symbol;Acc:HGNC:7114]48660.2660.4511No
22KCNJ14potassium inwardly rectifying channel subfamily J member 14 [Source:HGNC Symbol;Acc:HGNC:6260]48970.2580.4543No
23BIRC3baculoviral IAP repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:591]50080.2420.4550No
24TAGLN3transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]53890.1780.4475No
25TLR8toll like receptor 8 [Source:HGNC Symbol;Acc:HGNC:15632]57080.1360.4410No
26TAPT1transmembrane anterior posterior transformation 1 [Source:HGNC Symbol;Acc:HGNC:26887]60740.0840.4324No
27CCL16C-C motif chemokine ligand 16 [Source:HGNC Symbol;Acc:HGNC:10614]66200.0000.4176No
28CCL22C-C motif chemokine ligand 22 [Source:HGNC Symbol;Acc:HGNC:10621]66270.0000.4175No
29SCG5secretogranin V [Source:HGNC Symbol;Acc:HGNC:10816]67750.0000.4135No
30DEFB4Adefensin beta 4A [Source:HGNC Symbol;Acc:HGNC:2767]74040.0000.3965No
31ADAMDEC1ADAM like decysin 1 [Source:HGNC Symbol;Acc:HGNC:16299]74260.0000.3959No
32MAPK4mitogen-activated protein kinase 4 [Source:HGNC Symbol;Acc:HGNC:6878]86630.0000.3625No
33OPRPNopiorphin prepropeptide [Source:HGNC Symbol;Acc:HGNC:17279]86930.0000.3617No
34CYB5R2cytochrome b5 reductase 2 [Source:HGNC Symbol;Acc:HGNC:24376]86980.0000.3616No
35PRRX1paired related homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9142]88110.0000.3585No
36CALB1calbindin 1 [Source:HGNC Symbol;Acc:HGNC:1434]89690.0000.3543No
37SOX17SRY-box transcription factor 17 [Source:HGNC Symbol;Acc:HGNC:18122]89920.0000.3537No
38CLSTN2calsyntenin 2 [Source:HGNC Symbol;Acc:HGNC:17448]90840.0000.3512No
39CDK2AP2P3cyclin dependent kinase 2 associated protein 2 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:38494]98690.0000.3300No
40KCNA2potassium voltage-gated channel subfamily A member 2 [Source:HGNC Symbol;Acc:HGNC:6220]98880.0000.3295No
41NPAS1neuronal PAS domain protein 1 [Source:HGNC Symbol;Acc:HGNC:7894]99640.0000.3275No
42KCNK3potassium two pore domain channel subfamily K member 3 [Source:HGNC Symbol;Acc:HGNC:6278]100170.0000.3261No
43FAM30Afamily with sequence similarity 30 member A [Source:HGNC Symbol;Acc:HGNC:19955]100510.0000.3252No
44SPRR2Bsmall proline rich protein 2B [Source:HGNC Symbol;Acc:HGNC:11262]103600.0000.3169No
45IL1RAPL1interleukin 1 receptor accessory protein like 1 [Source:HGNC Symbol;Acc:HGNC:5996]105780.0000.3110No
46ERC2-IT1ERC2 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:1229]106090.0000.3102No
47KLK12kallikrein related peptidase 12 [Source:HGNC Symbol;Acc:HGNC:6360]106370.0000.3095No
48KCNA10potassium voltage-gated channel subfamily A member 10 [Source:HGNC Symbol;Acc:HGNC:6219]109780.0000.3003No
49PPBPpro-platelet basic protein [Source:HGNC Symbol;Acc:HGNC:9240]111310.0000.2961No
50ACKR4atypical chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:1611]112480.0000.2930No
51GPR37L1G protein-coupled receptor 37 like 1 [Source:HGNC Symbol;Acc:HGNC:14923]113570.0000.2901No
52PRB4proline rich protein BstNI subfamily 4 [Source:HGNC Symbol;Acc:HGNC:9340]116030.0000.2835No
53USH2Ausherin [Source:HGNC Symbol;Acc:HGNC:12601]116390.0000.2825No
54TMPRSS4transmembrane serine protease 4 [Source:HGNC Symbol;Acc:HGNC:11878]116960.0000.2810No
55CLPScolipase [Source:HGNC Symbol;Acc:HGNC:2085]118340.0000.2773No
56IGFBP3insulin like growth factor binding protein 3 [Source:HGNC Symbol;Acc:HGNC:5472]119240.0000.2749No
57PSCAprostate stem cell antigen [Source:HGNC Symbol;Acc:HGNC:9500]119400.0000.2745No
58CMA1chymase 1 [Source:HGNC Symbol;Acc:HGNC:2097]119630.0000.2739No
59ESM1endothelial cell specific molecule 1 [Source:HGNC Symbol;Acc:HGNC:3466]120370.0000.2719No
60ETV2ETS variant transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:3491]124600.0000.2605No
61IGF2insulin like growth factor 2 [Source:HGNC Symbol;Acc:HGNC:5466]126070.0000.2565No
62TAAR5trace amine associated receptor 5 [Source:HGNC Symbol;Acc:HGNC:30236]127420.0000.2529No
63GULP1GULP PTB domain containing engulfment adaptor 1 [Source:HGNC Symbol;Acc:HGNC:18649]132880.0000.2382No
64OR2C1olfactory receptor family 2 subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:8242]136150.0000.2293No
65PDE3Bphosphodiesterase 3B [Source:HGNC Symbol;Acc:HGNC:8779]136310.0000.2289No
66IL37interleukin 37 [Source:HGNC Symbol;Acc:HGNC:15563]139750.0000.2196No
67EFNA5ephrin A5 [Source:HGNC Symbol;Acc:HGNC:3225]144560.0000.2066No
68HSD11B1hydroxysteroid 11-beta dehydrogenase 1 [Source:HGNC Symbol;Acc:HGNC:5208]145370.0000.2045No
69ZP4zona pellucida glycoprotein 4 [Source:HGNC Symbol;Acc:HGNC:15770]149160.0000.1943No
70IL17RBinterleukin 17 receptor B [Source:HGNC Symbol;Acc:HGNC:18015]152070.0000.1864No
71SPINK1serine peptidase inhibitor Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]155600.0000.1769No
72IL1R2interleukin 1 receptor type 2 [Source:HGNC Symbol;Acc:HGNC:5994]159710.0000.1658No
73AMELYamelogenin Y-linked [Source:HGNC Symbol;Acc:HGNC:462]160700.0000.1631No
74MGLLmonoglyceride lipase [Source:HGNC Symbol;Acc:HGNC:17038]172080.0000.1324No
75CEACAM3CEA cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:1815]179340.0000.1127No
76SPON2spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]189820.0000.0844No
77COL9A1collagen type IX alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2217]190090.0000.0837No
78BMP6bone morphogenetic protein 6 [Source:HGNC Symbol;Acc:HGNC:1073]190990.0000.0813No
79NRLneural retina leucine zipper [Source:HGNC Symbol;Acc:HGNC:8002]194070.0000.0730No
80HSD17B2hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]198000.0000.0624No
81GABRA3gamma-aminobutyric acid type A receptor subunit alpha3 [Source:HGNC Symbol;Acc:HGNC:4077]200000.0000.0570No
82NR1H4nuclear receptor subfamily 1 group H member 4 [Source:HGNC Symbol;Acc:HGNC:7967]200010.0000.0570No
83KLK6kallikrein related peptidase 6 [Source:HGNC Symbol;Acc:HGNC:6367]207000.0000.0381No
84MMP10matrix metallopeptidase 10 [Source:HGNC Symbol;Acc:HGNC:7156]209240.0000.0321No
85GJA8gap junction protein alpha 8 [Source:HGNC Symbol;Acc:HGNC:4281]210080.0000.0298No
86KRT34keratin 34 [Source:HGNC Symbol;Acc:HGNC:6452]220680.0000.0012No
87CRCT1cysteine rich C-terminal 1 [Source:HGNC Symbol;Acc:HGNC:29875]222760.000-0.0044No
88RMSTrhabdomyosarcoma 2 associated transcript [Source:HGNC Symbol;Acc:HGNC:29893]223600.000-0.0067No
89CMKLR1chemerin chemokine-like receptor 1 [Source:HGNC Symbol;Acc:HGNC:2121]225300.000-0.0113No
90KRT33Bkeratin 33B [Source:HGNC Symbol;Acc:HGNC:6451]227780.000-0.0179No
91RBMY2FPRNA binding motif protein Y-linked family 2 member F, pseudogene [Source:HGNC Symbol;Acc:HGNC:23891]230770.000-0.0260No
92ANKRD36BP2ankyrin repeat domain 36B pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:33607]232090.000-0.0295No
93NPPBnatriuretic peptide B [Source:HGNC Symbol;Acc:HGNC:7940]238760.000-0.0476No
94KCNJ16potassium inwardly rectifying channel subfamily J member 16 [Source:HGNC Symbol;Acc:HGNC:6262]240840.000-0.0532No
95SNAP25synaptosome associated protein 25 [Source:HGNC Symbol;Acc:HGNC:11132]243640.000-0.0607No
96SPACA1sperm acrosome associated 1 [Source:HGNC Symbol;Acc:HGNC:14967]243800.000-0.0611No
97KCNK15potassium two pore domain channel subfamily K member 15 [Source:HGNC Symbol;Acc:HGNC:13814]244460.000-0.0629No
98ALPPalkaline phosphatase, placental [Source:HGNC Symbol;Acc:HGNC:439]245640.000-0.0661No
99FAM155Bfamily with sequence similarity 155 member B [Source:HGNC Symbol;Acc:HGNC:30701]246400.000-0.0681No
100ADGRD2adhesion G protein-coupled receptor D2 [Source:HGNC Symbol;Acc:HGNC:18651]246430.000-0.0681No
101CSF2colony stimulating factor 2 [Source:HGNC Symbol;Acc:HGNC:2434]247240.000-0.0703No
102WNT16Wnt family member 16 [Source:HGNC Symbol;Acc:HGNC:16267]250260.000-0.0784No
103ANO2anoctamin 2 [Source:HGNC Symbol;Acc:HGNC:1183]252920.000-0.0856No
104SMPXsmall muscle protein X-linked [Source:HGNC Symbol;Acc:HGNC:11122]257430.000-0.0978No
105OCA2OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101]263290.000-0.1136No
106A2Malpha-2-macroglobulin [Source:HGNC Symbol;Acc:HGNC:7]272660.000-0.1390No
107FMO2flavin containing dimethylaniline monoxygenase 2 [Source:HGNC Symbol;Acc:HGNC:3770]274270.000-0.1433No
108STC1stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373]276570.000-0.1495No
109TFPItissue factor pathway inhibitor [Source:HGNC Symbol;Acc:HGNC:11760]28092-0.046-0.1605No
110GFI1growth factor independent 1 transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:4237]28114-0.049-0.1603No
111SAMD14sterile alpha motif domain containing 14 [Source:HGNC Symbol;Acc:HGNC:27312]28173-0.059-0.1610No
112ATP12AATPase H+/K+ transporting non-gastric alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:13816]28322-0.080-0.1638No
113HAS2hyaluronan synthase 2 [Source:HGNC Symbol;Acc:HGNC:4819]28337-0.082-0.1629No
114STX1Asyntaxin 1A [Source:HGNC Symbol;Acc:HGNC:11433]28704-0.133-0.1707No
115PCDHGA11protocadherin gamma subfamily A, 11 [Source:HGNC Symbol;Acc:HGNC:8698]28972-0.167-0.1754No
116CTNNA2catenin alpha 2 [Source:HGNC Symbol;Acc:HGNC:2510]29545-0.249-0.1870No
117PPP1R15Aprotein phosphatase 1 regulatory subunit 15A [Source:HGNC Symbol;Acc:HGNC:14375]29686-0.270-0.1866No
118NDUFA4L2NDUFA4 mitochondrial complex associated like 2 [Source:HGNC Symbol;Acc:HGNC:29836]30388-0.367-0.1999No
119CASS4Cas scaffold protein family member 4 [Source:HGNC Symbol;Acc:HGNC:15878]30510-0.384-0.1973No
120CDSNcorneodesmosin [Source:HGNC Symbol;Acc:HGNC:1802]30706-0.418-0.1961No
121COL9A3collagen type IX alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2219]30774-0.428-0.1913No
122CEACAM1CEA cell adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:1814]30784-0.430-0.1849No
123LILRA6leukocyte immunoglobulin like receptor A6 [Source:HGNC Symbol;Acc:HGNC:15495]31036-0.467-0.1845No
124CFAP43cilia and flagella associated protein 43 [Source:HGNC Symbol;Acc:HGNC:26684]31583-0.559-0.1907No
125TERTtelomerase reverse transcriptase [Source:HGNC Symbol;Acc:HGNC:11730]31727-0.584-0.1856No
126S100A5S100 calcium binding protein A5 [Source:HGNC Symbol;Acc:HGNC:10495]32612-0.775-0.1975No
127TMEM176Atransmembrane protein 176A [Source:HGNC Symbol;Acc:HGNC:24930]32868-0.838-0.1915No
128KCNC2potassium voltage-gated channel subfamily C member 2 [Source:HGNC Symbol;Acc:HGNC:6234]33047-0.884-0.1827No
129KCNAB3potassium voltage-gated channel subfamily A regulatory beta subunit 3 [Source:HGNC Symbol;Acc:HGNC:6230]33578-1.042-0.1809No
130NFE2nuclear factor, erythroid 2 [Source:HGNC Symbol;Acc:HGNC:7780]33586-1.043-0.1650No
131H2AC13H2A clustered histone 13 [Source:HGNC Symbol;Acc:HGNC:4725]33922-1.158-0.1562No
132OSGIN1oxidative stress induced growth inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:30093]34201-1.246-0.1445No
133SCELsciellin [Source:HGNC Symbol;Acc:HGNC:10573]34371-1.307-0.1289No
134GSG1germ cell associated 1 [Source:HGNC Symbol;Acc:HGNC:19716]34536-1.365-0.1123No
135PDE2Aphosphodiesterase 2A [Source:HGNC Symbol;Acc:HGNC:8777]35637-1.928-0.1123No
136KIF24kinesin family member 24 [Source:HGNC Symbol;Acc:HGNC:19916]35789-2.051-0.0848No
137LYL1LYL1 basic helix-loop-helix family member [Source:HGNC Symbol;Acc:HGNC:6734]36177-2.350-0.0590No
138MYCNMYCN proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7559]36198-2.363-0.0231No
139KIF5Akinesin family member 5A [Source:HGNC Symbol;Acc:HGNC:6323]36703-3.0590.0105No
Table: GSEA details [plain text format]



Fig 2: KRAS.BREAST_UP.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KRAS.BREAST_UP.V1_UP: Random ES distribution   
Gene set null distribution of ES for KRAS.BREAST_UP.V1_UP