Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetDESCARTES_MAIN_FETAL_BIPOLAR_CELLS
Enrichment Score (ES)-0.8183053
Normalized Enrichment Score (NES)-1.7194616
Nominal p-value0.0
FDR q-value1.3434344E-4
FWER p-Value0.001
Table: GSEA Results Summary



Fig 1: Enrichment plot: DESCARTES_MAIN_FETAL_BIPOLAR_CELLS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1GNL2P1G protein nucleolar 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:50779]29350.645-0.0500No
2PRICKLE2prickle planar cell polarity protein 2 [Source:HGNC Symbol;Acc:HGNC:20340]70900.000-0.1622No
3LINC01291long intergenic non-protein coding RNA 1291 [Source:HGNC Symbol;Acc:HGNC:50358]73400.000-0.1690No
4C15orf32chromosome 15 putative open reading frame 32 [Source:HGNC Symbol;Acc:HGNC:26549]74240.000-0.1712No
5LACTBL1lactamase beta like 1 [Source:HGNC Symbol;Acc:HGNC:35445]76300.000-0.1767No
6ARSHarylsulfatase family member H [Source:HGNC Symbol;Acc:HGNC:32488]76840.000-0.1782No
7ASIC4acid sensing ion channel subunit family member 4 [Source:HGNC Symbol;Acc:HGNC:21263]81400.000-0.1905No
8WASF3-AS1WASF3 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:39841]85240.000-0.2008No
9TDRD6tudor domain containing 6 [Source:HGNC Symbol;Acc:HGNC:21339]93060.000-0.2219No
10NRG1-IT3NRG1 intronic transcript 3 [Source:HGNC Symbol;Acc:HGNC:43635]93380.000-0.2228No
11NRG1-IT1NRG1 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:43633]93440.000-0.2229No
12CACNA2D4calcium voltage-gated channel auxiliary subunit alpha2delta 4 [Source:HGNC Symbol;Acc:HGNC:20202]93620.000-0.2234No
13GRIK1glutamate ionotropic receptor kainate type subunit 1 [Source:HGNC Symbol;Acc:HGNC:4579]95330.000-0.2279No
14NFIBnuclear factor I B [Source:HGNC Symbol;Acc:HGNC:7785]102620.000-0.2476No
15GRIK1-AS1GRIK1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:16458]106380.000-0.2577No
16SERTM1serine rich and transmembrane domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33792]108140.000-0.2625No
17ELSPBP1epididymal sperm binding protein 1 [Source:HGNC Symbol;Acc:HGNC:14417]108540.000-0.2635No
18ACKR1atypical chemokine receptor 1 (Duffy blood group) [Source:HGNC Symbol;Acc:HGNC:4035]112510.000-0.2742No
19AC023136.1novel transcript112940.000-0.2754No
20NYAP2neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 [Source:HGNC Symbol;Acc:HGNC:29291]115090.000-0.2811No
21AP001150.1novel transcript, antisense to POU2F3122730.000-0.3018No
22MACROD2-IT1MACROD2 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:16201]130100.000-0.3217No
23GS1-279B7.1microtubule associated protein 1 light chain 3 beta pseudogene [Source:NCBI gene (formerly Entrezgene);Acc:100288079]130560.000-0.3229No
24GLRA1glycine receptor alpha 1 [Source:HGNC Symbol;Acc:HGNC:4326]130720.000-0.3233No
25TMEM196transmembrane protein 196 [Source:HGNC Symbol;Acc:HGNC:22431]133360.000-0.3304No
26TRMT9BtRNA methyltransferase 9B (putative) [Source:HGNC Symbol;Acc:HGNC:26725]134330.000-0.3330No
27LINC02224long intergenic non-protein coding RNA 2224 [Source:HGNC Symbol;Acc:HGNC:53093]139410.000-0.3467No
28TMEM215transmembrane protein 215 [Source:HGNC Symbol;Acc:HGNC:33816]140650.000-0.3500No
29ZNF804Bzinc finger protein 804B [Source:HGNC Symbol;Acc:HGNC:21958]140820.000-0.3504No
30TAFA4TAFA chemokine like family member 4 [Source:HGNC Symbol;Acc:HGNC:21591]142710.000-0.3555No
31VSX1visual system homeobox 1 [Source:HGNC Symbol;Acc:HGNC:12723]147880.000-0.3695No
32VSX2visual system homeobox 2 [Source:HGNC Symbol;Acc:HGNC:1975]147900.000-0.3695No
33SV2Bsynaptic vesicle glycoprotein 2B [Source:HGNC Symbol;Acc:HGNC:16874]158180.000-0.3972No
34RSF1-IT2RSF1 intronic transcript 2 [Source:HGNC Symbol;Acc:HGNC:41438]160240.000-0.4028No
35KRT8P15keratin 8 pseudogene 15 [Source:HGNC Symbol;Acc:HGNC:33367]164630.000-0.4146No
36FEZF2FEZ family zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:13506]186760.000-0.4744No
37CDH20cadherin 20 [Source:HGNC Symbol;Acc:HGNC:1760]187180.000-0.4755No
38LINC01896long intergenic non-protein coding RNA 1896 [Source:HGNC Symbol;Acc:HGNC:52715]197250.000-0.5027No
39AC005746.2novel transcript, antisense to BCAS3197570.000-0.5035No
40LINC01750long intergenic non-protein coding RNA 1750 [Source:HGNC Symbol;Acc:HGNC:52538]198860.000-0.5070No
41GABRB3gamma-aminobutyric acid type A receptor subunit beta3 [Source:HGNC Symbol;Acc:HGNC:4083]199520.000-0.5087No
42TRPC7transient receptor potential cation channel subfamily C member 7 [Source:HGNC Symbol;Acc:HGNC:20754]200670.000-0.5118No
43GABRR3gamma-aminobutyric acid type A receptor subunit rho3 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:17969]201340.000-0.5136No
44GABRR1gamma-aminobutyric acid type A receptor subunit rho1 [Source:HGNC Symbol;Acc:HGNC:4090]201370.000-0.5136No
45LINC01933long intergenic non-protein coding RNA 1933 [Source:HGNC Symbol;Acc:HGNC:52756]205540.000-0.5249No
46RN7SL83PRNA, 7SL, cytoplasmic 83, pseudogene [Source:HGNC Symbol;Acc:HGNC:46099]206760.000-0.5281No
47TRPC7-AS2TRPC7 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:40937]214650.000-0.5494No
48MACROD2-AS1MACROD2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:37193]216410.000-0.5542No
49ZNF385Bzinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]217760.000-0.5578No
50CA10carbonic anhydrase 10 [Source:HGNC Symbol;Acc:HGNC:1369]220990.000-0.5665No
51TMEM132Etransmembrane protein 132E [Source:HGNC Symbol;Acc:HGNC:26991]226700.000-0.5819No
52MIR3671microRNA 3671 [Source:HGNC Symbol;Acc:HGNC:38925]227400.000-0.5837No
53DSCAM-IT1DSCAM intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41327]227920.000-0.5851No
54ZNF223zinc finger protein 223 [Source:HGNC Symbol;Acc:HGNC:13016]229530.000-0.5895No
55LHX4LIM homeobox 4 [Source:HGNC Symbol;Acc:HGNC:21734]234100.000-0.6018No
56RNU6-116PRNA, U6 small nuclear 116, pseudogene [Source:HGNC Symbol;Acc:HGNC:47079]239760.000-0.6170No
57NRG1neuregulin 1 [Source:HGNC Symbol;Acc:HGNC:7997]243810.000-0.6280No
58NCKAP5NCK associated protein 5 [Source:HGNC Symbol;Acc:HGNC:29847]246490.000-0.6352No
59LINC00469long intergenic non-protein coding RNA 469 [Source:HGNC Symbol;Acc:HGNC:26863]248530.000-0.6407No
60CABP2calcium binding protein 2 [Source:HGNC Symbol;Acc:HGNC:1385]249970.000-0.6445No
61GUSBP4GUSB pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:18220]255490.000-0.6594No
62RN7SL754PRNA, 7SL, cytoplasmic 754, pseudogene [Source:HGNC Symbol;Acc:HGNC:46770]261680.000-0.6761No
63AC004835.1novel transcript271690.000-0.7031No
64BSPH1binder of sperm protein homolog 1 [Source:HGNC Symbol;Acc:HGNC:33906]273820.000-0.7089No
65MAP7microtubule associated protein 7 [Source:HGNC Symbol;Acc:HGNC:6869]276650.000-0.7165No
66DSCAMDS cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:3039]277310.000-0.7182No
67MACROD2mono-ADP ribosylhydrolase 2 [Source:HGNC Symbol;Acc:HGNC:16126]27794-0.002-0.7198No
68HSPA8P11heat shock protein family A (Hsp70) member 8 pseudogene 11 [Source:HGNC Symbol;Acc:HGNC:44926]28269-0.073-0.7293No
69FSTL5follistatin like 5 [Source:HGNC Symbol;Acc:HGNC:21386]28597-0.117-0.7328No
70CYP2C8cytochrome P450 family 2 subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:2622]29701-0.272-0.7503No
71ZPBPzona pellucida binding protein [Source:HGNC Symbol;Acc:HGNC:15662]32220-0.687-0.7871Yes
72AIMP1P1aminoacyl tRNA synthetase complex interacting multifunctional protein 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16543]32544-0.756-0.7615Yes
73FAM234Bfamily with sequence similarity 234 member B [Source:HGNC Symbol;Acc:HGNC:29288]32886-0.843-0.7324Yes
74CADPScalcium dependent secretion activator [Source:HGNC Symbol;Acc:HGNC:1426]33647-1.062-0.7047Yes
75B3GLCTbeta 3-glucosyltransferase [Source:HGNC Symbol;Acc:HGNC:20207]33918-1.157-0.6594Yes
76GSG1germ cell associated 1 [Source:HGNC Symbol;Acc:HGNC:19716]34536-1.365-0.6141Yes
77C3orf70chromosome 3 open reading frame 70 [Source:HGNC Symbol;Acc:HGNC:33731]35150-1.652-0.5555Yes
78LRRC1leucine rich repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:14307]35371-1.762-0.4814Yes
79KCTD6potassium channel tetramerization domain containing 6 [Source:HGNC Symbol;Acc:HGNC:22235]35407-1.779-0.4015Yes
80CRYBG3crystallin beta-gamma domain containing 3 [Source:HGNC Symbol;Acc:HGNC:34427]36333-2.509-0.3125Yes
81AGAP1ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 [Source:HGNC Symbol;Acc:HGNC:16922]36688-3.028-0.1845Yes
82HCN2hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 [Source:HGNC Symbol;Acc:HGNC:4846]37048-4.2990.0011Yes
Table: GSEA details [plain text format]



Fig 2: DESCARTES_MAIN_FETAL_BIPOLAR_CELLS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: DESCARTES_MAIN_FETAL_BIPOLAR_CELLS: Random ES distribution   
Gene set null distribution of ES for DESCARTES_MAIN_FETAL_BIPOLAR_CELLS