Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.Nof1.cls #KO_LPS_versus_KO_NA.Nof1.cls #KO_LPS_versus_KO_NA_repos |
| Phenotype | Nof1.cls#KO_LPS_versus_KO_NA_repos |
| Upregulated in class | KO_NA |
| GeneSet | CHR3P12 |
| Enrichment Score (ES) | -0.650012 |
| Normalized Enrichment Score (NES) | -1.2799067 |
| Nominal p-value | 0.07608695 |
| FDR q-value | 0.57752776 |
| FWER p-Value | 1.0 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | OSBPL9P1 | oxysterol binding protein like 9 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:48731] | 1008 | 1.567 | 0.0661 | No |
| 2 | NIPA2P2 | NIPA2 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:42042] | 3914 | 0.397 | 0.0112 | No |
| 3 | CYP51A1P1 | cytochrome P450 family 51 subfamily A member 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:20245] | 4161 | 0.350 | 0.0254 | No |
| 4 | CADM2 | cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:29849] | 4571 | 0.262 | 0.0300 | No |
| 5 | RPS3AP15 | RPS3A pseudogene 15 [Source:HGNC Symbol;Acc:HGNC:35781] | 5819 | 0.028 | -0.0021 | No |
| 6 | FRG2C | FSHD region gene 2 family member C [Source:HGNC Symbol;Acc:HGNC:33626] | 6305 | 0.000 | -0.0152 | No |
| 7 | RNU2-28P | RNA, U2 small nuclear 28, pseudogene [Source:HGNC Symbol;Acc:HGNC:48521] | 7687 | 0.000 | -0.0525 | No |
| 8 | RNU6-386P | RNA, U6 small nuclear 386, pseudogene [Source:HGNC Symbol;Acc:HGNC:47349] | 7739 | 0.000 | -0.0539 | No |
| 9 | RN7SL294P | RNA, 7SL, cytoplasmic 294, pseudogene [Source:HGNC Symbol;Acc:HGNC:46310] | 7746 | 0.000 | -0.0540 | No |
| 10 | CLUHP10 | clustered mitochondria homolog pseudogene 10 [Source:HGNC Symbol;Acc:HGNC:51574] | 7823 | 0.000 | -0.0561 | No |
| 11 | AGGF1P3 | angiogenic factor with G-patch and FHA domains 1 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:38053] | 7864 | 0.000 | -0.0572 | No |
| 12 | OR7E121P | olfactory receptor family 7 subfamily E member 121 pseudogene [Source:HGNC Symbol;Acc:HGNC:15049] | 8302 | 0.000 | -0.0690 | No |
| 13 | CNTN3 | contactin 3 [Source:HGNC Symbol;Acc:HGNC:2173] | 9071 | 0.000 | -0.0897 | No |
| 14 | MYLKP1 | myosin light chain kinase pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:7591] | 10195 | 0.000 | -0.1200 | No |
| 15 | LSP1P2 | LSP1 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:39717] | 10258 | 0.000 | -0.1217 | No |
| 16 | RN7SL647P | RNA, 7SL, cytoplasmic 647, pseudogene [Source:HGNC Symbol;Acc:HGNC:46663] | 10694 | 0.000 | -0.1334 | No |
| 17 | CADM2-AS1 | CADM2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:41248] | 11767 | 0.000 | -0.1624 | No |
| 18 | CADM2-AS2 | CADM2 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:41247] | 11768 | 0.000 | -0.1624 | No |
| 19 | LINC00971 | long intergenic non-protein coding RNA 971 [Source:HGNC Symbol;Acc:HGNC:48737] | 11778 | 0.000 | -0.1626 | No |
| 20 | LINC00960 | long intergenic non-protein coding RNA 960 [Source:HGNC Symbol;Acc:HGNC:48710] | 11792 | 0.000 | -0.1630 | No |
| 21 | MIR1324 | microRNA 1324 [Source:HGNC Symbol;Acc:HGNC:35377] | 12219 | 0.000 | -0.1745 | No |
| 22 | ENPP7P2 | ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:48685] | 13070 | 0.000 | -0.1974 | No |
| 23 | MRPS17P3 | mitochondrial ribosomal protein S17 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:29736] | 13876 | 0.000 | -0.2192 | No |
| 24 | SRRM1P2 | serine/arginine repetitive matrix 1 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:38163] | 13919 | 0.000 | -0.2203 | No |
| 25 | VGLL3 | vestigial like family member 3 [Source:HGNC Symbol;Acc:HGNC:24327] | 14099 | 0.000 | -0.2252 | No |
| 26 | MIR5688 | microRNA 5688 [Source:HGNC Symbol;Acc:HGNC:43463] | 15247 | 0.000 | -0.2561 | No |
| 27 | RN7SKP284 | RN7SK pseudogene 284 [Source:HGNC Symbol;Acc:HGNC:46008] | 17948 | 0.000 | -0.3290 | No |
| 28 | RNU6-217P | RNA, U6 small nuclear 217, pseudogene [Source:HGNC Symbol;Acc:HGNC:47180] | 17973 | 0.000 | -0.3297 | No |
| 29 | DUX4L26 | double homeobox 4 like 26 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:50807] | 18548 | 0.000 | -0.3452 | No |
| 30 | RN7SKP61 | RN7SK pseudogene 61 [Source:HGNC Symbol;Acc:HGNC:45785] | 18681 | 0.000 | -0.3488 | No |
| 31 | OR7E22P | olfactory receptor family 7 subfamily E member 22 pseudogene [Source:HGNC Symbol;Acc:HGNC:8394] | 20240 | 0.000 | -0.3908 | No |
| 32 | MIR3923 | microRNA 3923 [Source:HGNC Symbol;Acc:HGNC:38978] | 20785 | 0.000 | -0.4055 | No |
| 33 | LINC02027 | long intergenic non-protein coding RNA 2027 [Source:HGNC Symbol;Acc:HGNC:52862] | 21367 | 0.000 | -0.4212 | No |
| 34 | LINC02050 | long intergenic non-protein coding RNA 2050 [Source:HGNC Symbol;Acc:HGNC:52890] | 21401 | 0.000 | -0.4221 | No |
| 35 | LINC02025 | long intergenic non-protein coding RNA 2025 [Source:HGNC Symbol;Acc:HGNC:52860] | 21432 | 0.000 | -0.4229 | No |
| 36 | LINC02018 | long intergenic non-protein coding RNA 2018 [Source:HGNC Symbol;Acc:HGNC:52853] | 21449 | 0.000 | -0.4234 | No |
| 37 | LINC02008 | long intergenic non-protein coding RNA 2008 [Source:HGNC Symbol;Acc:HGNC:52844] | 21463 | 0.000 | -0.4237 | No |
| 38 | LINC02077 | long intergenic non-protein coding RNA 2077 [Source:HGNC Symbol;Acc:HGNC:52925] | 21547 | 0.000 | -0.4259 | No |
| 39 | LINC02070 | long intergenic non-protein coding RNA 2070 [Source:HGNC Symbol;Acc:HGNC:52916] | 21554 | 0.000 | -0.4261 | No |
| 40 | RNU6-1129P | RNA, U6 small nuclear 1129, pseudogene [Source:HGNC Symbol;Acc:HGNC:48092] | 22187 | 0.000 | -0.4432 | No |
| 41 | ROBO2 | roundabout guidance receptor 2 [Source:HGNC Symbol;Acc:HGNC:10250] | 22566 | 0.000 | -0.4534 | No |
| 42 | ROBO1 | roundabout guidance receptor 1 [Source:HGNC Symbol;Acc:HGNC:10249] | 22573 | 0.000 | -0.4535 | No |
| 43 | RARRES2P1 | retinoic acid receptor responder 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:48700] | 22777 | 0.000 | -0.4590 | No |
| 44 | RPL7AP23 | ribosomal protein L7a pseudogene 23 [Source:HGNC Symbol;Acc:HGNC:36884] | 23631 | 0.000 | -0.4821 | No |
| 45 | LINC00506 | long intergenic non-protein coding RNA 506 [Source:NCBI gene (formerly Entrezgene);Acc:100846978] | 23983 | 0.000 | -0.4915 | No |
| 46 | RPL23AP49 | ribosomal protein L23a pseudogene 49 [Source:HGNC Symbol;Acc:HGNC:35689] | 25645 | 0.000 | -0.5364 | No |
| 47 | RN7SL751P | RNA, 7SL, cytoplasmic 751, pseudogene [Source:HGNC Symbol;Acc:HGNC:46767] | 25799 | 0.000 | -0.5405 | No |
| 48 | MIR4273 | microRNA 4273 [Source:HGNC Symbol;Acc:HGNC:38339] | 26169 | 0.000 | -0.5505 | No |
| 49 | SETP6 | SET pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:42925] | 29855 | -0.377 | -0.6276 | Yes |
| 50 | ZNF717 | zinc finger protein 717 [Source:HGNC Symbol;Acc:HGNC:29448] | 30532 | -0.483 | -0.6171 | Yes |
| 51 | UNC93B3 | unc-93 homolog B3 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:13483] | 30821 | -0.531 | -0.5933 | Yes |
| 52 | THAP12P2 | THAP domain containing 12 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:39566] | 30859 | -0.537 | -0.5623 | Yes |
| 53 | HMGB1P38 | high mobility group box 1 pseudogene 38 [Source:HGNC Symbol;Acc:HGNC:39185] | 31112 | -0.579 | -0.5347 | Yes |
| 54 | SNRPCP10 | small nuclear ribonucleoprotein polypeptide C pseudogene 10 [Source:HGNC Symbol;Acc:HGNC:49825] | 31557 | -0.662 | -0.5073 | Yes |
| 55 | FAM86DP | family with sequence similarity 86 member D, pseudogene [Source:HGNC Symbol;Acc:HGNC:32659] | 31915 | -0.734 | -0.4732 | Yes |
| 56 | HNRNPA3P8 | heterogeneous nuclear ribonucleoprotein A3 pseudogene 8 [Source:HGNC Symbol;Acc:HGNC:48497] | 32299 | -0.840 | -0.4336 | Yes |
| 57 | PPATP1 | phosphoribosyl pyrophosphate amidotransferase pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:9239] | 32807 | -0.976 | -0.3892 | Yes |
| 58 | ALG1L6P | ALG1 like 6, pseudogene [Source:HGNC Symbol;Acc:HGNC:44375] | 33079 | -1.056 | -0.3336 | Yes |
| 59 | HNRNPA3P6 | heterogeneous nuclear ribonucleoprotein A3 pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:48495] | 33546 | -1.209 | -0.2742 | Yes |
| 60 | AKR1B1P2 | aldo-keto reductase family 1 member B1 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:425] | 33775 | -1.292 | -0.2035 | Yes |
| 61 | VDAC1P7 | voltage dependent anion channel 1 pseudogene 7 [Source:HGNC Symbol;Acc:HGNC:37482] | 35513 | -2.133 | -0.1234 | Yes |
| 62 | GBE1 | 1,4-alpha-glucan branching enzyme 1 [Source:HGNC Symbol;Acc:HGNC:4180] | 36242 | -2.788 | 0.0229 | Yes |
