Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.Nof1.cls #KO_LPS_versus_KO_NA.Nof1.cls #KO_LPS_versus_KO_NA_repos |
| Phenotype | Nof1.cls#KO_LPS_versus_KO_NA_repos |
| Upregulated in class | KO_NA |
| GeneSet | CHR15Q13 |
| Enrichment Score (ES) | -0.6398838 |
| Normalized Enrichment Score (NES) | -1.2881062 |
| Nominal p-value | 0.050790068 |
| FDR q-value | 0.5853324 |
| FWER p-Value | 1.0 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | PDCD6IPP2 | PDCD6IP pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:49873] | 1632 | 1.126 | 0.0104 | No |
| 2 | RPL41P2 | ribosomal protein L41 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:10357] | 2852 | 0.635 | 0.0083 | No |
| 3 | HNRNPA1P71 | heterogeneous nuclear ribonucleoprotein A1 pseudogene 71 [Source:HGNC Symbol;Acc:HGNC:48801] | 4023 | 0.369 | -0.0055 | No |
| 4 | NSMCE3 | NSE3 homolog, SMC5-SMC6 complex component [Source:HGNC Symbol;Acc:HGNC:7677] | 4579 | 0.261 | -0.0078 | No |
| 5 | WHAMMP2 | WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:32360] | 4698 | 0.237 | 0.0004 | No |
| 6 | FMN1 | formin 1 [Source:HGNC Symbol;Acc:HGNC:3768] | 5542 | 0.083 | -0.0183 | No |
| 7 | OTUD7A | OTU deubiquitinase 7A [Source:HGNC Symbol;Acc:HGNC:20718] | 5748 | 0.045 | -0.0217 | No |
| 8 | SCG5 | secretogranin V [Source:HGNC Symbol;Acc:HGNC:10816] | 6191 | 0.000 | -0.0337 | No |
| 9 | RN7SL238P | RNA, 7SL, cytoplasmic 238, pseudogene [Source:HGNC Symbol;Acc:HGNC:46254] | 6257 | 0.000 | -0.0354 | No |
| 10 | GREM1 | gremlin 1, DAN family BMP antagonist [Source:HGNC Symbol;Acc:HGNC:2001] | 7881 | 0.000 | -0.0793 | No |
| 11 | DNM1P50 | dynamin 1 pseudogene 50 [Source:HGNC Symbol;Acc:HGNC:48499] | 8605 | 0.000 | -0.0988 | No |
| 12 | DNM1P30 | dynamin 1 pseudogene 30 [Source:HGNC Symbol;Acc:HGNC:35177] | 8685 | 0.000 | -0.1009 | No |
| 13 | DNM1P28 | dynamin 1 pseudogene 28 [Source:HGNC Symbol;Acc:HGNC:35175] | 8700 | 0.000 | -0.1013 | No |
| 14 | DNM1P31 | dynamin 1 pseudogene 31 [Source:HGNC Symbol;Acc:HGNC:35178] | 8714 | 0.000 | -0.1017 | No |
| 15 | DNM1P32 | dynamin 1 pseudogene 32 [Source:HGNC Symbol;Acc:HGNC:35179] | 8715 | 0.000 | -0.1017 | No |
| 16 | RN7SL673P | RNA, 7SL, cytoplasmic 673, pseudogene [Source:HGNC Symbol;Acc:HGNC:46689] | 11738 | 0.000 | -0.1833 | No |
| 17 | GOLGA6L7 | golgin A6 family like 7 [Source:HGNC Symbol;Acc:HGNC:37442] | 12625 | 0.000 | -0.2072 | No |
| 18 | AC091057.1 | OTU deubiquitinase 7A pseudogene [Source:NCBI gene (formerly Entrezgene);Acc:100288637] | 12649 | 0.000 | -0.2079 | No |
| 19 | CHRFAM7A | CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion [Source:HGNC Symbol;Acc:HGNC:15781] | 13037 | 0.000 | -0.2183 | No |
| 20 | TJP1 | tight junction protein 1 [Source:HGNC Symbol;Acc:HGNC:11827] | 13285 | 0.000 | -0.2250 | No |
| 21 | LINC02256 | long intergenic non-protein coding RNA 2256 [Source:HGNC Symbol;Acc:HGNC:53157] | 13670 | 0.000 | -0.2354 | No |
| 22 | LINC02249 | long intergenic non-protein coding RNA 2249 [Source:HGNC Symbol;Acc:HGNC:32351] | 13685 | 0.000 | -0.2357 | No |
| 23 | ULK4P1 | ULK4 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:15775] | 14321 | 0.000 | -0.2529 | No |
| 24 | ULK4P3 | ULK4 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:15777] | 14323 | 0.000 | -0.2529 | No |
| 25 | ULK4P2 | ULK4 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:15776] | 14324 | 0.000 | -0.2529 | No |
| 26 | TMCO5B | transmembrane and coiled-coil domains 5B (pseudogene) [Source:HGNC Symbol;Acc:HGNC:34243] | 14362 | 0.000 | -0.2539 | No |
| 27 | RN7SL185P | RNA, 7SL, cytoplasmic 185, pseudogene [Source:HGNC Symbol;Acc:HGNC:46201] | 14386 | 0.000 | -0.2545 | No |
| 28 | RN7SL196P | RNA, 7SL, cytoplasmic 196, pseudogene [Source:HGNC Symbol;Acc:HGNC:46212] | 14798 | 0.000 | -0.2657 | No |
| 29 | LINC02352 | long intergenic non-protein coding RNA 2352 [Source:HGNC Symbol;Acc:HGNC:53274] | 14894 | 0.000 | -0.2682 | No |
| 30 | GOLGA8UP | golgin A8 family member U, pseudogene [Source:HGNC Symbol;Acc:HGNC:44411] | 15010 | 0.000 | -0.2713 | No |
| 31 | MIR211 | microRNA 211 [Source:HGNC Symbol;Acc:HGNC:31588] | 15350 | 0.000 | -0.2805 | No |
| 32 | HERC2P11 | hect domain and RLD 2 pseudogene 11 [Source:HGNC Symbol;Acc:HGNC:49882] | 15741 | 0.000 | -0.2910 | No |
| 33 | ABCB10P4 | ABCB10 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:31130] | 16121 | 0.000 | -0.3013 | No |
| 34 | ABCB10P3 | ABCB10 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:31129] | 16122 | 0.000 | -0.3013 | No |
| 35 | FAM189A1 | family with sequence similarity 189 member A1 [Source:HGNC Symbol;Acc:HGNC:29075] | 17258 | 0.000 | -0.3319 | No |
| 36 | RN7SL539P | RNA, 7SL, cytoplasmic 539, pseudogene [Source:HGNC Symbol;Acc:HGNC:46555] | 17587 | 0.000 | -0.3408 | No |
| 37 | RN7SL796P | RNA, 7SL, cytoplasmic 796, pseudogene [Source:HGNC Symbol;Acc:HGNC:46812] | 17682 | 0.000 | -0.3433 | No |
| 38 | MIR4509-3 | microRNA 4509-3 [Source:HGNC Symbol;Acc:HGNC:41610] | 19478 | 0.000 | -0.3918 | No |
| 39 | MIR4509-2 | microRNA 4509-2 [Source:HGNC Symbol;Acc:HGNC:41537] | 19479 | 0.000 | -0.3918 | No |
| 40 | RNU6-466P | RNA, U6 small nuclear 466, pseudogene [Source:HGNC Symbol;Acc:HGNC:47429] | 20531 | 0.000 | -0.4202 | No |
| 41 | RN7SL82P | RNA, 7SL, cytoplasmic 82, pseudogene [Source:HGNC Symbol;Acc:HGNC:46098] | 20573 | 0.000 | -0.4213 | No |
| 42 | RN7SL628P | RNA, 7SL, cytoplasmic 628, pseudogene [Source:HGNC Symbol;Acc:HGNC:46644] | 21332 | 0.000 | -0.4418 | No |
| 43 | RNU6-18P | RNA, U6 small nuclear 18, pseudogene [Source:HGNC Symbol;Acc:HGNC:34262] | 22924 | 0.000 | -0.4848 | No |
| 44 | RNU6-17P | RNA, U6 small nuclear 17, pseudogene [Source:HGNC Symbol;Acc:HGNC:34261] | 22949 | 0.000 | -0.4854 | No |
| 45 | AC012236.1 | uncharacterized LOC283710 [Source:NCBI gene (formerly Entrezgene);Acc:283710] | 23450 | 0.000 | -0.4989 | No |
| 46 | RN7SL286P | RNA, 7SL, cytoplasmic 286, pseudogene [Source:HGNC Symbol;Acc:HGNC:46302] | 23681 | 0.000 | -0.5052 | No |
| 47 | RN7SL469P | RNA, 7SL, cytoplasmic 469, pseudogene [Source:HGNC Symbol;Acc:HGNC:46485] | 24253 | 0.000 | -0.5206 | No |
| 48 | GOLGA8R | golgin A8 family member R [Source:HGNC Symbol;Acc:HGNC:44407] | 24403 | 0.000 | -0.5246 | No |
| 49 | GOLGA8T | golgin A8 family member T [Source:HGNC Symbol;Acc:HGNC:44410] | 24405 | 0.000 | -0.5246 | No |
| 50 | GOLGA8K | golgin A8 family member K [Source:HGNC Symbol;Acc:HGNC:38652] | 24408 | 0.000 | -0.5247 | No |
| 51 | GOLGA8J | golgin A8 family member J [Source:HGNC Symbol;Acc:HGNC:38650] | 24409 | 0.000 | -0.5247 | No |
| 52 | GOLGA8M | golgin A8 family member M [Source:HGNC Symbol;Acc:HGNC:44404] | 24410 | 0.000 | -0.5247 | No |
| 53 | GOLGA8O | golgin A8 family member O [Source:HGNC Symbol;Acc:HGNC:44406] | 24411 | 0.000 | -0.5247 | No |
| 54 | GOLGA8N | golgin A8 family member N [Source:HGNC Symbol;Acc:HGNC:44405] | 24412 | 0.000 | -0.5247 | No |
| 55 | GOLGA8Q | golgin A8 family member Q [Source:HGNC Symbol;Acc:HGNC:44408] | 24413 | 0.000 | -0.5247 | No |
| 56 | GOLGA8G | golgin A8 family member G [Source:HGNC Symbol;Acc:HGNC:25328] | 24416 | 0.000 | -0.5247 | No |
| 57 | GOLGA8F | golgin A8 family member F [Source:HGNC Symbol;Acc:HGNC:32378] | 24419 | 0.000 | -0.5248 | No |
| 58 | GOLGA8H | golgin A8 family member H [Source:HGNC Symbol;Acc:HGNC:37443] | 24420 | 0.000 | -0.5248 | No |
| 59 | CHRNA7 | cholinergic receptor nicotinic alpha 7 subunit [Source:HGNC Symbol;Acc:HGNC:1960] | 24655 | 0.000 | -0.5311 | No |
| 60 | OCA2 | OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101] | 25919 | 0.000 | -0.5652 | No |
| 61 | AC022613.1 | novel transcript, antisense to TJP1 | 26018 | 0.000 | -0.5679 | No |
| 62 | RN7SL719P | RNA, 7SL, cytoplasmic 719, pseudogene [Source:HGNC Symbol;Acc:HGNC:46735] | 26738 | 0.000 | -0.5873 | No |
| 63 | RYR3 | ryanodine receptor 3 [Source:HGNC Symbol;Acc:HGNC:10485] | 27491 | -0.024 | -0.6065 | No |
| 64 | HERC2P9 | hect domain and RLD 2 pseudogene 9 [Source:HGNC Symbol;Acc:HGNC:30495] | 28495 | -0.177 | -0.6250 | Yes |
| 65 | APBA2 | amyloid beta precursor protein binding family A member 2 [Source:HGNC Symbol;Acc:HGNC:579] | 28841 | -0.224 | -0.6235 | Yes |
| 66 | FAN1 | FANCD2 and FANCI associated nuclease 1 [Source:HGNC Symbol;Acc:HGNC:29170] | 29210 | -0.283 | -0.6198 | Yes |
| 67 | MTMR10 | myotubularin related protein 10 [Source:HGNC Symbol;Acc:HGNC:25999] | 29956 | -0.392 | -0.6209 | Yes |
| 68 | HERC2 | HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:4868] | 30310 | -0.447 | -0.6088 | Yes |
| 69 | HMGN2P5 | high mobility group nucleosomal binding domain 2 pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:33568] | 30827 | -0.531 | -0.5971 | Yes |
| 70 | HERC2P10 | hect domain and RLD 2 pseudogene 10 [Source:HGNC Symbol;Acc:HGNC:39056] | 31715 | -0.693 | -0.5875 | Yes |
| 71 | RPL5P32 | ribosomal protein L5 pseudogene 32 [Source:HGNC Symbol;Acc:HGNC:36973] | 31824 | -0.710 | -0.5560 | Yes |
| 72 | NCAPGP2 | non-SMC condensin I complex subunit G pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:51905] | 32159 | -0.799 | -0.5264 | Yes |
| 73 | TRPM1 | transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146] | 32676 | -0.937 | -0.4950 | Yes |
| 74 | KLF13 | Kruppel like factor 13 [Source:HGNC Symbol;Acc:HGNC:13672] | 34676 | -1.640 | -0.4696 | Yes |
| 75 | UBE2CP4 | ubiquitin conjugating enzyme E2 C pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:43553] | 36044 | -2.596 | -0.3809 | Yes |
| 76 | TUBBP8 | tubulin beta class I pseudogene 8 [Source:HGNC Symbol;Acc:HGNC:42179] | 36066 | -2.625 | -0.2543 | Yes |
| 77 | ARHGAP11A | Rho GTPase activating protein 11A [Source:HGNC Symbol;Acc:HGNC:15783] | 36284 | -2.829 | -0.1233 | Yes |
| 78 | ARHGAP11B | Rho GTPase activating protein 11B [Source:HGNC Symbol;Acc:HGNC:15782] | 36412 | -2.996 | 0.0183 | Yes |
