Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetHALLMARK_BILE_ACID_METABOLISM
Enrichment Score (ES)-0.61863977
Normalized Enrichment Score (NES)-1.3240154
Nominal p-value0.032183908
FDR q-value0.1645037
FWER p-Value0.645
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_BILE_ACID_METABOLISM   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1AQP9aquaporin 9 [Source:HGNC Symbol;Acc:HGNC:643]713.7930.0317No
2ABCA1ATP binding cassette subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:29]2192.8430.0529No
3ATXN1ataxin 1 [Source:HGNC Symbol;Acc:HGNC:10548]2442.7540.0766No
4GCLMglutamate-cysteine ligase modifier subunit [Source:HGNC Symbol;Acc:HGNC:4312]7731.6990.0774No
5PRDX5peroxiredoxin 5 [Source:HGNC Symbol;Acc:HGNC:9355]8341.6240.0901No
6TFCP2L1transcription factor CP2 like 1 [Source:HGNC Symbol;Acc:HGNC:17925]9031.5500.1020No
7PEX11Aperoxisomal biogenesis factor 11 alpha [Source:HGNC Symbol;Acc:HGNC:8852]14081.1990.0990No
8LCKLCK proto-oncogene, Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:6524]14931.1580.1070No
9PEX12peroxisomal biogenesis factor 12 [Source:HGNC Symbol;Acc:HGNC:8854]19170.9690.1041No
10HAO1hydroxyacid oxidase 1 [Source:HGNC Symbol;Acc:HGNC:4809]20510.9180.1087No
11BCAR3BCAR3 adaptor protein, NSP family member [Source:HGNC Symbol;Acc:HGNC:973]22430.8470.1110No
12LIPElipase E, hormone sensitive type [Source:HGNC Symbol;Acc:HGNC:6621]23810.7960.1143No
13IDI1isopentenyl-diphosphate delta isomerase 1 [Source:HGNC Symbol;Acc:HGNC:5387]32650.5680.0955No
14OPTNoptineurin [Source:HGNC Symbol;Acc:HGNC:17142]42900.3630.0710No
15ARandrogen receptor [Source:HGNC Symbol;Acc:HGNC:644]44250.3400.0704No
16CH25Hcholesterol 25-hydroxylase [Source:HGNC Symbol;Acc:HGNC:1907]54190.1740.0451No
17PEX19peroxisomal biogenesis factor 19 [Source:HGNC Symbol;Acc:HGNC:9713]57940.1240.0361No
18PEX13peroxisomal biogenesis factor 13 [Source:HGNC Symbol;Acc:HGNC:8855]62930.0430.0230No
19SOAT2sterol O-acyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:11178]63210.0380.0226No
20EPHX2epoxide hydrolase 2 [Source:HGNC Symbol;Acc:HGNC:3402]81530.000-0.0269No
21ALDH8A1aldehyde dehydrogenase 8 family member A1 [Source:HGNC Symbol;Acc:HGNC:15471]88260.000-0.0451No
22GSTK1glutathione S-transferase kappa 1 [Source:HGNC Symbol;Acc:HGNC:16906]98310.000-0.0723No
23SLC23A1solute carrier family 23 member 1 [Source:HGNC Symbol;Acc:HGNC:10974]100210.000-0.0774No
24APOA1apolipoprotein A1 [Source:HGNC Symbol;Acc:HGNC:600]103040.000-0.0850No
25NEDD4NEDD4 E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:7727]106400.000-0.0941No
26SLC27A2solute carrier family 27 member 2 [Source:HGNC Symbol;Acc:HGNC:10996]110780.000-0.1059No
27AKR1D1aldo-keto reductase family 1 member D1 [Source:HGNC Symbol;Acc:HGNC:388]116970.000-0.1226No
28AGXTalanine--glyoxylate and serine--pyruvate aminotransferase [Source:HGNC Symbol;Acc:HGNC:341]123100.000-0.1391No
29CYP39A1cytochrome P450 family 39 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:17449]125860.000-0.1466No
30HSD3B1hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 [Source:HGNC Symbol;Acc:HGNC:5217]127220.000-0.1502No
31TTRtransthyretin [Source:HGNC Symbol;Acc:HGNC:12405]128380.000-0.1533No
32CYP8B1cytochrome P450 family 8 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2653]155400.000-0.2264No
33DIO1iodothyronine deiodinase 1 [Source:HGNC Symbol;Acc:HGNC:2883]159040.000-0.2362No
34GCGC vitamin D binding protein [Source:HGNC Symbol;Acc:HGNC:4187]162390.000-0.2452No
35SERPINA6serpin family A member 6 [Source:HGNC Symbol;Acc:HGNC:1540]178390.000-0.2885No
36BMP6bone morphogenetic protein 6 [Source:HGNC Symbol;Acc:HGNC:1073]190990.000-0.3225No
37HSD17B6hydroxysteroid 17-beta dehydrogenase 6 [Source:HGNC Symbol;Acc:HGNC:23316]197950.000-0.3413No
38NR1I2nuclear receptor subfamily 1 group I member 2 [Source:HGNC Symbol;Acc:HGNC:7968]199770.000-0.3462No
39NR1H4nuclear receptor subfamily 1 group H member 4 [Source:HGNC Symbol;Acc:HGNC:7967]200010.000-0.3468No
40KLF1Kruppel like factor 1 [Source:HGNC Symbol;Acc:HGNC:6345]206730.000-0.3650No
41BBOX1gamma-butyrobetaine hydroxylase 1 [Source:HGNC Symbol;Acc:HGNC:964]209440.000-0.3723No
42CYP7B1cytochrome P450 family 7 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2652]212420.000-0.3803No
43CYP7A1cytochrome P450 family 7 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:2651]212640.000-0.3809No
44SULT2B1sulfotransferase family 2B member 1 [Source:HGNC Symbol;Acc:HGNC:11459]239550.000-0.4536No
45SULT1B1sulfotransferase family 1B member 1 [Source:HGNC Symbol;Acc:HGNC:17845]242570.000-0.4617No
46PIPOXpipecolic acid and sarcosine oxidase [Source:HGNC Symbol;Acc:HGNC:17804]251520.000-0.4859No
47ALDH1A1aldehyde dehydrogenase 1 family member A1 [Source:HGNC Symbol;Acc:HGNC:402]259450.000-0.5073No
48ABCA6ATP binding cassette subfamily A member 6 [Source:HGNC Symbol;Acc:HGNC:36]271060.000-0.5387No
49ABCA4ATP binding cassette subfamily A member 4 [Source:HGNC Symbol;Acc:HGNC:34]271090.000-0.5388No
50SLCO1A2solute carrier organic anion transporter family member 1A2 [Source:HGNC Symbol;Acc:HGNC:10956]271570.000-0.5400No
51PECRperoxisomal trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:18281]27824-0.005-0.5580No
52ABCA9ATP binding cassette subfamily A member 9 [Source:HGNC Symbol;Acc:HGNC:39]28099-0.047-0.5650No
53ABCA8ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38]28177-0.060-0.5665No
54ABCG8ATP binding cassette subfamily G member 8 [Source:HGNC Symbol;Acc:HGNC:13887]28548-0.109-0.5756No
55SOD1superoxide dismutase 1 [Source:HGNC Symbol;Acc:HGNC:11179]29328-0.220-0.5947No
56GNMTglycine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4415]29499-0.242-0.5972No
57HSD17B11hydroxysteroid 17-beta dehydrogenase 11 [Source:HGNC Symbol;Acc:HGNC:22960]29798-0.290-0.6027No
58CYP46A1cytochrome P450 family 46 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:2641]30390-0.368-0.6154Yes
59SLC22A18solute carrier family 22 member 18 [Source:HGNC Symbol;Acc:HGNC:10964]30418-0.371-0.6128Yes
60SLC23A2solute carrier family 23 member 2 [Source:HGNC Symbol;Acc:HGNC:10973]30539-0.390-0.6126Yes
61GNPATglyceronephosphate O-acyltransferase [Source:HGNC Symbol;Acc:HGNC:4416]30629-0.407-0.6114Yes
62SLC27A5solute carrier family 27 member 5 [Source:HGNC Symbol;Acc:HGNC:10999]30726-0.421-0.6103Yes
63PEX11Gperoxisomal biogenesis factor 11 gamma [Source:HGNC Symbol;Acc:HGNC:20208]30820-0.436-0.6090Yes
64ABCA5ATP binding cassette subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:35]31080-0.474-0.6118Yes
65RBP1retinol binding protein 1 [Source:HGNC Symbol;Acc:HGNC:9919]31093-0.476-0.6079Yes
66PEX6peroxisomal biogenesis factor 6 [Source:HGNC Symbol;Acc:HGNC:8859]31117-0.479-0.6042Yes
67PHYHphytanoyl-CoA 2-hydroxylase [Source:HGNC Symbol;Acc:HGNC:8940]31334-0.516-0.6055Yes
68ACSL5acyl-CoA synthetase long chain family member 5 [Source:HGNC Symbol;Acc:HGNC:16526]31518-0.549-0.6056Yes
69DIO2iodothyronine deiodinase 2 [Source:HGNC Symbol;Acc:HGNC:2884]31767-0.592-0.6071Yes
70ISOC1isochorismatase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24254]31779-0.594-0.6021Yes
71PEX7peroxisomal biogenesis factor 7 [Source:HGNC Symbol;Acc:HGNC:8860]31888-0.614-0.5996Yes
72NR0B2nuclear receptor subfamily 0 group B member 2 [Source:HGNC Symbol;Acc:HGNC:7961]32480-0.740-0.6090Yes
73NUDT12nudix hydrolase 12 [Source:HGNC Symbol;Acc:HGNC:18826]32646-0.783-0.6066Yes
74NR3C2nuclear receptor subfamily 3 group C member 2 [Source:HGNC Symbol;Acc:HGNC:7979]33044-0.884-0.6095Yes
75EFHC1EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16406]33204-0.931-0.6055Yes
76PNPLA8patatin like phospholipase domain containing 8 [Source:HGNC Symbol;Acc:HGNC:28900]33506-1.022-0.6046Yes
77NPC1NPC intracellular cholesterol transporter 1 [Source:HGNC Symbol;Acc:HGNC:7897]33526-1.027-0.5960Yes
78ACSL1acyl-CoA synthetase long chain family member 1 [Source:HGNC Symbol;Acc:HGNC:3569]33710-1.081-0.5914Yes
79CATcatalase [Source:HGNC Symbol;Acc:HGNC:1516]34050-1.199-0.5900Yes
80PXMP2peroxisomal membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:9716]34121-1.215-0.5811Yes
81AMACRalpha-methylacyl-CoA racemase [Source:HGNC Symbol;Acc:HGNC:451]34357-1.301-0.5759Yes
82HSD3B7hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 [Source:HGNC Symbol;Acc:HGNC:18324]34477-1.343-0.5672Yes
83LONP2lon peptidase 2, peroxisomal [Source:HGNC Symbol;Acc:HGNC:20598]34590-1.388-0.5580Yes
84PEX26peroxisomal biogenesis factor 26 [Source:HGNC Symbol;Acc:HGNC:22965]34711-1.430-0.5486Yes
85MLYCDmalonyl-CoA decarboxylase [Source:HGNC Symbol;Acc:HGNC:7150]34936-1.532-0.5411Yes
86PEX16peroxisomal biogenesis factor 16 [Source:HGNC Symbol;Acc:HGNC:8857]35004-1.565-0.5290Yes
87RETSATretinol saturase [Source:HGNC Symbol;Acc:HGNC:25991]35100-1.626-0.5172Yes
88ABCA2ATP binding cassette subfamily A member 2 [Source:HGNC Symbol;Acc:HGNC:32]35192-1.668-0.5049Yes
89FDXRferredoxin reductase [Source:HGNC Symbol;Acc:HGNC:3642]35289-1.725-0.4922Yes
90SCP2sterol carrier protein 2 [Source:HGNC Symbol;Acc:HGNC:10606]35297-1.729-0.4771Yes
91RXRGretinoid X receptor gamma [Source:HGNC Symbol;Acc:HGNC:10479]35365-1.760-0.4633Yes
92ABCD3ATP binding cassette subfamily D member 3 [Source:HGNC Symbol;Acc:HGNC:67]35419-1.787-0.4489Yes
93HSD17B4hydroxysteroid 17-beta dehydrogenase 4 [Source:HGNC Symbol;Acc:HGNC:5213]35498-1.835-0.4348Yes
94DHCR2424-dehydrocholesterol reductase [Source:HGNC Symbol;Acc:HGNC:2859]35555-1.870-0.4197Yes
95IDH2isocitrate dehydrogenase (NADP(+)) 2 [Source:HGNC Symbol;Acc:HGNC:5383]35984-2.196-0.4119Yes
96PEX1peroxisomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8850]36004-2.207-0.3928Yes
97RXRAretinoid X receptor alpha [Source:HGNC Symbol;Acc:HGNC:10477]36045-2.238-0.3741Yes
98FADS2fatty acid desaturase 2 [Source:HGNC Symbol;Acc:HGNC:3575]36156-2.332-0.3564Yes
99SLC35B2solute carrier family 35 member B2 [Source:HGNC Symbol;Acc:HGNC:16872]36196-2.360-0.3366Yes
100ABCA3ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]36224-2.389-0.3162Yes
101CROTcarnitine O-octanoyltransferase [Source:HGNC Symbol;Acc:HGNC:2366]36258-2.425-0.2956Yes
102ABCG4ATP binding cassette subfamily G member 4 [Source:HGNC Symbol;Acc:HGNC:13884]36262-2.431-0.2741Yes
103FADS1fatty acid desaturase 1 [Source:HGNC Symbol;Acc:HGNC:3574]36282-2.449-0.2530Yes
104SLC29A1solute carrier family 29 member 1 (Augustine blood group) [Source:HGNC Symbol;Acc:HGNC:11003]36380-2.561-0.2329Yes
105ABCD1ATP binding cassette subfamily D member 1 [Source:HGNC Symbol;Acc:HGNC:61]36461-2.663-0.2115Yes
106ALDH9A1aldehyde dehydrogenase 9 family member A1 [Source:HGNC Symbol;Acc:HGNC:412]36561-2.810-0.1893Yes
107HACL12-hydroxyacyl-CoA lyase 1 [Source:HGNC Symbol;Acc:HGNC:17856]36603-2.883-0.1649Yes
108PAOXpolyamine oxidase [Source:HGNC Symbol;Acc:HGNC:20837]36907-3.591-0.1413Yes
109IDH1isocitrate dehydrogenase (NADP(+)) 1 [Source:HGNC Symbol;Acc:HGNC:5382]36914-3.618-0.1094Yes
110CYP27A1cytochrome P450 family 27 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:2605]37007-4.017-0.0763Yes
111PFKMphosphofructokinase, muscle [Source:HGNC Symbol;Acc:HGNC:8877]37015-4.046-0.0407Yes
112ABCD2ATP binding cassette subfamily D member 2 [Source:HGNC Symbol;Acc:HGNC:66]37084-4.8250.0002Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_BILE_ACID_METABOLISM   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_BILE_ACID_METABOLISM: Random ES distribution   
Gene set null distribution of ES for HALLMARK_BILE_ACID_METABOLISM