Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_GAQ
GeneSetKRAS.LUNG_UP.V1_UP
Enrichment Score (ES)0.4979458
Normalized Enrichment Score (NES)1.2843949
Nominal p-value0.011494253
FDR q-value0.099703014
FWER p-Value0.468
Table: GSEA Results Summary



Fig 1: Enrichment plot: KRAS.LUNG_UP.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CSF3colony stimulating factor 3 [Source:HGNC Symbol;Acc:HGNC:2438]24.9300.0659Yes
2TNNT2troponin T2, cardiac type [Source:HGNC Symbol;Acc:HGNC:11949]434.1910.1209Yes
3BCL2A1BCL2 related protein A1 [Source:HGNC Symbol;Acc:HGNC:991]444.1850.1769Yes
4C3AR1complement C3a receptor 1 [Source:HGNC Symbol;Acc:HGNC:1319]743.7550.2264Yes
5IL13RA2interleukin 13 receptor subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:5975]1693.0640.2648Yes
6ETS1ETS proto-oncogene 1, transcription factor [Source:HGNC Symbol;Acc:HGNC:3488]2032.8960.3027Yes
7PRKG2protein kinase cGMP-dependent 2 [Source:HGNC Symbol;Acc:HGNC:9416]2102.8710.3409Yes
8IL1RL1interleukin 1 receptor like 1 [Source:HGNC Symbol;Acc:HGNC:5998]2412.7560.3770Yes
9DCBLD2discoidin, CUB and LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24627]2432.7550.4138Yes
10SLC6A4solute carrier family 6 member 4 [Source:HGNC Symbol;Acc:HGNC:11050]3612.3590.4422Yes
11POLMDNA polymerase mu [Source:HGNC Symbol;Acc:HGNC:9185]5022.0770.4662Yes
12IKZF1IKAROS family zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:13176]8111.6520.4800Yes
13DOCK4dedicator of cytokinesis 4 [Source:HGNC Symbol;Acc:HGNC:19192]13211.2590.4830Yes
14EVI2Aecotropic viral integration site 2A [Source:HGNC Symbol;Acc:HGNC:3499]13761.2230.4979Yes
15NESnestin [Source:HGNC Symbol;Acc:HGNC:7756]22290.8510.4863No
16ZBTB48zinc finger and BTB domain containing 48 [Source:HGNC Symbol;Acc:HGNC:4930]23600.8060.4935No
17ADAM8ADAM metallopeptidase domain 8 [Source:HGNC Symbol;Acc:HGNC:215]32840.5640.4761No
18IL23Ainterleukin 23 subunit alpha [Source:HGNC Symbol;Acc:HGNC:15488]34960.5150.4773No
19NDNFneuron derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:26256]37420.4630.4769No
20SLC18A1solute carrier family 18 member A1 [Source:HGNC Symbol;Acc:HGNC:10934]38600.4420.4796No
21CCL20C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619]40000.4150.4814No
22SH2D2ASH2 domain containing 2A [Source:HGNC Symbol;Acc:HGNC:10821]43630.3500.4763No
23HBEGFheparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059]44740.3320.4777No
24ZNF639zinc finger protein 639 [Source:HGNC Symbol;Acc:HGNC:30950]50550.2320.4651No
25EGFL7EGF like domain multiple 7 [Source:HGNC Symbol;Acc:HGNC:20594]51500.2140.4655No
26ZNF821zinc finger protein 821 [Source:HGNC Symbol;Acc:HGNC:28043]53140.1900.4636No
27CFAP69cilia and flagella associated protein 69 [Source:HGNC Symbol;Acc:HGNC:26107]53260.1870.4658No
28INHBAinhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066]53800.1790.4668No
29NDOR1NADPH dependent diflavin oxidoreductase 1 [Source:HGNC Symbol;Acc:HGNC:29838]54530.1680.4671No
30RREB1ras responsive element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:10449]55590.1530.4663No
31CXCL5C-X-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10642]58140.1210.4610No
32HTR75-hydroxytryptamine receptor 7 [Source:HGNC Symbol;Acc:HGNC:5302]59200.1030.4595No
33GPR3G protein-coupled receptor 3 [Source:HGNC Symbol;Acc:HGNC:4484]60440.0870.4574No
34FBXO4F-box protein 4 [Source:HGNC Symbol;Acc:HGNC:13583]61440.0720.4557No
35HS3ST3A1heparan sulfate-glucosamine 3-sulfotransferase 3A1 [Source:HGNC Symbol;Acc:HGNC:5196]65110.0090.4459No
36SCG5secretogranin V [Source:HGNC Symbol;Acc:HGNC:10816]67750.0000.4388No
37CRYAAcrystallin alpha A [Source:HGNC Symbol;Acc:HGNC:2388]68900.0000.4357No
38ASGR2asialoglycoprotein receptor 2 [Source:HGNC Symbol;Acc:HGNC:743]71760.0000.4280No
39RNASE1ribonuclease A family member 1, pancreatic [Source:HGNC Symbol;Acc:HGNC:10044]74580.0000.4204No
40SLCO5A1solute carrier organic anion transporter family member 5A1 [Source:HGNC Symbol;Acc:HGNC:19046]74780.0000.4199No
41CD247CD247 molecule [Source:HGNC Symbol;Acc:HGNC:1677]83280.0000.3969No
42FRMD1FERM domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21240]87380.0000.3858No
43CLEC4AC-type lectin domain family 4 member A [Source:HGNC Symbol;Acc:HGNC:13257]96380.0000.3615No
44KCNA5potassium voltage-gated channel subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:6224]98930.0000.3546No
45GRIN2Aglutamate ionotropic receptor NMDA type subunit 2A [Source:HGNC Symbol;Acc:HGNC:4585]105000.0000.3382No
46ADA2adenosine deaminase 2 [Source:HGNC Symbol;Acc:HGNC:1839]112120.0000.3190No
47CCT8L2chaperonin containing TCP1 subunit 8 like 2 [Source:HGNC Symbol;Acc:HGNC:15553]112960.0000.3167No
48N4BP2L2-IT2N4BPL2 intronic transcript 2 [Source:HGNC Symbol;Acc:HGNC:25038]115740.0000.3092No
49TSPAN1tetraspanin 1 [Source:HGNC Symbol;Acc:HGNC:20657]116700.0000.3066No
50PRG3proteoglycan 3, pro eosinophil major basic protein 2 [Source:HGNC Symbol;Acc:HGNC:9363]116760.0000.3065No
51NPHS1NPHS1 adhesion molecule, nephrin [Source:HGNC Symbol;Acc:HGNC:7908]118110.0000.3029No
52SLC6A11solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]119880.0000.2981No
53SIGLEC15sialic acid binding Ig like lectin 15 [Source:HGNC Symbol;Acc:HGNC:27596]120160.0000.2974No
54GBA3glucosylceramidase beta 3 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:19069]128470.0000.2749No
55PPP1R14Dprotein phosphatase 1 regulatory inhibitor subunit 14D [Source:HGNC Symbol;Acc:HGNC:14953]132050.0000.2653No
56HOXD11homeobox D11 [Source:HGNC Symbol;Acc:HGNC:5134]133600.0000.2611No
57LILRB1leukocyte immunoglobulin like receptor B1 [Source:HGNC Symbol;Acc:HGNC:6605]135820.0000.2551No
58OR2B6olfactory receptor family 2 subfamily B member 6 [Source:HGNC Symbol;Acc:HGNC:8241]136200.0000.2541No
59KIAA1549LKIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]138340.0000.2484No
60RELNreelin [Source:HGNC Symbol;Acc:HGNC:9957]139600.0000.2450No
61RETNresistin [Source:HGNC Symbol;Acc:HGNC:20389]140740.0000.2419No
62MYH2myosin heavy chain 2 [Source:HGNC Symbol;Acc:HGNC:7572]144950.0000.2305No
63HSD11B1hydroxysteroid 11-beta dehydrogenase 1 [Source:HGNC Symbol;Acc:HGNC:5208]145370.0000.2294No
64RGS4regulator of G protein signaling 4 [Source:HGNC Symbol;Acc:HGNC:10000]148780.0000.2202No
65PAX4paired box 4 [Source:HGNC Symbol;Acc:HGNC:8618]149620.0000.2180No
66LRIG1leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]153110.0000.2086No
67BTCbetacellulin [Source:HGNC Symbol;Acc:HGNC:1121]157250.0000.1974No
68FUT5fucosyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4016]177580.0000.1424No
69TAS2R1taste 2 receptor member 1 [Source:HGNC Symbol;Acc:HGNC:14909]180070.0000.1357No
70SEMG2semenogelin 2 [Source:HGNC Symbol;Acc:HGNC:10743]183370.0000.1268No
71MT3metallothionein 3 [Source:HGNC Symbol;Acc:HGNC:7408]190970.0000.1062No
72MMP1matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155]191290.0000.1054No
73NKX2-5NK2 homeobox 5 [Source:HGNC Symbol;Acc:HGNC:2488]192240.0000.1029No
74NGFnerve growth factor [Source:HGNC Symbol;Acc:HGNC:7808]193030.0000.1008No
75MIR124-1HGMIR124-1 host gene [Source:HGNC Symbol;Acc:HGNC:27231]194610.0000.0965No
76CXCL8C-X-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:6025]194710.0000.0963No
77TBX3T-box transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:11602]197460.0000.0888No
78ADAMTS3ADAM metallopeptidase with thrombospondin type 1 motif 3 [Source:HGNC Symbol;Acc:HGNC:219]200470.0000.0807No
79IGSF1immunoglobulin superfamily member 1 [Source:HGNC Symbol;Acc:HGNC:5948]206920.0000.0633No
80MMP20matrix metallopeptidase 20 [Source:HGNC Symbol;Acc:HGNC:7167]209100.0000.0574No
81ZNF749zinc finger protein 749 [Source:HGNC Symbol;Acc:HGNC:32783]211320.0000.0514No
82SLC16A8solute carrier family 16 member 8 [Source:HGNC Symbol;Acc:HGNC:16270]215010.0000.0415No
83KIR2DL3killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 3 [Source:HGNC Symbol;Acc:HGNC:6331]217320.0000.0353No
84NAV3neuron navigator 3 [Source:HGNC Symbol;Acc:HGNC:15998]224920.0000.0147No
85CYP2J2cytochrome P450 family 2 subfamily J member 2 [Source:HGNC Symbol;Acc:HGNC:2634]228430.0000.0052No
86CD1ACD1a molecule [Source:HGNC Symbol;Acc:HGNC:1634]231240.000-0.0023No
87CD48CD48 molecule [Source:HGNC Symbol;Acc:HGNC:1683]231820.000-0.0039No
88CD80CD80 molecule [Source:HGNC Symbol;Acc:HGNC:1700]232430.000-0.0055No
89DEFA5defensin alpha 5 [Source:HGNC Symbol;Acc:HGNC:2764]237190.000-0.0184No
90NELL2neural EGFL like 2 [Source:HGNC Symbol;Acc:HGNC:7751]237960.000-0.0204No
91TSPY1testis specific protein Y-linked 1 [Source:HGNC Symbol;Acc:HGNC:12381]239810.000-0.0254No
92WNT7AWnt family member 7A [Source:HGNC Symbol;Acc:HGNC:12786]243250.000-0.0347No
93ADCYAP1R1ADCYAP receptor type I [Source:HGNC Symbol;Acc:HGNC:242]244660.000-0.0385No
94ALLCallantoicase [Source:HGNC Symbol;Acc:HGNC:17377]245140.000-0.0397No
95LINC00472long intergenic non-protein coding RNA 472 [Source:HGNC Symbol;Acc:HGNC:21380]248470.000-0.0487No
96IFNA8interferon alpha 8 [Source:HGNC Symbol;Acc:HGNC:5429]249060.000-0.0503No
97UGT1A10UDP glucuronosyltransferase family 1 member A10 [Source:HGNC Symbol;Acc:HGNC:12531]251480.000-0.0568No
98PTPRRprotein tyrosine phosphatase receptor type R [Source:HGNC Symbol;Acc:HGNC:9680]252690.000-0.0601No
99ANO1anoctamin 1 [Source:HGNC Symbol;Acc:HGNC:21625]252950.000-0.0607No
100TEX13Atestis expressed 13A [Source:HGNC Symbol;Acc:HGNC:11735]253700.000-0.0627No
101GRIP2glutamate receptor interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:23841]255010.000-0.0663No
102TTC22tetratricopeptide repeat domain 22 [Source:HGNC Symbol;Acc:HGNC:26067]255390.000-0.0673No
103SMPXsmall muscle protein X-linked [Source:HGNC Symbol;Acc:HGNC:11122]257430.000-0.0727No
104PDCD1LG2programmed cell death 1 ligand 2 [Source:HGNC Symbol;Acc:HGNC:18731]258410.000-0.0754No
105FNDC8fibronectin type III domain containing 8 [Source:HGNC Symbol;Acc:HGNC:25286]261180.000-0.0828No
106ITGA2integrin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6137]267040.000-0.0987No
107MAGEA6MAGE family member A6 [Source:HGNC Symbol;Acc:HGNC:6804]269520.000-0.1054No
108TMEM238Ltransmembrane protein 238 like [Source:HGNC Symbol;Acc:HGNC:44356]270980.000-0.1093No
109CELA2Bchymotrypsin like elastase 2B [Source:HGNC Symbol;Acc:HGNC:29995]273450.000-0.1159No
110PCDH17protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]28041-0.037-0.1342No
111ST3GAL6ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:18080]28306-0.078-0.1404No
112CYP4F8cytochrome P450 family 4 subfamily F member 8 [Source:HGNC Symbol;Acc:HGNC:2648]28451-0.097-0.1430No
113HPNhepsin [Source:HGNC Symbol;Acc:HGNC:5155]29028-0.176-0.1562No
114AKT2AKT serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:392]29601-0.258-0.1682No
115G0S2G0/G1 switch 2 [Source:HGNC Symbol;Acc:HGNC:30229]29778-0.287-0.1691No
116CLSTN3calsyntenin 3 [Source:HGNC Symbol;Acc:HGNC:18371]29989-0.314-0.1706No
117RBP4retinol binding protein 4 [Source:HGNC Symbol;Acc:HGNC:9922]30083-0.328-0.1688No
118LAG3lymphocyte activating 3 [Source:HGNC Symbol;Acc:HGNC:6476]30957-0.457-0.1863No
119SARM1sterile alpha and TIR motif containing 1 [Source:HGNC Symbol;Acc:HGNC:17074]31147-0.484-0.1849No
120BANK1B cell scaffold protein with ankyrin repeats 1 [Source:HGNC Symbol;Acc:HGNC:18233]31152-0.484-0.1785No
121DOCK2dedicator of cytokinesis 2 [Source:HGNC Symbol;Acc:HGNC:2988]31167-0.488-0.1724No
122LDB3LIM domain binding 3 [Source:HGNC Symbol;Acc:HGNC:15710]31373-0.522-0.1710No
123TMEM176Btransmembrane protein 176B [Source:HGNC Symbol;Acc:HGNC:29596]31396-0.527-0.1645No
124TMEM158transmembrane protein 158 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:30293]31757-0.590-0.1664No
125FABP3fatty acid binding protein 3 [Source:HGNC Symbol;Acc:HGNC:3557]32453-0.733-0.1753No
126ATG10autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]32474-0.739-0.1660No
127OGDHLoxoglutarate dehydrogenase like [Source:HGNC Symbol;Acc:HGNC:25590]32664-0.787-0.1606No
128SDCCAG8SHH signaling and ciliogenesis regulator SDCCAG8 [Source:HGNC Symbol;Acc:HGNC:10671]32916-0.851-0.1560No
129KIF5Ckinesin family member 5C [Source:HGNC Symbol;Acc:HGNC:6325]33153-0.914-0.1501No
130B3GNTL1UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]33611-1.052-0.1484No
131ZBTB44zinc finger and BTB domain containing 44 [Source:HGNC Symbol;Acc:HGNC:25001]33764-1.098-0.1379No
132ABCB1ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]34027-1.192-0.1290No
133AURKCaurora kinase C [Source:HGNC Symbol;Acc:HGNC:11391]34090-1.207-0.1145No
134CYTIPcytohesin 1 interacting protein [Source:HGNC Symbol;Acc:HGNC:9506]34095-1.208-0.0985No
135SLCO4A1solute carrier organic anion transporter family member 4A1 [Source:HGNC Symbol;Acc:HGNC:10953]35038-1.592-0.1027No
136JAK3Janus kinase 3 [Source:HGNC Symbol;Acc:HGNC:6193]35209-1.679-0.0848No
137HROBhomologous recombination factor with OB-fold [Source:HGNC Symbol;Acc:HGNC:28460]35513-1.844-0.0683No
138ANGPTL4angiopoietin like 4 [Source:HGNC Symbol;Acc:HGNC:16039]35557-1.870-0.0445No
139NRP1neuropilin 1 [Source:HGNC Symbol;Acc:HGNC:8004]36599-2.879-0.0341No
140CX3CR1C-X3-C motif chemokine receptor 1 [Source:HGNC Symbol;Acc:HGNC:2558]36888-3.5430.0055No
Table: GSEA details [plain text format]



Fig 2: KRAS.LUNG_UP.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KRAS.LUNG_UP.V1_UP: Random ES distribution   
Gene set null distribution of ES for KRAS.LUNG_UP.V1_UP