Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_GAQ
GeneSetKRAS.LUNG.BREAST_UP.V1_UP
Enrichment Score (ES)0.55790746
Normalized Enrichment Score (NES)1.4749027
Nominal p-value0.0
FDR q-value0.14181177
FWER p-Value0.115
Table: GSEA Results Summary



Fig 1: Enrichment plot: KRAS.LUNG.BREAST_UP.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PTGS2prostaglandin-endoperoxide synthase 2 [Source:HGNC Symbol;Acc:HGNC:9605]14.9390.0655Yes
2CSF3colony stimulating factor 3 [Source:HGNC Symbol;Acc:HGNC:2438]24.9300.1309Yes
3TRAF1TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]913.5720.1760Yes
4GLRXglutaredoxin [Source:HGNC Symbol;Acc:HGNC:4330]1483.1740.2166Yes
5IL13RA2interleukin 13 receptor subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:5975]1693.0640.2567Yes
6ETS1ETS proto-oncogene 1, transcription factor [Source:HGNC Symbol;Acc:HGNC:3488]2032.8960.2942Yes
7TNFAIP3TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]2402.7670.3300Yes
8IL1RL1interleukin 1 receptor like 1 [Source:HGNC Symbol;Acc:HGNC:5998]2412.7560.3666Yes
9ID2inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]3352.4200.3961Yes
10POLMDNA polymerase mu [Source:HGNC Symbol;Acc:HGNC:9185]5022.0770.4192Yes
11DHRS9dehydrogenase/reductase 9 [Source:HGNC Symbol;Acc:HGNC:16888]5152.0550.4462Yes
12ISG20interferon stimulated exonuclease gene 20 [Source:HGNC Symbol;Acc:HGNC:6130]6411.8570.4674Yes
13LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]7111.7790.4892Yes
14PRDM1PR/SET domain 1 [Source:HGNC Symbol;Acc:HGNC:9346]7791.6890.5098Yes
15MMP9matrix metallopeptidase 9 [Source:HGNC Symbol;Acc:HGNC:7176]8251.6300.5302Yes
16DOCK4dedicator of cytokinesis 4 [Source:HGNC Symbol;Acc:HGNC:19192]13211.2590.5335Yes
17CXCL2C-X-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:4603]17281.0500.5364Yes
18SPRY2sprouty RTK signaling antagonist 2 [Source:HGNC Symbol;Acc:HGNC:11270]18181.0090.5474Yes
19FCRL2Fc receptor like 2 [Source:HGNC Symbol;Acc:HGNC:14875]19790.9460.5556Yes
20GPR4G protein-coupled receptor 4 [Source:HGNC Symbol;Acc:HGNC:4497]27880.6850.5429Yes
21OSBP2oxysterol binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8504]31020.6070.5425Yes
22TNFSF15TNF superfamily member 15 [Source:HGNC Symbol;Acc:HGNC:11931]31910.5860.5478Yes
23ADAM8ADAM metallopeptidase domain 8 [Source:HGNC Symbol;Acc:HGNC:215]32840.5640.5528Yes
24IL23Ainterleukin 23 subunit alpha [Source:HGNC Symbol;Acc:HGNC:15488]34960.5150.5540Yes
25SNAP91synaptosome associated protein 91 [Source:HGNC Symbol;Acc:HGNC:14986]37060.4700.5545Yes
26CXCL3C-X-C motif chemokine ligand 3 [Source:HGNC Symbol;Acc:HGNC:4604]39100.4340.5548Yes
27CCL20C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619]40000.4150.5579Yes
28SH2D2ASH2 domain containing 2A [Source:HGNC Symbol;Acc:HGNC:10821]43630.3500.5528No
29HBEGFheparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059]44740.3320.5542No
30MKRN3makorin ring finger protein 3 [Source:HGNC Symbol;Acc:HGNC:7114]48660.2660.5471No
31KCNJ14potassium inwardly rectifying channel subfamily J member 14 [Source:HGNC Symbol;Acc:HGNC:6260]48970.2580.5497No
32BIRC3baculoviral IAP repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:591]50080.2420.5500No
33ZNF639zinc finger protein 639 [Source:HGNC Symbol;Acc:HGNC:30950]50550.2320.5518No
34INHBAinhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066]53800.1790.5454No
35TAGLN3transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]53890.1780.5476No
36NDOR1NADPH dependent diflavin oxidoreductase 1 [Source:HGNC Symbol;Acc:HGNC:29838]54530.1680.5481No
37RREB1ras responsive element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:10449]55590.1530.5473No
38CXCL5C-X-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10642]58140.1210.5420No
39SCG5secretogranin V [Source:HGNC Symbol;Acc:HGNC:10816]67750.0000.5160No
40RNASE1ribonuclease A family member 1, pancreatic [Source:HGNC Symbol;Acc:HGNC:10044]74580.0000.4976No
41SLCO5A1solute carrier organic anion transporter family member 5A1 [Source:HGNC Symbol;Acc:HGNC:19046]74780.0000.4970No
42CD247CD247 molecule [Source:HGNC Symbol;Acc:HGNC:1677]83280.0000.4741No
43SHOXshort stature homeobox [Source:HGNC Symbol;Acc:HGNC:10853]83810.0000.4727No
44CALB1calbindin 1 [Source:HGNC Symbol;Acc:HGNC:1434]89690.0000.4568No
45CLSTN2calsyntenin 2 [Source:HGNC Symbol;Acc:HGNC:17448]90840.0000.4537No
46ADAM19ADAM metallopeptidase domain 19 [Source:HGNC Symbol;Acc:HGNC:197]101040.0000.4261No
47FAM174Bfamily with sequence similarity 174 member B [Source:HGNC Symbol;Acc:HGNC:34339]106510.0000.4113No
48PPBPpro-platelet basic protein [Source:HGNC Symbol;Acc:HGNC:9240]111310.0000.3984No
49TFDP3transcription factor Dp family member 3 [Source:HGNC Symbol;Acc:HGNC:24603]113360.0000.3929No
50TSPAN1tetraspanin 1 [Source:HGNC Symbol;Acc:HGNC:20657]116700.0000.3838No
51CLPScolipase [Source:HGNC Symbol;Acc:HGNC:2085]118340.0000.3794No
52IGFBP3insulin like growth factor binding protein 3 [Source:HGNC Symbol;Acc:HGNC:5472]119240.0000.3770No
53ESM1endothelial cell specific molecule 1 [Source:HGNC Symbol;Acc:HGNC:3466]120370.0000.3740No
54TAAR5trace amine associated receptor 5 [Source:HGNC Symbol;Acc:HGNC:30236]127420.0000.3549No
55GBA3glucosylceramidase beta 3 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:19069]128470.0000.3521No
56RBMXL2RBMX like 2 [Source:HGNC Symbol;Acc:HGNC:17886]131190.0000.3448No
57GULP1GULP PTB domain containing engulfment adaptor 1 [Source:HGNC Symbol;Acc:HGNC:18649]132880.0000.3402No
58HOXD11homeobox D11 [Source:HGNC Symbol;Acc:HGNC:5134]133600.0000.3383No
59OR2B6olfactory receptor family 2 subfamily B member 6 [Source:HGNC Symbol;Acc:HGNC:8241]136200.0000.3313No
60KIAA1549LKIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]138340.0000.3255No
61RELNreelin [Source:HGNC Symbol;Acc:HGNC:9957]139600.0000.3222No
62IL37interleukin 37 [Source:HGNC Symbol;Acc:HGNC:15563]139750.0000.3218No
63RETNresistin [Source:HGNC Symbol;Acc:HGNC:20389]140740.0000.3191No
64MYH2myosin heavy chain 2 [Source:HGNC Symbol;Acc:HGNC:7572]144950.0000.3078No
65HSD11B1hydroxysteroid 11-beta dehydrogenase 1 [Source:HGNC Symbol;Acc:HGNC:5208]145370.0000.3067No
66ZP4zona pellucida glycoprotein 4 [Source:HGNC Symbol;Acc:HGNC:15770]149160.0000.2964No
67SPINK1serine peptidase inhibitor Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]155600.0000.2790No
68IL1R2interleukin 1 receptor type 2 [Source:HGNC Symbol;Acc:HGNC:5994]159710.0000.2679No
69AMELYamelogenin Y-linked [Source:HGNC Symbol;Acc:HGNC:462]160700.0000.2653No
70MGLLmonoglyceride lipase [Source:HGNC Symbol;Acc:HGNC:17038]172080.0000.2345No
71GRPgastrin releasing peptide [Source:HGNC Symbol;Acc:HGNC:4605]172100.0000.2345No
72SEMA3Bsemaphorin 3B [Source:HGNC Symbol;Acc:HGNC:10724]179080.0000.2156No
73CEACAM3CEA cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:1815]179340.0000.2149No
74IGHV3-48immunoglobulin heavy variable 3-48 [Source:HGNC Symbol;Acc:HGNC:5606]182720.0000.2058No
75BMP6bone morphogenetic protein 6 [Source:HGNC Symbol;Acc:HGNC:1073]190990.0000.1835No
76MMP1matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155]191290.0000.1827No
77NRLneural retina leucine zipper [Source:HGNC Symbol;Acc:HGNC:8002]194070.0000.1752No
78CXCL8C-X-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:6025]194710.0000.1735No
79CXCL1C-X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:4602]194800.0000.1733No
80TBX3T-box transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:11602]197460.0000.1661No
81HSD17B2hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]198000.0000.1647No
82GABRA3gamma-aminobutyric acid type A receptor subunit alpha3 [Source:HGNC Symbol;Acc:HGNC:4077]200000.0000.1593No
83NR1H4nuclear receptor subfamily 1 group H member 4 [Source:HGNC Symbol;Acc:HGNC:7967]200010.0000.1593No
84PRLprolactin [Source:HGNC Symbol;Acc:HGNC:9445]201320.0000.1557No
85PRYPTPN13 like Y-linked [Source:HGNC Symbol;Acc:HGNC:14024]201390.0000.1556No
86MMP10matrix metallopeptidase 10 [Source:HGNC Symbol;Acc:HGNC:7156]209240.0000.1344No
87KRT34keratin 34 [Source:HGNC Symbol;Acc:HGNC:6452]220680.0000.1034No
88CRCT1cysteine rich C-terminal 1 [Source:HGNC Symbol;Acc:HGNC:29875]222760.0000.0978No
89RMSTrhabdomyosarcoma 2 associated transcript [Source:HGNC Symbol;Acc:HGNC:29893]223600.0000.0956No
90NAV3neuron navigator 3 [Source:HGNC Symbol;Acc:HGNC:15998]224920.0000.0920No
91CMKLR1chemerin chemokine-like receptor 1 [Source:HGNC Symbol;Acc:HGNC:2121]225300.0000.0910No
92CD1ACD1a molecule [Source:HGNC Symbol;Acc:HGNC:1634]231240.0000.0750No
93NELL2neural EGFL like 2 [Source:HGNC Symbol;Acc:HGNC:7751]237960.0000.0568No
94SLC25A31solute carrier family 25 member 31 [Source:HGNC Symbol;Acc:HGNC:25319]237970.0000.0568No
95NPPBnatriuretic peptide B [Source:HGNC Symbol;Acc:HGNC:7940]238760.0000.0547No
96TSPY1testis specific protein Y-linked 1 [Source:HGNC Symbol;Acc:HGNC:12381]239810.0000.0519No
97SNAP25synaptosome associated protein 25 [Source:HGNC Symbol;Acc:HGNC:11132]243640.0000.0416No
98KCNK15potassium two pore domain channel subfamily K member 15 [Source:HGNC Symbol;Acc:HGNC:13814]244460.0000.0394No
99DNAH9dynein axonemal heavy chain 9 [Source:HGNC Symbol;Acc:HGNC:2953]246190.0000.0347No
100FAM155Bfamily with sequence similarity 155 member B [Source:HGNC Symbol;Acc:HGNC:30701]246400.0000.0342No
101CSF2colony stimulating factor 2 [Source:HGNC Symbol;Acc:HGNC:2434]247240.0000.0319No
102IFNA8interferon alpha 8 [Source:HGNC Symbol;Acc:HGNC:5429]249060.0000.0270No
103CHRNA2cholinergic receptor nicotinic alpha 2 subunit [Source:HGNC Symbol;Acc:HGNC:1956]249880.0000.0248No
104PTPRRprotein tyrosine phosphatase receptor type R [Source:HGNC Symbol;Acc:HGNC:9680]252690.0000.0173No
105TTC22tetratricopeptide repeat domain 22 [Source:HGNC Symbol;Acc:HGNC:26067]255390.0000.0100No
106PRSS3serine protease 3 [Source:HGNC Symbol;Acc:HGNC:9486]256090.0000.0081No
107SMPXsmall muscle protein X-linked [Source:HGNC Symbol;Acc:HGNC:11122]257430.0000.0045No
108PDCD1LG2programmed cell death 1 ligand 2 [Source:HGNC Symbol;Acc:HGNC:18731]258410.0000.0019No
109FNDC8fibronectin type III domain containing 8 [Source:HGNC Symbol;Acc:HGNC:25286]261180.000-0.0056No
110ITGA2integrin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6137]267040.000-0.0214No
111A2Malpha-2-macroglobulin [Source:HGNC Symbol;Acc:HGNC:7]272660.000-0.0366No
112STC1stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373]276570.000-0.0471No
113GFI1growth factor independent 1 transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:4237]28114-0.049-0.0588No
114ST3GAL6ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:18080]28306-0.078-0.0630No
115HAS2hyaluronan synthase 2 [Source:HGNC Symbol;Acc:HGNC:4819]28337-0.082-0.0627No
116CCR6C-C motif chemokine receptor 6 [Source:HGNC Symbol;Acc:HGNC:1607]28458-0.099-0.0646No
117ADAMTS6ADAM metallopeptidase with thrombospondin type 1 motif 6 [Source:HGNC Symbol;Acc:HGNC:222]28594-0.116-0.0667No
118CD37CD37 molecule [Source:HGNC Symbol;Acc:HGNC:1666]28914-0.158-0.0733No
119HPNhepsin [Source:HGNC Symbol;Acc:HGNC:5155]29028-0.176-0.0740No
120CTNNA2catenin alpha 2 [Source:HGNC Symbol;Acc:HGNC:2510]29545-0.249-0.0847No
121AKT2AKT serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:392]29601-0.258-0.0827No
122G0S2G0/G1 switch 2 [Source:HGNC Symbol;Acc:HGNC:30229]29778-0.287-0.0837No
123LAT2linker for activation of T cells family member 2 [Source:HGNC Symbol;Acc:HGNC:12749]30054-0.323-0.0868No
124RBP4retinol binding protein 4 [Source:HGNC Symbol;Acc:HGNC:9922]30083-0.328-0.0833No
125CDSNcorneodesmosin [Source:HGNC Symbol;Acc:HGNC:1802]30706-0.418-0.0945No
126LILRA6leukocyte immunoglobulin like receptor A6 [Source:HGNC Symbol;Acc:HGNC:15495]31036-0.467-0.0973No
127RPS4Y1ribosomal protein S4 Y-linked 1 [Source:HGNC Symbol;Acc:HGNC:10425]31140-0.483-0.0936No
128LDB3LIM domain binding 3 [Source:HGNC Symbol;Acc:HGNC:15710]31373-0.522-0.0930No
129TERTtelomerase reverse transcriptase [Source:HGNC Symbol;Acc:HGNC:11730]31727-0.584-0.0948No
130ATG10autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]32474-0.739-0.1052No
131GYPCglycophorin C (Gerbich blood group) [Source:HGNC Symbol;Acc:HGNC:4704]32499-0.745-0.0959No
132ITPKAinositol-trisphosphate 3-kinase A [Source:HGNC Symbol;Acc:HGNC:6178]32921-0.851-0.0960No
133KCNC2potassium voltage-gated channel subfamily C member 2 [Source:HGNC Symbol;Acc:HGNC:6234]33047-0.884-0.0877No
134KIF5Ckinesin family member 5C [Source:HGNC Symbol;Acc:HGNC:6325]33153-0.914-0.0784No
135KCNC1potassium voltage-gated channel subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:6233]34042-1.196-0.0865No
136OSGIN1oxidative stress induced growth inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:30093]34201-1.246-0.0743No
137SLCO4A1solute carrier organic anion transporter family member 4A1 [Source:HGNC Symbol;Acc:HGNC:10953]35038-1.592-0.0758No
138ANGPTL4angiopoietin like 4 [Source:HGNC Symbol;Acc:HGNC:16039]35557-1.870-0.0650No
139PDE2Aphosphodiesterase 2A [Source:HGNC Symbol;Acc:HGNC:8777]35637-1.928-0.0415No
140CCDC181coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]36689-3.031-0.0298No
141KIF5Akinesin family member 5A [Source:HGNC Symbol;Acc:HGNC:6323]36703-3.0590.0105No
Table: GSEA details [plain text format]



Fig 2: KRAS.LUNG.BREAST_UP.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KRAS.LUNG.BREAST_UP.V1_UP: Random ES distribution   
Gene set null distribution of ES for KRAS.LUNG.BREAST_UP.V1_UP