Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetHALLMARK_SPERMATOGENESIS
Enrichment Score (ES)-0.58841175
Normalized Enrichment Score (NES)-1.2759061
Nominal p-value0.040929202
FDR q-value0.2091688
FWER p-Value0.867
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_SPERMATOGENESIS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IL13RA2interleukin 13 receptor subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:5975]1693.0640.0343No
2PGS1phosphatidylglycerophosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:30029]11611.3510.0246No
3CCT6Bchaperonin containing TCP1 subunit 6B [Source:HGNC Symbol;Acc:HGNC:1621]13151.2640.0365No
4TLE4TLE family member 4, transcriptional corepressor [Source:HGNC Symbol;Acc:HGNC:11840]13341.2530.0519No
5DPEP3dipeptidase 3 [Source:HGNC Symbol;Acc:HGNC:23029]15051.1530.0620No
6STAM2signal transducing adaptor molecule 2 [Source:HGNC Symbol;Acc:HGNC:11358]17131.0550.0697No
7ELOVL3ELOVL fatty acid elongase 3 [Source:HGNC Symbol;Acc:HGNC:18047]18700.9900.0781No
8ARL4AADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]19380.9630.0885No
9TSNtranslin [Source:HGNC Symbol;Acc:HGNC:12379]34510.5240.0542No
10RAD17RAD17 checkpoint clamp loader component [Source:HGNC Symbol;Acc:HGNC:9807]35020.5120.0594No
11PAPOLBpoly(A) polymerase beta [Source:HGNC Symbol;Acc:HGNC:15970]35320.5060.0650No
12SNAP91synaptosome associated protein 91 [Source:HGNC Symbol;Acc:HGNC:14986]37060.4700.0663No
13AGFG1ArfGAP with FG repeats 1 [Source:HGNC Symbol;Acc:HGNC:5175]38760.4390.0673No
14NAA11N-alpha-acetyltransferase 11, NatA catalytic subunit [Source:HGNC Symbol;Acc:HGNC:28125]38900.4380.0725No
15PIAS2protein inhibitor of activated STAT 2 [Source:HGNC Symbol;Acc:HGNC:17311]39670.4220.0758No
16LDHClactate dehydrogenase C [Source:HGNC Symbol;Acc:HGNC:6544]41100.3980.0770No
17RPL39Lribosomal protein L39 like [Source:HGNC Symbol;Acc:HGNC:17094]44060.3420.0733No
18TEKT2tektin 2 [Source:HGNC Symbol;Acc:HGNC:11725]44800.3310.0756No
19PHF7PHD finger protein 7 [Source:HGNC Symbol;Acc:HGNC:18458]48490.2690.0690No
20MAST2microtubule associated serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:19035]51260.2180.0643No
21CSNK2A2casein kinase 2 alpha 2 [Source:HGNC Symbol;Acc:HGNC:2459]53820.1780.0597No
22ACTL7Bactin like 7B [Source:HGNC Symbol;Acc:HGNC:162]57590.1290.0511No
23MLLT10MLLT10 histone lysine methyltransferase DOT1L cofactor [Source:HGNC Symbol;Acc:HGNC:16063]62220.0560.0393No
24COILcoilin [Source:HGNC Symbol;Acc:HGNC:2184]62240.0560.0400No
25SHESrc homology 2 domain containing E [Source:HGNC Symbol;Acc:HGNC:27004]62430.0520.0402No
26TALDO1transaldolase 1 [Source:HGNC Symbol;Acc:HGNC:11559]63450.0330.0379No
27PHKG2phosphorylase kinase catalytic subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:8931]63730.0260.0375No
28SCG5secretogranin V [Source:HGNC Symbol;Acc:HGNC:10816]67750.0000.0266No
29SCG3secretogranin III [Source:HGNC Symbol;Acc:HGNC:13707]67770.0000.0266No
30ADCYAP1adenylate cyclase activating polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:241]75700.0000.0052No
31ART3ADP-ribosyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:725]76780.0000.0023No
32CCNA1cyclin A1 [Source:HGNC Symbol;Acc:HGNC:1577]77820.000-0.0005No
33ZC2HC1Czinc finger C2HC-type containing 1C [Source:HGNC Symbol;Acc:HGNC:20354]84760.000-0.0193No
34HOXB1homeobox B1 [Source:HGNC Symbol;Acc:HGNC:5111]90200.000-0.0339No
35ADAM2ADAM metallopeptidase domain 2 [Source:HGNC Symbol;Acc:HGNC:198]91000.000-0.0361No
36ADAD1adenosine deaminase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30713]92490.000-0.0401No
37CAMK4calcium/calmodulin dependent protein kinase IV [Source:HGNC Symbol;Acc:HGNC:1464]92700.000-0.0406No
38CRISP2cysteine rich secretory protein 2 [Source:HGNC Symbol;Acc:HGNC:12024]93100.000-0.0417No
39NPY5Rneuropeptide Y receptor Y5 [Source:HGNC Symbol;Acc:HGNC:7958]93170.000-0.0418No
40DMRT1doublesex and mab-3 related transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:2934]97510.000-0.0536No
41GSTM3glutathione S-transferase mu 3 [Source:HGNC Symbol;Acc:HGNC:4635]98440.000-0.0561No
42GRM8glutamate metabotropic receptor 8 [Source:HGNC Symbol;Acc:HGNC:4600]101420.000-0.0641No
43TULP2TUB like protein 2 [Source:HGNC Symbol;Acc:HGNC:12424]103130.000-0.0687No
44CFTRCF transmembrane conductance regulator [Source:HGNC Symbol;Acc:HGNC:1884]103460.000-0.0696No
45PRM2protamine 2 [Source:HGNC Symbol;Acc:HGNC:9448]117230.000-0.1068No
46SEPTIN4septin 4 [Source:HGNC Symbol;Acc:HGNC:9165]118990.000-0.1115No
47JAM3junctional adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:15532]122470.000-0.1209No
48THEGtheg spermatid protein [Source:HGNC Symbol;Acc:HGNC:13706]128610.000-0.1375No
49TCP11t-complex 11 [Source:HGNC Symbol;Acc:HGNC:11658]145930.000-0.1843No
50TNP2transition protein 2 [Source:HGNC Symbol;Acc:HGNC:11952]151130.000-0.1984No
51TNP1transition protein 1 [Source:HGNC Symbol;Acc:HGNC:11951]151150.000-0.1984No
52HTR5A5-hydroxytryptamine receptor 5A [Source:HGNC Symbol;Acc:HGNC:5300]157010.000-0.2142No
53CLVS1clavesin 1 [Source:HGNC Symbol;Acc:HGNC:23139]158250.000-0.2176No
54MTNR1Amelatonin receptor 1A [Source:HGNC Symbol;Acc:HGNC:7463]159060.000-0.2197No
55DCCDCC netrin 1 receptor [Source:HGNC Symbol;Acc:HGNC:2701]160910.000-0.2247No
56GPR182G protein-coupled receptor 182 [Source:HGNC Symbol;Acc:HGNC:13708]164520.000-0.2345No
57GAPDHSglyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:HGNC Symbol;Acc:HGNC:24864]165520.000-0.2371No
58AKAP4A-kinase anchoring protein 4 [Source:HGNC Symbol;Acc:HGNC:374]167010.000-0.2411No
59DMC1DNA meiotic recombinase 1 [Source:HGNC Symbol;Acc:HGNC:2927]169620.000-0.2482No
60TKTL1transketolase like 1 [Source:HGNC Symbol;Acc:HGNC:11835]172830.000-0.2568No
61HBZhemoglobin subunit zeta [Source:HGNC Symbol;Acc:HGNC:4835]173290.000-0.2581No
62SYCP1synaptonemal complex protein 1 [Source:HGNC Symbol;Acc:HGNC:11487]178990.000-0.2734No
63DNAJB8DnaJ heat shock protein family (Hsp40) member B8 [Source:HGNC Symbol;Acc:HGNC:23699]185480.000-0.2910No
64IL12RB2interleukin 12 receptor subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:5972]196460.000-0.3207No
65PCSK1Nproprotein convertase subtilisin/kexin type 1 inhibitor [Source:HGNC Symbol;Acc:HGNC:17301]207970.000-0.3518No
66H1-6H1.6 linker histone, cluster member [Source:HGNC Symbol;Acc:HGNC:4720]229100.000-0.4089No
67DDX25DEAD-box helicase 25 [Source:HGNC Symbol;Acc:HGNC:18698]232700.000-0.4186No
68MEP1Bmeprin A subunit beta [Source:HGNC Symbol;Acc:HGNC:7020]234370.000-0.4231No
69ACRV1acrosomal vesicle protein 1 [Source:HGNC Symbol;Acc:HGNC:127]236310.000-0.4284No
70TSSK2testis specific serine kinase 2 [Source:HGNC Symbol;Acc:HGNC:11401]247650.000-0.4590No
71CST8cystatin 8 [Source:HGNC Symbol;Acc:HGNC:2480]249270.000-0.4634No
72ODF1outer dense fiber of sperm tails 1 [Source:HGNC Symbol;Acc:HGNC:8113]266810.000-0.5108No
73ZNRF4zinc and ring finger 4 [Source:HGNC Symbol;Acc:HGNC:17726]267190.000-0.5118No
74ACEangiotensin I converting enzyme [Source:HGNC Symbol;Acc:HGNC:2707]273770.000-0.5296No
75MAP7microtubule associated protein 7 [Source:HGNC Symbol;Acc:HGNC:6869]276650.000-0.5374No
76SLC2A5solute carrier family 2 member 5 [Source:HGNC Symbol;Acc:HGNC:11010]277450.000-0.5395No
77CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]27912-0.021-0.5437No
78DDX4DEAD-box helicase 4 [Source:HGNC Symbol;Acc:HGNC:18700]28057-0.040-0.5471No
79GFI1growth factor independent 1 transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:4237]28114-0.049-0.5480No
80PSMG1proteasome assembly chaperone 1 [Source:HGNC Symbol;Acc:HGNC:3043]28187-0.061-0.5492No
81NEFHneurofilament heavy [Source:HGNC Symbol;Acc:HGNC:7737]28319-0.079-0.5517No
82CLGNcalmegin [Source:HGNC Symbol;Acc:HGNC:2060]28503-0.104-0.5554No
83PEBP1phosphatidylethanolamine binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8630]28555-0.111-0.5553No
84ALOX15arachidonate 15-lipoxygenase [Source:HGNC Symbol;Acc:HGNC:433]28607-0.119-0.5552No
85MTORmechanistic target of rapamycin kinase [Source:HGNC Symbol;Acc:HGNC:3942]28724-0.135-0.5566No
86HSPA1Lheat shock protein family A (Hsp70) member 1 like [Source:HGNC Symbol;Acc:HGNC:5234]29155-0.193-0.5658No
87TUBA3Ctubulin alpha 3c [Source:HGNC Symbol;Acc:HGNC:12408]29391-0.230-0.5693No
88POMCproopiomelanocortin [Source:HGNC Symbol;Acc:HGNC:9201]29623-0.261-0.5722No
89BRAFB-Raf proto-oncogene, serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1097]29744-0.281-0.5719No
90CHRM4cholinergic receptor muscarinic 4 [Source:HGNC Symbol;Acc:HGNC:1953]29951-0.310-0.5735No
91VDAC3voltage dependent anion channel 3 [Source:HGNC Symbol;Acc:HGNC:12674]29985-0.314-0.5704No
92GAD1glutamate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:4092]30336-0.359-0.5753No
93OAZ3ornithine decarboxylase antizyme 3 [Source:HGNC Symbol;Acc:HGNC:8097]30600-0.402-0.5774No
94YBX2Y-box binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17948]30931-0.453-0.5805No
95IDEinsulin degrading enzyme [Source:HGNC Symbol;Acc:HGNC:5381]31048-0.469-0.5777No
96MLF1myeloid leukemia factor 1 [Source:HGNC Symbol;Acc:HGNC:7125]31314-0.512-0.5784No
97PRKAR2Aprotein kinase cAMP-dependent type II regulatory subunit alpha [Source:HGNC Symbol;Acc:HGNC:9391]31685-0.575-0.5811Yes
98IP6K1inositol hexakisphosphate kinase 1 [Source:HGNC Symbol;Acc:HGNC:18360]31755-0.589-0.5755Yes
99CLPBcaseinolytic mitochondrial matrix peptidase chaperone subunit B [Source:HGNC Symbol;Acc:HGNC:30664]31940-0.626-0.5726Yes
100ZPBPzona pellucida binding protein [Source:HGNC Symbol;Acc:HGNC:15662]32220-0.687-0.5714Yes
101PACRGparkin coregulated [Source:HGNC Symbol;Acc:HGNC:19152]32495-0.745-0.5694Yes
102TNNI3troponin I3, cardiac type [Source:HGNC Symbol;Acc:HGNC:11947]32562-0.761-0.5615Yes
103AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]32625-0.776-0.5533Yes
104CHFRcheckpoint with forkhead and ring finger domains [Source:HGNC Symbol;Acc:HGNC:20455]32771-0.817-0.5469Yes
105CNIH2cornichon family AMPA receptor auxiliary protein 2 [Source:HGNC Symbol;Acc:HGNC:28744]32821-0.827-0.5377Yes
106HSPA2heat shock protein family A (Hsp70) member 2 [Source:HGNC Symbol;Acc:HGNC:5235]33138-0.909-0.5347Yes
107NOS1nitric oxide synthase 1 [Source:HGNC Symbol;Acc:HGNC:7872]33201-0.929-0.5246Yes
108PCSK4proprotein convertase subtilisin/kexin type 4 [Source:HGNC Symbol;Acc:HGNC:8746]33242-0.944-0.5137Yes
109PARP2poly(ADP-ribose) polymerase 2 [Source:HGNC Symbol;Acc:HGNC:272]33340-0.969-0.5041Yes
110SLC12A2solute carrier family 12 member 2 [Source:HGNC Symbol;Acc:HGNC:10911]33366-0.976-0.4924Yes
111SIRT1sirtuin 1 [Source:HGNC Symbol;Acc:HGNC:14929]33387-0.982-0.4804Yes
112PDHA2pyruvate dehydrogenase E1 subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:8807]33491-1.016-0.4703Yes
113PGK2phosphoglycerate kinase 2 [Source:HGNC Symbol;Acc:HGNC:8898]33669-1.071-0.4615Yes
114ACRBPacrosin binding protein [Source:HGNC Symbol;Acc:HGNC:17195]34192-1.242-0.4599Yes
115ZC3H14zinc finger CCCH-type containing 14 [Source:HGNC Symbol;Acc:HGNC:20509]34373-1.308-0.4482Yes
116LPIN1lipin 1 [Source:HGNC Symbol;Acc:HGNC:13345]34455-1.336-0.4334Yes
117GSG1germ cell associated 1 [Source:HGNC Symbol;Acc:HGNC:19716]34536-1.365-0.4183Yes
118NF2neurofibromin 2 [Source:HGNC Symbol;Acc:HGNC:7773]34561-1.375-0.4015Yes
119KIF2Ckinesin family member 2C [Source:HGNC Symbol;Acc:HGNC:6393]34826-1.475-0.3899Yes
120SPATA6spermatogenesis associated 6 [Source:HGNC Symbol;Acc:HGNC:18309]34997-1.563-0.3747Yes
121CDKN3cyclin dependent kinase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:1791]35659-1.943-0.3679Yes
122EZH2enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]35732-2.004-0.3444Yes
123DBF4DBF4 zinc finger [Source:HGNC Symbol;Acc:HGNC:17364]35886-2.120-0.3217Yes
124TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]35968-2.186-0.2961Yes
125NPHP1nephrocystin 1 [Source:HGNC Symbol;Acc:HGNC:7905]35979-2.195-0.2686Yes
126RFC4replication factor C subunit 4 [Source:HGNC Symbol;Acc:HGNC:9972]36015-2.212-0.2415Yes
127NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]36062-2.250-0.2142Yes
128CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]36081-2.263-0.1859Yes
129IFT88intraflagellar transport 88 [Source:HGNC Symbol;Acc:HGNC:20606]36089-2.269-0.1573Yes
130TOPBP1DNA topoisomerase II binding protein 1 [Source:HGNC Symbol;Acc:HGNC:17008]36130-2.301-0.1292Yes
131GMCL1germ cell-less 1, spermatogenesis associated [Source:HGNC Symbol;Acc:HGNC:23843]36183-2.351-0.1008Yes
132HSPA4Lheat shock protein family A (Hsp70) member 4 like [Source:HGNC Symbol;Acc:HGNC:17041]36208-2.369-0.0714Yes
133BUB1BUB1 mitotic checkpoint serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1148]36249-2.411-0.0419Yes
134NEK2NIMA related kinase 2 [Source:HGNC Symbol;Acc:HGNC:7745]36304-2.474-0.0120Yes
135STRBPspermatid perinuclear RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16462]36434-2.6200.0178Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_SPERMATOGENESIS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_SPERMATOGENESIS: Random ES distribution   
Gene set null distribution of ES for HALLMARK_SPERMATOGENESIS