Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.Nof1.cls #KO_LPS_versus_KO_NA.Nof1.cls #KO_LPS_versus_KO_NA_repos |
| Phenotype | Nof1.cls#KO_LPS_versus_KO_NA_repos |
| Upregulated in class | KO_LPS |
| GeneSet | CHR1P35 |
| Enrichment Score (ES) | 0.46401837 |
| Normalized Enrichment Score (NES) | 1.2183222 |
| Nominal p-value | 0.03529412 |
| FDR q-value | 0.37425518 |
| FWER p-Value | 0.951 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | MARCKSL1 | MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142] | 74 | 4.266 | 0.0523 | Yes |
| 2 | PTAFR | platelet activating factor receptor [Source:HGNC Symbol;Acc:HGNC:9582] | 234 | 3.248 | 0.0894 | Yes |
| 3 | FGR | FGR proto-oncogene, Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:3697] | 246 | 3.196 | 0.1297 | Yes |
| 4 | RNF19B | ring finger protein 19B [Source:HGNC Symbol;Acc:HGNC:26886] | 257 | 3.151 | 0.1696 | Yes |
| 5 | SNORA73B | small nucleolar RNA, H/ACA box 73B [Source:HGNC Symbol;Acc:HGNC:10116] | 476 | 2.416 | 0.1944 | Yes |
| 6 | SERINC2 | serine incorporator 2 [Source:HGNC Symbol;Acc:HGNC:23231] | 557 | 2.214 | 0.2205 | Yes |
| 7 | LCK | LCK proto-oncogene, Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:6524] | 586 | 2.157 | 0.2472 | Yes |
| 8 | PHC2 | polyhomeotic homolog 2 [Source:HGNC Symbol;Acc:HGNC:3183] | 672 | 1.999 | 0.2703 | Yes |
| 9 | EYA3 | EYA transcriptional coactivator and phosphatase 3 [Source:HGNC Symbol;Acc:HGNC:3521] | 768 | 1.865 | 0.2915 | Yes |
| 10 | SESN2 | sestrin 2 [Source:HGNC Symbol;Acc:HGNC:20746] | 893 | 1.698 | 0.3098 | Yes |
| 11 | SNHG3 | small nucleolar RNA host gene 3 [Source:HGNC Symbol;Acc:HGNC:10118] | 1088 | 1.477 | 0.3233 | Yes |
| 12 | SELENOWP1 | selenoprotein W pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:10753] | 1151 | 1.427 | 0.3398 | Yes |
| 13 | SMPDL3B | sphingomyelin phosphodiesterase acid like 3B [Source:HGNC Symbol;Acc:HGNC:21416] | 1243 | 1.355 | 0.3546 | Yes |
| 14 | MECR | mitochondrial trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:19691] | 1312 | 1.309 | 0.3694 | Yes |
| 15 | HDAC1 | histone deacetylase 1 [Source:HGNC Symbol;Acc:HGNC:4852] | 1653 | 1.114 | 0.3744 | Yes |
| 16 | GAPDHP20 | glyceraldehyde 3 phosphate dehydrogenase pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:37772] | 1691 | 1.096 | 0.3874 | Yes |
| 17 | BSDC1 | BSD domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25501] | 1699 | 1.092 | 0.4011 | Yes |
| 18 | THEMIS2 | thymocyte selection associated family member 2 [Source:HGNC Symbol;Acc:HGNC:16839] | 1957 | 0.965 | 0.4064 | Yes |
| 19 | ATP5IF1 | ATP synthase inhibitory factor subunit 1 [Source:HGNC Symbol;Acc:HGNC:871] | 2035 | 0.927 | 0.4161 | Yes |
| 20 | AHDC1 | AT-hook DNA binding motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25230] | 2042 | 0.926 | 0.4277 | Yes |
| 21 | TAF12 | TATA-box binding protein associated factor 12 [Source:HGNC Symbol;Acc:HGNC:11545] | 2155 | 0.873 | 0.4358 | Yes |
| 22 | STX12 | syntaxin 12 [Source:HGNC Symbol;Acc:HGNC:11430] | 2222 | 0.848 | 0.4448 | Yes |
| 23 | ZCCHC17 | zinc finger CCHC-type containing 17 [Source:HGNC Symbol;Acc:HGNC:30246] | 2402 | 0.777 | 0.4499 | Yes |
| 24 | SNHG12 | small nucleolar RNA host gene 12 [Source:HGNC Symbol;Acc:HGNC:30062] | 2452 | 0.760 | 0.4582 | Yes |
| 25 | NKAIN1 | sodium/potassium transporting ATPase interacting 1 [Source:HGNC Symbol;Acc:HGNC:25743] | 2677 | 0.682 | 0.4609 | Yes |
| 26 | TXLNA | taxilin alpha [Source:HGNC Symbol;Acc:HGNC:30685] | 2991 | 0.604 | 0.4601 | Yes |
| 27 | HPCA | hippocalcin [Source:HGNC Symbol;Acc:HGNC:5144] | 3116 | 0.573 | 0.4640 | Yes |
| 28 | KPNA6 | karyopherin subunit alpha 6 [Source:HGNC Symbol;Acc:HGNC:6399] | 3645 | 0.450 | 0.4555 | No |
| 29 | GMEB1 | glucocorticoid modulatory element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:4370] | 3838 | 0.413 | 0.4555 | No |
| 30 | RCC1 | regulator of chromosome condensation 1 [Source:HGNC Symbol;Acc:HGNC:1913] | 4226 | 0.334 | 0.4493 | No |
| 31 | PUM1 | pumilio RNA binding family member 1 [Source:HGNC Symbol;Acc:HGNC:14957] | 4293 | 0.320 | 0.4516 | No |
| 32 | ZSCAN20 | zinc finger and SCAN domain containing 20 [Source:HGNC Symbol;Acc:HGNC:13093] | 4507 | 0.277 | 0.4494 | No |
| 33 | YARS1 | tyrosyl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:12840] | 4604 | 0.255 | 0.4500 | No |
| 34 | FNDC5 | fibronectin type III domain containing 5 [Source:HGNC Symbol;Acc:HGNC:20240] | 4642 | 0.244 | 0.4521 | No |
| 35 | SPCS2P4 | signal peptidase complex subunit 2 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:45237] | 5233 | 0.144 | 0.4380 | No |
| 36 | SRSF4 | serine and arginine rich splicing factor 4 [Source:HGNC Symbol;Acc:HGNC:10786] | 5939 | 0.005 | 0.4190 | No |
| 37 | RNU6-176P | RNA, U6 small nuclear 176, pseudogene [Source:HGNC Symbol;Acc:HGNC:47139] | 6724 | 0.000 | 0.3978 | No |
| 38 | LINC01648 | long intergenic non-protein coding RNA 1648 [Source:HGNC Symbol;Acc:HGNC:52435] | 6921 | 0.000 | 0.3925 | No |
| 39 | SCARNA1 | small Cajal body-specific RNA 1 [Source:HGNC Symbol;Acc:HGNC:32555] | 7462 | 0.000 | 0.3779 | No |
| 40 | HSPD1P14 | heat shock protein family D (Hsp60) member 1 pseudogene 14 [Source:HGNC Symbol;Acc:HGNC:35143] | 8066 | 0.000 | 0.3616 | No |
| 41 | LINC01226 | long intergenic non-protein coding RNA 1226 [Source:HGNC Symbol;Acc:HGNC:49678] | 8168 | 0.000 | 0.3588 | No |
| 42 | CSMD2-AS1 | CSMD2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40882] | 8489 | 0.000 | 0.3502 | No |
| 43 | TINAGL1 | tubulointerstitial nephritis antigen like 1 [Source:HGNC Symbol;Acc:HGNC:19168] | 8501 | 0.000 | 0.3499 | No |
| 44 | OPRD1 | opioid receptor delta 1 [Source:HGNC Symbol;Acc:HGNC:8153] | 8677 | 0.000 | 0.3451 | No |
| 45 | MIR4420 | microRNA 4420 [Source:HGNC Symbol;Acc:HGNC:41772] | 8885 | 0.000 | 0.3395 | No |
| 46 | HCRTR1 | hypocretin receptor 1 [Source:HGNC Symbol;Acc:HGNC:4848] | 8912 | 0.000 | 0.3388 | No |
| 47 | RNU6-949P | RNA, U6 small nuclear 949, pseudogene [Source:HGNC Symbol;Acc:HGNC:47912] | 9217 | 0.000 | 0.3306 | No |
| 48 | TLR12P | toll like receptor 12, pseudogene [Source:HGNC Symbol;Acc:HGNC:31754] | 9396 | 0.000 | 0.3258 | No |
| 49 | A3GALT2 | alpha 1,3-galactosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:30005] | 11899 | 0.000 | 0.2581 | No |
| 50 | MTMR9LP | myotubularin related protein 9 like, pseudogene [Source:HGNC Symbol;Acc:HGNC:27920] | 15210 | 0.000 | 0.1686 | No |
| 51 | RN7SL559P | RNA, 7SL, cytoplasmic 559, pseudogene [Source:HGNC Symbol;Acc:HGNC:46575] | 15610 | 0.000 | 0.1578 | No |
| 52 | SNORA44 | small nucleolar RNA, H/ACA box 44 [Source:HGNC Symbol;Acc:HGNC:32637] | 16056 | 0.000 | 0.1458 | No |
| 53 | CSMD2 | CUB and Sushi multiple domains 2 [Source:HGNC Symbol;Acc:HGNC:19290] | 16100 | 0.000 | 0.1446 | No |
| 54 | TMEM200B | transmembrane protein 200B [Source:HGNC Symbol;Acc:HGNC:33785] | 16269 | 0.000 | 0.1400 | No |
| 55 | RNU6-424P | RNA, U6 small nuclear 424, pseudogene [Source:HGNC Symbol;Acc:HGNC:47387] | 16279 | 0.000 | 0.1398 | No |
| 56 | COL16A1 | collagen type XVI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2193] | 16401 | 0.000 | 0.1365 | No |
| 57 | SYNC | syncoilin, intermediate filament protein [Source:HGNC Symbol;Acc:HGNC:28897] | 16843 | 0.000 | 0.1246 | No |
| 58 | SPOCD1 | SPOC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26338] | 16907 | 0.000 | 0.1229 | No |
| 59 | RAB42 | RAB42, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:28702] | 17102 | 0.000 | 0.1176 | No |
| 60 | RNU6ATAC27P | RNA, U6atac small nuclear 27, pseudogene [Source:HGNC Symbol;Acc:HGNC:46926] | 17913 | 0.000 | 0.0957 | No |
| 61 | RN7SL122P | RNA, 7SL, cytoplasmic 122, pseudogene [Source:HGNC Symbol;Acc:HGNC:46138] | 18053 | 0.000 | 0.0920 | No |
| 62 | RN7SKP16 | RN7SK pseudogene 16 [Source:HGNC Symbol;Acc:HGNC:45740] | 18537 | 0.000 | 0.0789 | No |
| 63 | RN7SKP91 | RN7SK pseudogene 91 [Source:HGNC Symbol;Acc:HGNC:45815] | 18638 | 0.000 | 0.0762 | No |
| 64 | FAM229A | family with sequence similarity 229 member A [Source:HGNC Symbol;Acc:HGNC:44652] | 18841 | 0.000 | 0.0707 | No |
| 65 | LINC01756 | long intergenic non-protein coding RNA 1756 [Source:HGNC Symbol;Acc:HGNC:52545] | 19842 | 0.000 | 0.0437 | No |
| 66 | LINC01715 | long intergenic non-protein coding RNA 1715 [Source:HGNC Symbol;Acc:HGNC:52502] | 19908 | 0.000 | 0.0419 | No |
| 67 | LINC01778 | long intergenic non-protein coding RNA 1778 [Source:HGNC Symbol;Acc:HGNC:52568] | 19984 | 0.000 | 0.0399 | No |
| 68 | TMEM54 | transmembrane protein 54 [Source:HGNC Symbol;Acc:HGNC:24143] | 20169 | 0.000 | 0.0349 | No |
| 69 | RN7SL371P | RNA, 7SL, cytoplasmic 371, pseudogene [Source:HGNC Symbol;Acc:HGNC:46387] | 20528 | 0.000 | 0.0252 | No |
| 70 | IFI6 | interferon alpha inducible protein 6 [Source:HGNC Symbol;Acc:HGNC:4054] | 20640 | 0.000 | 0.0222 | No |
| 71 | MIR5585 | microRNA 5585 [Source:HGNC Symbol;Acc:HGNC:43452] | 21852 | 0.000 | -0.0105 | No |
| 72 | SNORD99 | small nucleolar RNA, C/D box 99 [Source:HGNC Symbol;Acc:HGNC:32762] | 22295 | 0.000 | -0.0225 | No |
| 73 | MIR3605 | microRNA 3605 [Source:HGNC Symbol;Acc:HGNC:38922] | 22362 | 0.000 | -0.0243 | No |
| 74 | RNU6-40P | RNA, U6 small nuclear 40, pseudogene [Source:HGNC Symbol;Acc:HGNC:34248] | 22413 | 0.000 | -0.0256 | No |
| 75 | HMGB4 | high mobility group box 4 [Source:HGNC Symbol;Acc:HGNC:24954] | 23560 | 0.000 | -0.0566 | No |
| 76 | ADGRB2 | adhesion G protein-coupled receptor B2 [Source:HGNC Symbol;Acc:HGNC:944] | 24113 | 0.000 | -0.0715 | No |
| 77 | C1orf94 | chromosome 1 open reading frame 94 [Source:HGNC Symbol;Acc:HGNC:28250] | 24237 | 0.000 | -0.0749 | No |
| 78 | RNU6-1245P | RNA, U6 small nuclear 1245, pseudogene [Source:HGNC Symbol;Acc:HGNC:48208] | 26009 | 0.000 | -0.1228 | No |
| 79 | RNA5SP42 | RNA, 5S ribosomal pseudogene 42 [Source:HGNC Symbol;Acc:HGNC:42818] | 26047 | 0.000 | -0.1238 | No |
| 80 | MIR4254 | microRNA 4254 [Source:HGNC Symbol;Acc:HGNC:38193] | 26065 | 0.000 | -0.1242 | No |
| 81 | MATN1-AS1 | MATN1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40364] | 26219 | 0.000 | -0.1284 | No |
| 82 | ZBTB8B | zinc finger and BTB domain containing 8B [Source:HGNC Symbol;Acc:HGNC:37057] | 26703 | 0.000 | -0.1414 | No |
| 83 | LRRC37A12P | leucine rich repeat containing 37 member A12, pseudogene [Source:HGNC Symbol;Acc:HGNC:43816] | 27341 | 0.000 | -0.1587 | No |
| 84 | SNRNP40 | small nuclear ribonucleoprotein U5 subunit 40 [Source:HGNC Symbol;Acc:HGNC:30857] | 27374 | -0.000 | -0.1595 | No |
| 85 | YTHDF2 | YTH N6-methyladenosine RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:31675] | 27523 | -0.029 | -0.1632 | No |
| 86 | PRDX3P2 | peroxiredoxin 3 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:39265] | 27719 | -0.065 | -0.1676 | No |
| 87 | PTPRU | protein tyrosine phosphatase receptor type U [Source:HGNC Symbol;Acc:HGNC:9683] | 28482 | -0.175 | -0.1860 | No |
| 88 | XKR8 | XK related 8 [Source:HGNC Symbol;Acc:HGNC:25508] | 28522 | -0.181 | -0.1847 | No |
| 89 | TSSK3 | testis specific serine kinase 3 [Source:HGNC Symbol;Acc:HGNC:15473] | 28662 | -0.197 | -0.1860 | No |
| 90 | DCDC2B | doublecortin domain containing 2B [Source:HGNC Symbol;Acc:HGNC:32576] | 28682 | -0.200 | -0.1840 | No |
| 91 | TRNAU1AP | tRNA selenocysteine 1 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:30813] | 29146 | -0.271 | -0.1930 | No |
| 92 | TMEM39B | transmembrane protein 39B [Source:HGNC Symbol;Acc:HGNC:25510] | 29179 | -0.278 | -0.1904 | No |
| 93 | MED18 | mediator complex subunit 18 [Source:HGNC Symbol;Acc:HGNC:25944] | 29367 | -0.306 | -0.1915 | No |
| 94 | PEF1 | penta-EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30009] | 29421 | -0.314 | -0.1890 | No |
| 95 | MATN1 | matrilin 1 [Source:HGNC Symbol;Acc:HGNC:6907] | 29762 | -0.364 | -0.1935 | No |
| 96 | EIF3I | eukaryotic translation initiation factor 3 subunit I [Source:HGNC Symbol;Acc:HGNC:3272] | 29875 | -0.379 | -0.1917 | No |
| 97 | CHMP1AP1 | charged multivesicular body protein 1A pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:39514] | 30194 | -0.429 | -0.1949 | No |
| 98 | RPEP3 | ribulose-5-phosphate-3-epimerase pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:44522] | 30571 | -0.488 | -0.1988 | No |
| 99 | PHACTR4 | phosphatase and actin regulator 4 [Source:HGNC Symbol;Acc:HGNC:25793] | 30599 | -0.494 | -0.1933 | No |
| 100 | PPP1R8 | protein phosphatase 1 regulatory subunit 8 [Source:HGNC Symbol;Acc:HGNC:9296] | 30658 | -0.504 | -0.1884 | No |
| 101 | KHDRBS1 | KH RNA binding domain containing, signal transduction associated 1 [Source:HGNC Symbol;Acc:HGNC:18116] | 31002 | -0.559 | -0.1906 | No |
| 102 | FABP3 | fatty acid binding protein 3 [Source:HGNC Symbol;Acc:HGNC:3557] | 31205 | -0.596 | -0.1885 | No |
| 103 | AK2 | adenylate kinase 2 [Source:HGNC Symbol;Acc:HGNC:362] | 31265 | -0.605 | -0.1824 | No |
| 104 | PTP4A2 | protein tyrosine phosphatase 4A2 [Source:HGNC Symbol;Acc:HGNC:9635] | 31507 | -0.653 | -0.1806 | No |
| 105 | ZBTB8OS | zinc finger and BTB domain containing 8 opposite strand [Source:HGNC Symbol;Acc:HGNC:24094] | 32211 | -0.812 | -0.1892 | No |
| 106 | TMEM234 | transmembrane protein 234 [Source:HGNC Symbol;Acc:HGNC:28837] | 32745 | -0.957 | -0.1915 | No |
| 107 | AZIN2 | antizyme inhibitor 2 [Source:HGNC Symbol;Acc:HGNC:29957] | 32850 | -0.990 | -0.1817 | No |
| 108 | EPB41 | erythrocyte membrane protein band 4.1 [Source:HGNC Symbol;Acc:HGNC:3377] | 32995 | -1.036 | -0.1724 | No |
| 109 | IQCC | IQ motif containing C [Source:HGNC Symbol;Acc:HGNC:25545] | 33016 | -1.041 | -0.1597 | No |
| 110 | RBBP4 | RB binding protein 4, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:9887] | 33117 | -1.069 | -0.1488 | No |
| 111 | FAM76A | family with sequence similarity 76 member A [Source:HGNC Symbol;Acc:HGNC:28530] | 33286 | -1.125 | -0.1390 | No |
| 112 | ZNF362 | zinc finger protein 362 [Source:HGNC Symbol;Acc:HGNC:18079] | 33737 | -1.278 | -0.1349 | No |
| 113 | TRIM62 | tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574] | 33818 | -1.309 | -0.1204 | No |
| 114 | DNAJC8 | DnaJ heat shock protein family (Hsp40) member C8 [Source:HGNC Symbol;Acc:HGNC:15470] | 34144 | -1.426 | -0.1110 | No |
| 115 | RPA2 | replication protein A2 [Source:HGNC Symbol;Acc:HGNC:10290] | 34180 | -1.439 | -0.0937 | No |
| 116 | S100PBP | S100P binding protein [Source:HGNC Symbol;Acc:HGNC:25768] | 34330 | -1.500 | -0.0786 | No |
| 117 | CCDC28B | coiled-coil domain containing 28B [Source:HGNC Symbol;Acc:HGNC:28163] | 34656 | -1.627 | -0.0667 | No |
| 118 | SDC3 | syndecan 3 [Source:HGNC Symbol;Acc:HGNC:10660] | 35056 | -1.837 | -0.0541 | No |
| 119 | ZBTB8A | zinc finger and BTB domain containing 8A [Source:HGNC Symbol;Acc:HGNC:24172] | 35171 | -1.915 | -0.0328 | No |
| 120 | KIAA1522 | KIAA1522 [Source:HGNC Symbol;Acc:HGNC:29301] | 35180 | -1.920 | -0.0085 | No |
| 121 | FAM167B | family with sequence similarity 167 member B [Source:HGNC Symbol;Acc:HGNC:28133] | 35548 | -2.157 | 0.0090 | No |
| 122 | LAPTM5 | lysosomal protein transmembrane 5 [Source:HGNC Symbol;Acc:HGNC:29612] | 36018 | -2.568 | 0.0290 | No |
